RNA–Protein interactions for RNA: ENST00000538363.1

TNFRSF1A-211, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-211ENST00000538363 PPIAL4CA0A0B4J2A2 164 aa8.84□□□□□ -0.99
TNFRSF1A-211ENST00000538363 PLA2G10O15496 165 aa8.84□□□□□ -0.99
TNFRSF1A-211ENST00000538363 PHF1O43189 567 aaPredicted RBP8.84□□□□□ -0.99
TNFRSF1A-211ENST00000538363 FOXH1O75593 365 aa8.84□□□□□ -0.99
TNFRSF1A-211ENST00000538363 PTTG1O95997 202 aa8.84□□□□□ -0.99
TNFRSF1A-211ENST00000538363 HBZP02008 142 aa8.84□□□□□ -0.99
TNFRSF1A-211ENST00000538363 PPIAL4GP0DN37 164 aa8.84□□□□□ -0.99
TNFRSF1A-211ENST00000538363 PAX1P15863 534 aa8.84□□□□□ -0.99
TNFRSF1A-211ENST00000538363 USF1P22415 310 aaPredicted RBP8.84□□□□□ -0.99
TNFRSF1A-211ENST00000538363 FCGR2CP31995 323 aa8.84□□□□□ -0.99
TNFRSF1A-211ENST00000538363 CEACAM6P40199 344 aa8.84□□□□□ -0.99
TNFRSF1A-211ENST00000538363 FXYD4P59646 89 aa8.84□□□□□ -0.99
TNFRSF1A-211ENST00000538363 ABCA11PQ4W5N1 156 aa8.84□□□□□ -0.99
TNFRSF1A-211ENST00000538363 C11orf88Q6PI97 169 aa8.84□□□□□ -0.99
TNFRSF1A-211ENST00000538363 IDO2Q6ZQW0 420 aa8.84□□□□□ -0.99
TNFRSF1A-211ENST00000538363 DNM1P46Q6ZS02 220 aa8.84□□□□□ -0.99
TNFRSF1A-211ENST00000538363 OR1L1Q8NH94 360 aa8.84□□□□□ -0.99
TNFRSF1A-211ENST00000538363 CLDND2Q8NHS1 167 aa8.84□□□□□ -0.99
TNFRSF1A-211ENST00000538363 IGFBPL1Q8WX77 278 aa8.84□□□□□ -0.99
TNFRSF1A-211ENST00000538363 CYYR1Q96J86 154 aa8.84□□□□□ -0.99
TNFRSF1A-211ENST00000538363 SLC6A7Q99884 636 aa8.84□□□□□ -0.99
TNFRSF1A-211ENST00000538363 NCOR1P1Q9H4R4 102 aa8.84□□□□□ -0.99
TNFRSF1A-211ENST00000538363 TAS2R3Q9NYW6 316 aa8.84□□□□□ -0.99
TNFRSF1A-211ENST00000538363 OPN4Q9UHM6 478 aa8.84□□□□□ -0.99
TNFRSF1A-211ENST00000538363 ITGB1BP2Q9UKP3 347 aa8.84□□□□□ -0.99
TNFRSF1A-211ENST00000538363 C14orf166Q9Y224 244 aaKnown RBP8.84□□□□□ -0.99
TNFRSF1A-211ENST00000538363 LINC00312Q9Y6C7 94 aa8.84□□□□□ -0.99
TNFRSF1A-211ENST00000538363 ABCA12Q86UK0 2595 aa8.83□□□□□ -1
TNFRSF1A-211ENST00000538363 USF3Q68DE3 2245 aa8.83□□□□□ -1
TNFRSF1A-211ENST00000538363 KBTBD11-OT1A0A1B0GTJ5 212 aa8.83□□□□□ -1
TNFRSF1A-211ENST00000538363 C12orf77C9JDV5 145 aa8.83□□□□□ -1
TNFRSF1A-211ENST00000538363 TOR1AO14656 332 aa8.83□□□□□ -1
TNFRSF1A-211ENST00000538363 TNFRSF13BO14836 293 aaPredicted RBP8.83□□□□□ -1
TNFRSF1A-211ENST00000538363 DHFRP00374 187 aa8.83□□□□□ -1
TNFRSF1A-211ENST00000538363 CD74P04233 296 aa8.83□□□□□ -1
TNFRSF1A-211ENST00000538363 LIPFP07098 398 aa8.83□□□□□ -1
TNFRSF1A-211ENST00000538363 ZNF728P0DKX0 622 aa8.83□□□□□ -1
TNFRSF1A-211ENST00000538363 NFYAP23511 347 aaPredicted RBP8.83□□□□□ -1
TNFRSF1A-211ENST00000538363 ECI1P42126 302 aa8.83□□□□□ -1
TNFRSF1A-211ENST00000538363 CCR6P51684 374 aa8.83□□□□□ -1
TNFRSF1A-211ENST00000538363 LCN2P80188 198 aa8.83□□□□□ -1
TNFRSF1A-211ENST00000538363 HMGN3Q15651 99 aa8.83□□□□□ -1
TNFRSF1A-211ENST00000538363 IGSF11Q5DX21 431 aa8.83□□□□□ -1
TNFRSF1A-211ENST00000538363 Q5PR19 223 aa8.83□□□□□ -1
TNFRSF1A-211ENST00000538363 VAX1Q5SQQ9 334 aa8.83□□□□□ -1
TNFRSF1A-211ENST00000538363 TMEM200BQ69YZ2 307 aa8.83□□□□□ -1
TNFRSF1A-211ENST00000538363 LPCAT3Q6P1A2 487 aa8.83□□□□□ -1
TNFRSF1A-211ENST00000538363 BTNL3Q6UXE8 466 aa8.83□□□□□ -1
TNFRSF1A-211ENST00000538363 Q6ZS49 121 aa8.83□□□□□ -1
TNFRSF1A-211ENST00000538363 ZNF554Q86TJ5 538 aa8.83□□□□□ -1
TNFRSF1A-211ENST00000538363 FGFRL1Q8N441 504 aa8.83□□□□□ -1
TNFRSF1A-211ENST00000538363 ARRDC1Q8N5I2 433 aa8.83□□□□□ -1
TNFRSF1A-211ENST00000538363 OR10V1Q8NGI7 309 aa8.83□□□□□ -1
TNFRSF1A-211ENST00000538363 ZFAND1Q8TCF1 268 aa8.83□□□□□ -1
TNFRSF1A-211ENST00000538363 SNAPC3Q92966 411 aa8.83□□□□□ -1
TNFRSF1A-211ENST00000538363 TOMM40LQ969M1 308 aa8.83□□□□□ -1
TNFRSF1A-211ENST00000538363 TMPRSS13Q9BYE2 586 aa8.83□□□□□ -1
TNFRSF1A-211ENST00000538363 ZFAND3Q9H8U3 227 aa8.83□□□□□ -1
TNFRSF1A-211ENST00000538363 C19orf12Q9NSK7 152 aa8.83□□□□□ -1
TNFRSF1A-211ENST00000538363 IDI2-AS1Q9NZ38 188 aa8.83□□□□□ -1
TNFRSF1A-211ENST00000538363 TBC1D24Q9ULP9 559 aa8.83□□□□□ -1
TNFRSF1A-211ENST00000538363 KCNS2Q9ULS6 477 aa8.83□□□□□ -1
TNFRSF1A-211ENST00000538363 NOTCH2Q04721 2471 aa8.82□□□□□ -1
TNFRSF1A-211ENST00000538363 TRAV6A0A075B6T7 132 aa8.82□□□□□ -1
TNFRSF1A-211ENST00000538363 IGHV4-30-2A0A087WSY4 118 aa8.82□□□□□ -1
TNFRSF1A-211ENST00000538363 IGKV1D-8A0A087WSZ0 117 aa8.82□□□□□ -1
TNFRSF1A-211ENST00000538363 IGHV3-43A0A0B4J1X8 118 aa8.82□□□□□ -1
TNFRSF1A-211ENST00000538363 ENSAO43768 121 aaKnown RBP8.82□□□□□ -1
TNFRSF1A-211ENST00000538363 IGHV2-5P01817 119 aa8.82□□□□□ -1
TNFRSF1A-211ENST00000538363 TCRBP04435 133 aa8.82□□□□□ -1
TNFRSF1A-211ENST00000538363 H2AFB2P0C5Z0 115 aa8.82□□□□□ -1
TNFRSF1A-211ENST00000538363 IGHV3-43DP0DP04 118 aa8.82□□□□□ -1
TNFRSF1A-211ENST00000538363 OMGP23515 440 aa8.82□□□□□ -1
TNFRSF1A-211ENST00000538363 FPR2P25090 351 aa8.82□□□□□ -1
TNFRSF1A-211ENST00000538363 SSTR5P35346 364 aa8.82□□□□□ -1
TNFRSF1A-211ENST00000538363 LUMP51884 338 aaPredicted RBP8.82□□□□□ -1
TNFRSF1A-211ENST00000538363 RBMS2Q15434 407 aaKnown RBP8.82□□□□□ -1
TNFRSF1A-211ENST00000538363 ZNF880Q6PDB4 577 aa8.82□□□□□ -1
TNFRSF1A-211ENST00000538363 CCBE1Q6UXH8 406 aaPredicted RBP8.82□□□□□ -1
TNFRSF1A-211ENST00000538363 NRARPQ7Z6K4 114 aa8.82□□□□□ -1
TNFRSF1A-211ENST00000538363 TMED4Q7Z7H5 227 aa8.82□□□□□ -1
TNFRSF1A-211ENST00000538363 OR52L2PQ8NGH6 319 aa8.82□□□□□ -1
TNFRSF1A-211ENST00000538363 OR4D10Q8NGI6 311 aa8.82□□□□□ -1
TNFRSF1A-211ENST00000538363 TERB2Q8NHR7 220 aa8.82□□□□□ -1
TNFRSF1A-211ENST00000538363 SECTM1Q8WVN6 248 aa8.82□□□□□ -1
TNFRSF1A-211ENST00000538363 EDARADDQ8WWZ3 215 aa8.82□□□□□ -1
TNFRSF1A-211ENST00000538363 CORO2AQ92828 525 aa8.82□□□□□ -1
TNFRSF1A-211ENST00000538363 MBD6Q96DN6 1003 aa8.82□□□□□ -1
TNFRSF1A-211ENST00000538363 SLC25A21Q9BQT8 299 aaPredicted RBP8.82□□□□□ -1
TNFRSF1A-211ENST00000538363 SLC5A7Q9GZV3 580 aa8.82□□□□□ -1
TNFRSF1A-211ENST00000538363 LPAR2Q9HBW0 351 aa8.82□□□□□ -1
TNFRSF1A-211ENST00000538363 MBNL3Q9NUK0 354 aaKnown RBP8.82□□□□□ -1
TNFRSF1A-211ENST00000538363 ANAPC10Q9UM13 185 aa8.82□□□□□ -1
TNFRSF1A-211ENST00000538363 NUBP2Q9Y5Y2 271 aa8.82□□□□□ -1
TNFRSF1A-211ENST00000538363 NBPF19A0A087WUL8 3843 aa8.81□□□□□ -1
TNFRSF1A-211ENST00000538363 YLPM1P49750 1951 aaKnown RBP8.81□□□□□ -1
TNFRSF1A-211ENST00000538363 CYSRT1A8MQ03 144 aa8.81□□□□□ -1
TNFRSF1A-211ENST00000538363 CCL3L1P16619 93 aa8.81□□□□□ -1
TNFRSF1A-211ENST00000538363 RAB25P57735 213 aa8.81□□□□□ -1
TNFRSF1A-211ENST00000538363 ARF6P62330 175 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms