RNA–Protein interactions for RNA: ENST00000538809.6

RAB40B-202, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-202ENST00000538809 VCX3BQ9H321 246 aa11.92□□□□□ -0.5
RAB40B-202ENST00000538809 SPACA1Q9HBV2 294 aa11.92□□□□□ -0.5
RAB40B-202ENST00000538809 ISYNA1Q9NPH2 558 aa11.92□□□□□ -0.5
RAB40B-202ENST00000538809 GHRLQ9UBU3 117 aa11.92□□□□□ -0.5
RAB40B-202ENST00000538809 MOB4Q9Y3A3 225 aa11.92□□□□□ -0.5
RAB40B-202ENST00000538809 SDCBPO00560 298 aaPredicted RBP11.91□□□□□ -0.5
RAB40B-202ENST00000538809 ORC5O43913 435 aa11.91□□□□□ -0.5
RAB40B-202ENST00000538809 GZMHP20718 246 aa11.91□□□□□ -0.5
RAB40B-202ENST00000538809 VHLP40337 213 aa11.91□□□□□ -0.5
RAB40B-202ENST00000538809 REG1BP48304 166 aa11.91□□□□□ -0.5
RAB40B-202ENST00000538809 HSPA13P48723 471 aa11.91□□□□□ -0.5
RAB40B-202ENST00000538809 LOXL3P58215 753 aa11.91□□□□□ -0.5
RAB40B-202ENST00000538809 HES1Q14469 280 aa11.91□□□□□ -0.5
RAB40B-202ENST00000538809 BEAN1Q3B7T3 259 aa11.91□□□□□ -0.5
RAB40B-202ENST00000538809 SAMD5Q5TGI4 173 aa11.91□□□□□ -0.5
RAB40B-202ENST00000538809 LIPKQ5VXJ0 399 aa11.91□□□□□ -0.5
RAB40B-202ENST00000538809 TMEM91Q6ZNR0 172 aa11.91□□□□□ -0.5
RAB40B-202ENST00000538809 CENPVQ7Z7K6 275 aaPredicted RBP11.91□□□□□ -0.5
RAB40B-202ENST00000538809 OR52M1Q8NGK5 317 aa11.91□□□□□ -0.5
RAB40B-202ENST00000538809 UFD1Q92890 307 aa11.91□□□□□ -0.5
RAB40B-202ENST00000538809 SELENOIQ9C0D9 397 aa11.91□□□□□ -0.5
RAB40B-202ENST00000538809 HSD17B6O14756 317 aa11.9□□□□□ -0.5
RAB40B-202ENST00000538809 CRTAPO75718 401 aaPredicted RBP11.9□□□□□ -0.5
RAB40B-202ENST00000538809 IGKV1D-33P01593 117 aa11.9□□□□□ -0.5
RAB40B-202ENST00000538809 IGKV1-33P01594 117 aa11.9□□□□□ -0.5
RAB40B-202ENST00000538809 PRB2P02812 416 aaPredicted RBP11.9□□□□□ -0.5
RAB40B-202ENST00000538809 GLAP06280 429 aa11.9□□□□□ -0.5
RAB40B-202ENST00000538809 FAM106CPP0CH98 169 aa11.9□□□□□ -0.5
RAB40B-202ENST00000538809 TMEM11P17152 192 aa11.9□□□□□ -0.5
RAB40B-202ENST00000538809 SRMP19623 302 aa11.9□□□□□ -0.5
RAB40B-202ENST00000538809 RPS25P62851 125 aaKnown RBP11.9□□□□□ -0.5
RAB40B-202ENST00000538809 EMX1Q04741 257 aaPredicted RBP11.9□□□□□ -0.5
RAB40B-202ENST00000538809 MLLT11Q13015 90 aaPredicted RBP11.9□□□□□ -0.5
RAB40B-202ENST00000538809 HNF4GQ14541 408 aa11.9□□□□□ -0.5
RAB40B-202ENST00000538809 HSD17B12Q53GQ0 312 aa11.9□□□□□ -0.5
RAB40B-202ENST00000538809 TCTEX1D4Q5JR98 221 aa11.9□□□□□ -0.5
RAB40B-202ENST00000538809 RBM48Q5RL73 367 aaKnown RBP11.9□□□□□ -0.5
RAB40B-202ENST00000538809 RAB12Q6IQ22 244 aa11.9□□□□□ -0.5
RAB40B-202ENST00000538809 CEACAM19Q7Z692 300 aa11.9□□□□□ -0.5
RAB40B-202ENST00000538809 LINC00311Q8N616 119 aa11.9□□□□□ -0.5
RAB40B-202ENST00000538809 OR4F17Q8NGA8 305 aa11.9□□□□□ -0.5
RAB40B-202ENST00000538809 OR4K15Q8NH41 348 aa11.9□□□□□ -0.5
RAB40B-202ENST00000538809 FAM46BQ96A09 425 aa11.9□□□□□ -0.5
RAB40B-202ENST00000538809 OR4F4Q96R69 305 aa11.9□□□□□ -0.5
RAB40B-202ENST00000538809 GFI1Q99684 422 aa11.9□□□□□ -0.5
RAB40B-202ENST00000538809 GFOD1Q9NXC2 390 aa11.9□□□□□ -0.5
RAB40B-202ENST00000538809 ETAA1Q9NY74 926 aa11.9□□□□□ -0.5
RAB40B-202ENST00000538809 IGHV3-72A0A0B4J1Y9 119 aa11.89□□□□□ -0.51
RAB40B-202ENST00000538809 C12orf77C9JDV5 145 aa11.89□□□□□ -0.51
RAB40B-202ENST00000538809 MCRIP1C9JLW8 97 aa11.89□□□□□ -0.51
RAB40B-202ENST00000538809 SLC22A1O15245 554 aa11.89□□□□□ -0.51
RAB40B-202ENST00000538809 ATP6V1G2O95670 118 aa11.89□□□□□ -0.51
RAB40B-202ENST00000538809 UBBP0CG47 229 aa11.89□□□□□ -0.51
RAB40B-202ENST00000538809 VSIG8P0DPA2 414 aa11.89□□□□□ -0.51
RAB40B-202ENST00000538809 CPEP16870 476 aa11.89□□□□□ -0.51
RAB40B-202ENST00000538809 FUT3P21217 361 aa11.89□□□□□ -0.51
RAB40B-202ENST00000538809 MAP2K4P45985 399 aa11.89□□□□□ -0.51
RAB40B-202ENST00000538809 RAB7AP51149 207 aa11.89□□□□□ -0.51
RAB40B-202ENST00000538809 QRFPP83859 136 aa11.89□□□□□ -0.51
RAB40B-202ENST00000538809 CD83Q01151 205 aa11.89□□□□□ -0.51
RAB40B-202ENST00000538809 KHDC1LQ5JSQ8 128 aa11.89□□□□□ -0.51
RAB40B-202ENST00000538809 GLT8D1Q68CQ7 371 aa11.89□□□□□ -0.51
RAB40B-202ENST00000538809 OR8H3Q8N146 312 aa11.89□□□□□ -0.51
RAB40B-202ENST00000538809 PRR18Q8N4B5 295 aa11.89□□□□□ -0.51
RAB40B-202ENST00000538809 C8orf31Q8N9H6 132 aa11.89□□□□□ -0.51
RAB40B-202ENST00000538809 TRAPPC2LQ9UL33 140 aa11.89□□□□□ -0.51
RAB40B-202ENST00000538809 RAB26Q9ULW5 256 aa11.89□□□□□ -0.51
RAB40B-202ENST00000538809 PEX16Q9Y5Y5 336 aa11.89□□□□□ -0.51
RAB40B-202ENST00000538809 TCRBV4S1A1TA0A5B7 111 aa11.88□□□□□ -0.51
RAB40B-202ENST00000538809 UBE2QL1A1L167 161 aa11.88□□□□□ -0.51
RAB40B-202ENST00000538809 TMEM14DPA8MWL7 114 aa11.88□□□□□ -0.51
RAB40B-202ENST00000538809 M0QZK8 103 aa11.88□□□□□ -0.51
RAB40B-202ENST00000538809 CCRL2O00421 344 aa11.88□□□□□ -0.51
RAB40B-202ENST00000538809 SLC31A2O15432 143 aa11.88□□□□□ -0.51
RAB40B-202ENST00000538809 PDCD6O75340 191 aa11.88□□□□□ -0.51
RAB40B-202ENST00000538809 CA11O75493 328 aa11.88□□□□□ -0.51
RAB40B-202ENST00000538809 ZNF816Q0VGE8 651 aaPredicted RBP11.88□□□□□ -0.51
RAB40B-202ENST00000538809 UNC119Q13432 240 aa11.88□□□□□ -0.51
RAB40B-202ENST00000538809 TBCEQ15813 527 aaPredicted RBP11.88□□□□□ -0.51
RAB40B-202ENST00000538809 Q3ZCU0 254 aa11.88□□□□□ -0.51
RAB40B-202ENST00000538809 OXLD1Q5BKU9 147 aa11.88□□□□□ -0.51
RAB40B-202ENST00000538809 SYT6Q5T7P8 510 aaPredicted RBP11.88□□□□□ -0.51
RAB40B-202ENST00000538809 OR10K2Q6IF99 312 aa11.88□□□□□ -0.51
RAB40B-202ENST00000538809 MOB3BQ86TA1 216 aa11.88□□□□□ -0.51
RAB40B-202ENST00000538809 THNSL2Q86YJ6 484 aa11.88□□□□□ -0.51
RAB40B-202ENST00000538809 C5orf56Q8N8D9 126 aa11.88□□□□□ -0.51
RAB40B-202ENST00000538809 ZNF439Q8NDP4 499 aa11.88□□□□□ -0.51
RAB40B-202ENST00000538809 OR4X2Q8NGF9 303 aa11.88□□□□□ -0.51
RAB40B-202ENST00000538809 OR10V1Q8NGI7 309 aa11.88□□□□□ -0.51
RAB40B-202ENST00000538809 TMEM203Q969S6 136 aa11.88□□□□□ -0.51
RAB40B-202ENST00000538809 CNBD2Q96M20 576 aa11.88□□□□□ -0.51
RAB40B-202ENST00000538809 TM2D1Q9BX74 207 aa11.88□□□□□ -0.51
RAB40B-202ENST00000538809 CST11Q9H112 138 aa11.88□□□□□ -0.51
RAB40B-202ENST00000538809 KCNK15Q9H427 330 aa11.88□□□□□ -0.51
RAB40B-202ENST00000538809 MBNL3Q9NUK0 354 aaKnown RBP11.88□□□□□ -0.51
RAB40B-202ENST00000538809 IGHV1-3A0A0C4DH29 117 aa11.87□□□□□ -0.51
RAB40B-202ENST00000538809 MPIG6BO95866 241 aa11.87□□□□□ -0.51
RAB40B-202ENST00000538809 HSMCR30P0CW71 290 aa11.87□□□□□ -0.51
RAB40B-202ENST00000538809 PF4V1P10720 104 aa11.87□□□□□ -0.51
RAB40B-202ENST00000538809 CHATP28329 748 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms