RNA–Protein interactions for RNA: ENST00000538235.2

CHFR-216, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 687 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-216ENST00000538235 IDI2-AS1Q9NZ38 188 aa10.6□□□□□ -0.71
CHFR-216ENST00000538235 A0A075B6Q4 140 aa10.59□□□□□ -0.71
CHFR-216ENST00000538235 MEIOCA2RUB1 952 aa10.59□□□□□ -0.71
CHFR-216ENST00000538235 F2RL2O00254 374 aa10.59□□□□□ -0.71
CHFR-216ENST00000538235 IGHV4-59P01825 116 aa10.59□□□□□ -0.71
CHFR-216ENST00000538235 HBZP02008 142 aa10.59□□□□□ -0.71
CHFR-216ENST00000538235 HERPUD1Q15011 391 aa10.59□□□□□ -0.71
CHFR-216ENST00000538235 ZNF260Q3ZCT1 412 aa10.59□□□□□ -0.71
CHFR-216ENST00000538235 FOXB2Q5VYV0 432 aa10.59□□□□□ -0.71
CHFR-216ENST00000538235 Q6ZTK2 550 aa10.59□□□□□ -0.71
CHFR-216ENST00000538235 OR56B1Q8NGI3 324 aa10.59□□□□□ -0.71
CHFR-216ENST00000538235 PIFOQ8TCI5 191 aa10.59□□□□□ -0.71
CHFR-216ENST00000538235 NUDCD2Q8WVJ2 157 aa10.59□□□□□ -0.71
CHFR-216ENST00000538235 ARL11Q969Q4 196 aa10.59□□□□□ -0.71
CHFR-216ENST00000538235 ISOC1Q96CN7 298 aa10.59□□□□□ -0.71
CHFR-216ENST00000538235 MDFIQ99750 246 aa10.59□□□□□ -0.71
CHFR-216ENST00000538235 ATG5Q9H1Y0 275 aa10.59□□□□□ -0.71
CHFR-216ENST00000538235 GAL3ST2Q9H3Q3 398 aa10.59□□□□□ -0.71
CHFR-216ENST00000538235 TAF9BQ9HBM6 251 aa10.59□□□□□ -0.71
CHFR-216ENST00000538235 PLEKHJ1Q9NW61 149 aa10.59□□□□□ -0.71
CHFR-216ENST00000538235 ZNF230Q9UIE0 474 aaPredicted RBP10.59□□□□□ -0.71
CHFR-216ENST00000538235 SPATA2Q9UM82 520 aa10.59□□□□□ -0.71
CHFR-216ENST00000538235 TENM1Q9UKZ4 2725 aa10.59□□□□□ -0.71
CHFR-216ENST00000538235 TRBV6-6A0A0A6YYG2 114 aa10.58□□□□□ -0.72
CHFR-216ENST00000538235 FUOMA2VDF0 154 aa10.58□□□□□ -0.72
CHFR-216ENST00000538235 TMEM235A6NFC5 223 aa10.58□□□□□ -0.72
CHFR-216ENST00000538235 LY6LH3BQJ8 138 aa10.58□□□□□ -0.72
CHFR-216ENST00000538235 HOXA3O43365 443 aaPredicted RBP10.58□□□□□ -0.72
CHFR-216ENST00000538235 ORC5O43913 435 aa10.58□□□□□ -0.72
CHFR-216ENST00000538235 ARG1P05089 322 aa10.58□□□□□ -0.72
CHFR-216ENST00000538235 NFYBP25208 207 aa10.58□□□□□ -0.72
CHFR-216ENST00000538235 GNG10P50151 68 aa10.58□□□□□ -0.72
CHFR-216ENST00000538235 ZNF134P52741 427 aa10.58□□□□□ -0.72
CHFR-216ENST00000538235 MADCAM1Q13477 382 aa10.58□□□□□ -0.72
CHFR-216ENST00000538235 RBM39Q14498 530 aaKnown RBP10.58□□□□□ -0.72
CHFR-216ENST00000538235 SLC9A3R2Q15599 337 aa10.58□□□□□ -0.72
CHFR-216ENST00000538235 PLA1AQ53H76 456 aa10.58□□□□□ -0.72
CHFR-216ENST00000538235 Q6YL49 198 aa10.58□□□□□ -0.72
CHFR-216ENST00000538235 LDLRAD3Q86YD5 345 aa10.58□□□□□ -0.72
CHFR-216ENST00000538235 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.58□□□□□ -0.72
CHFR-216ENST00000538235 OR52L2PQ8NGH6 319 aa10.58□□□□□ -0.72
CHFR-216ENST00000538235 OR10V1Q8NGI7 309 aa10.58□□□□□ -0.72
CHFR-216ENST00000538235 DYNC2LI1Q8TCX1 351 aa10.58□□□□□ -0.72
CHFR-216ENST00000538235 RAB3CQ96E17 227 aa10.58□□□□□ -0.72
CHFR-216ENST00000538235 CLEC7AQ9BXN2 247 aa10.58□□□□□ -0.72
CHFR-216ENST00000538235 MIXL1Q9H2W2 232 aa10.58□□□□□ -0.72
CHFR-216ENST00000538235 Q9N2K0 584 aa10.58□□□□□ -0.72
CHFR-216ENST00000538235 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.58□□□□□ -0.72
CHFR-216ENST00000538235 GFOD1Q9NXC2 390 aa10.58□□□□□ -0.72
CHFR-216ENST00000538235 OR1A1Q9P1Q5 309 aa10.58□□□□□ -0.72
CHFR-216ENST00000538235 TRAPPC2LQ9UL33 140 aa10.58□□□□□ -0.72
CHFR-216ENST00000538235 PAIP2BQ9ULR5 123 aaKnown RBP10.58□□□□□ -0.72
CHFR-216ENST00000538235 PSG11Q9UQ72 335 aa10.58□□□□□ -0.72
CHFR-216ENST00000538235 ETV7Q9Y603 341 aa10.58□□□□□ -0.72
CHFR-216ENST00000538235 A0A1W2PPH5 198 aa10.57□□□□□ -0.72
CHFR-216ENST00000538235 FCGR3AP08637 254 aa10.57□□□□□ -0.72
CHFR-216ENST00000538235 SCTP09683 121 aa10.57□□□□□ -0.72
CHFR-216ENST00000538235 CD3GP09693 182 aa10.57□□□□□ -0.72
CHFR-216ENST00000538235 FPR2P25090 351 aa10.57□□□□□ -0.72
CHFR-216ENST00000538235 UBA52P62987 128 aaKnown RBP10.57□□□□□ -0.72
CHFR-216ENST00000538235 HLA-DRB3P79483 266 aa10.57□□□□□ -0.72
CHFR-216ENST00000538235 GUCA2AQ02747 115 aa10.57□□□□□ -0.72
CHFR-216ENST00000538235 HLA-DRB5Q30154 266 aa10.57□□□□□ -0.72
CHFR-216ENST00000538235 MIDNQ504T8 468 aa10.57□□□□□ -0.72
CHFR-216ENST00000538235 USP43Q70EL4 1123 aa10.57□□□□□ -0.72
CHFR-216ENST00000538235 ZNF554Q86TJ5 538 aa10.57□□□□□ -0.72
CHFR-216ENST00000538235 ABHD12Q8N2K0 398 aa10.57□□□□□ -0.72
CHFR-216ENST00000538235 PRR18Q8N4B5 295 aa10.57□□□□□ -0.72
CHFR-216ENST00000538235 CHIAQ9BZP6 476 aa10.57□□□□□ -0.72
CHFR-216ENST00000538235 HEXA-AS1Q9H8Q6 139 aa10.57□□□□□ -0.72
CHFR-216ENST00000538235 PALMDQ9NP74 551 aa10.57□□□□□ -0.72
CHFR-216ENST00000538235 TNFRSF19Q9NS68 423 aa10.57□□□□□ -0.72
CHFR-216ENST00000538235 ABRACLQ9P1F3 81 aa10.57□□□□□ -0.72
CHFR-216ENST00000538235 COL6A5A8TX70 2615 aa10.56□□□□□ -0.72
CHFR-216ENST00000538235 CCDC160A6NGH7 325 aa10.56□□□□□ -0.72
CHFR-216ENST00000538235 SDCBPO00560 298 aaPredicted RBP10.56□□□□□ -0.72
CHFR-216ENST00000538235 TCF21O43680 179 aa10.56□□□□□ -0.72
CHFR-216ENST00000538235 HPGDSO60760 199 aa10.56□□□□□ -0.72
CHFR-216ENST00000538235 CA11O75493 328 aa10.56□□□□□ -0.72
CHFR-216ENST00000538235 PPP1CCP36873 323 aaKnown RBP10.56□□□□□ -0.72
CHFR-216ENST00000538235 IER3P46695 156 aa10.56□□□□□ -0.72
CHFR-216ENST00000538235 TMBIM6P55061 237 aa10.56□□□□□ -0.72
CHFR-216ENST00000538235 SCAND1P57086 179 aa10.56□□□□□ -0.72
CHFR-216ENST00000538235 TEX29Q8N6K0 151 aa10.56□□□□□ -0.72
CHFR-216ENST00000538235 SAMD12Q8N8I0 201 aa10.56□□□□□ -0.72
CHFR-216ENST00000538235 BEND2Q8NDZ0 799 aa10.56□□□□□ -0.72
CHFR-216ENST00000538235 OR13D1Q8NGV5 346 aa10.56□□□□□ -0.72
CHFR-216ENST00000538235 SETD6Q8TBK2 473 aa10.56□□□□□ -0.72
CHFR-216ENST00000538235 ZNF596Q8TC21 504 aa10.56□□□□□ -0.72
CHFR-216ENST00000538235 RAB2BQ8WUD1 216 aa10.56□□□□□ -0.72
CHFR-216ENST00000538235 CMSS1Q9BQ75 279 aaKnown RBP10.56□□□□□ -0.72
CHFR-216ENST00000538235 ABCG5Q9H222 651 aa10.56□□□□□ -0.72
CHFR-216ENST00000538235 C12orf4Q9NQ89 552 aa10.56□□□□□ -0.72
CHFR-216ENST00000538235 ANK2Q01484 3957 aa10.55□□□□□ -0.72
CHFR-216ENST00000538235 J3QR06 171 aa10.55□□□□□ -0.72
CHFR-216ENST00000538235 CHST1O43916 411 aa10.55□□□□□ -0.72
CHFR-216ENST00000538235 ELK1P19419 428 aa10.55□□□□□ -0.72
CHFR-216ENST00000538235 RAB13P51153 203 aa10.55□□□□□ -0.72
CHFR-216ENST00000538235 RELBQ01201 579 aa10.55□□□□□ -0.72
CHFR-216ENST00000538235 CDNFQ49AH0 187 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms