RNA–Protein interactions for RNA: ENST00000537981.5

RTN3-208, Transcript of reticulon 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN3, Length 2,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-208ENST00000537981 CBLN1P23435 193 aa9.2□□□□□ -0.94
RTN3-208ENST00000537981 GFRA1P56159 465 aa9.2□□□□□ -0.94
RTN3-208ENST00000537981 UBE2NP61088 152 aaKnown RBP9.2□□□□□ -0.94
RTN3-208ENST00000537981 RAB30Q15771 203 aa9.2□□□□□ -0.94
RTN3-208ENST00000537981 ZNF440Q8IYI8 595 aa9.2□□□□□ -0.94
RTN3-208ENST00000537981 OR1E3Q8WZA6 343 aa9.2□□□□□ -0.94
RTN3-208ENST00000537981 SLAMF6Q96DU3 332 aa9.2□□□□□ -0.94
RTN3-208ENST00000537981 UHRF2Q96PU4 802 aa9.2□□□□□ -0.94
RTN3-208ENST00000537981 AGMATQ9BSE5 352 aa9.2□□□□□ -0.94
RTN3-208ENST00000537981 FAM206AQ9NX38 181 aa9.2□□□□□ -0.94
RTN3-208ENST00000537981 HCFC2Q9Y5Z7 792 aa9.2□□□□□ -0.94
RTN3-208ENST00000537981 SPACA6W5XKT8 324 aa9.2□□□□□ -0.94
RTN3-208ENST00000537981 ZNF407Q9C0G0 2248 aa9.19□□□□□ -0.94
RTN3-208ENST00000537981 IGKV1-9A0A0C4DH69 117 aa9.19□□□□□ -0.94
RTN3-208ENST00000537981 OR2T8A6NH00 312 aa9.19□□□□□ -0.94
RTN3-208ENST00000537981 SERINC4A6NH21 518 aa9.19□□□□□ -0.94
RTN3-208ENST00000537981 HSPB2A8KAH6 182 aa9.19□□□□□ -0.94
RTN3-208ENST00000537981 DIRC3C9JPN6 131 aa9.19□□□□□ -0.94
RTN3-208ENST00000537981 NPIPA2E9PIF3 369 aa9.19□□□□□ -0.94
RTN3-208ENST00000537981 TGFBR3LH3BV60 316 aa9.19□□□□□ -0.94
RTN3-208ENST00000537981 NBEAP1P0C6P0 100 aa9.19□□□□□ -0.94
RTN3-208ENST00000537981 ZNF17P17021 662 aa9.19□□□□□ -0.94
RTN3-208ENST00000537981 AADACP22760 399 aa9.19□□□□□ -0.94
RTN3-208ENST00000537981 HYAL1Q12794 435 aa9.19□□□□□ -0.94
RTN3-208ENST00000537981 HSPB2Q16082 182 aa9.19□□□□□ -0.94
RTN3-208ENST00000537981 IZUMO4Q1ZYL8 232 aa9.19□□□□□ -0.94
RTN3-208ENST00000537981 LINC01559Q495D7 138 aa9.19□□□□□ -0.94
RTN3-208ENST00000537981 COMMD2Q86X83 199 aa9.19□□□□□ -0.94
RTN3-208ENST00000537981 SFTPA1Q8IWL2 248 aa9.19□□□□□ -0.94
RTN3-208ENST00000537981 GPER1Q99527 375 aa9.19□□□□□ -0.94
RTN3-208ENST00000537981 OR10A2Q9H208 303 aa9.19□□□□□ -0.94
RTN3-208ENST00000537981 LYRM2Q9NU23 88 aaPredicted RBP9.19□□□□□ -0.94
RTN3-208ENST00000537981 SERGEFQ9UGK8 458 aa9.19□□□□□ -0.94
RTN3-208ENST00000537981 FOXI3A8MTJ6 420 aaPredicted RBP9.19□□□□□ -0.94
RTN3-208ENST00000537981 E9PLN8 166 aa9.19□□□□□ -0.94
RTN3-208ENST00000537981 KBTBD11O94819 623 aa9.19□□□□□ -0.94
RTN3-208ENST00000537981 HBE1P02100 147 aa9.19□□□□□ -0.94
RTN3-208ENST00000537981 GYPAP02724 150 aa9.19□□□□□ -0.94
RTN3-208ENST00000537981 TYMSP04818 313 aa9.19□□□□□ -0.94
RTN3-208ENST00000537981 TSPOP30536 169 aa9.19□□□□□ -0.94
RTN3-208ENST00000537981 LHX2P50458 406 aa9.19□□□□□ -0.94
RTN3-208ENST00000537981 ZNF133P52736 654 aaPredicted RBP9.19□□□□□ -0.94
RTN3-208ENST00000537981 RANP62826 216 aaKnown RBP9.19□□□□□ -0.94
RTN3-208ENST00000537981 GPM6BQ13491 265 aa9.19□□□□□ -0.94
RTN3-208ENST00000537981 ABCA11PQ4W5N1 156 aa9.19□□□□□ -0.94
RTN3-208ENST00000537981 ZNF596Q8TC21 504 aa9.19□□□□□ -0.94
RTN3-208ENST00000537981 STARD4Q96DR4 205 aa9.19□□□□□ -0.94
RTN3-208ENST00000537981 WDYHV1Q96HA8 205 aa9.19□□□□□ -0.94
RTN3-208ENST00000537981 HSPB7Q9UBY9 170 aa9.19□□□□□ -0.94
RTN3-208ENST00000537981 CHD9Q3L8U1 2897 aa9.18□□□□□ -0.94
RTN3-208ENST00000537981 NCOA6Q14686 2063 aaPredicted RBP9.18□□□□□ -0.94
RTN3-208ENST00000537981 ZNF737O75373 536 aa9.18□□□□□ -0.94
RTN3-208ENST00000537981 IGKV1D-33P01593 117 aa9.18□□□□□ -0.94
RTN3-208ENST00000537981 IGKV1-33P01594 117 aa9.18□□□□□ -0.94
RTN3-208ENST00000537981 SERPINA7P05543 415 aa9.18□□□□□ -0.94
RTN3-208ENST00000537981 C1QTNF9P0C862 333 aa9.18□□□□□ -0.94
RTN3-208ENST00000537981 ZNF728P0DKX0 622 aa9.18□□□□□ -0.94
RTN3-208ENST00000537981 YPEL5P62699 121 aa9.18□□□□□ -0.94
RTN3-208ENST00000537981 PSG4Q00888 419 aa9.18□□□□□ -0.94
RTN3-208ENST00000537981 LCN12Q6JVE5 192 aa9.18□□□□□ -0.94
RTN3-208ENST00000537981 C1orf174Q8IYL3 243 aa9.18□□□□□ -0.94
RTN3-208ENST00000537981 ZNF114Q8NC26 417 aa9.18□□□□□ -0.94
RTN3-208ENST00000537981 OR5AU1Q8NGC0 362 aa9.18□□□□□ -0.94
RTN3-208ENST00000537981 LIN37Q96GY3 246 aaPredicted RBP9.18□□□□□ -0.94
RTN3-208ENST00000537981 TMEM56Q96MV1 263 aa9.18□□□□□ -0.94
RTN3-208ENST00000537981 SLC46A1Q96NT5 459 aa9.18□□□□□ -0.94
RTN3-208ENST00000537981 ZFYVE21Q9BQ24 234 aa9.18□□□□□ -0.94
RTN3-208ENST00000537981 PBOV1Q9GZY1 135 aa9.18□□□□□ -0.94
RTN3-208ENST00000537981 NKX2-4Q9H2Z4 354 aa9.18□□□□□ -0.94
RTN3-208ENST00000537981 PLEKHF2Q9H8W4 249 aa9.18□□□□□ -0.94
RTN3-208ENST00000537981 UQCR10Q9UDW1 63 aa9.18□□□□□ -0.94
RTN3-208ENST00000537981 INSL6Q9Y581 213 aa9.18□□□□□ -0.94
RTN3-208ENST00000537981 TMEM56-RWDD3S4R434 201 aa9.18□□□□□ -0.94
RTN3-208ENST00000537981 ARHGEF17Q96PE2 2063 aaPredicted RBP9.18□□□□□ -0.94
RTN3-208ENST00000537981 G3V3Y1 287 aa9.17□□□□□ -0.94
RTN3-208ENST00000537981 FAHP16930 419 aa9.17□□□□□ -0.94
RTN3-208ENST00000537981 NPPCP23582 126 aa9.17□□□□□ -0.94
RTN3-208ENST00000537981 DTYMKP23919 212 aa9.17□□□□□ -0.94
RTN3-208ENST00000537981 MTCP1P56278 107 aa9.17□□□□□ -0.94
RTN3-208ENST00000537981 TPPP2P59282 170 aa9.17□□□□□ -0.94
RTN3-208ENST00000537981 MORN2Q502X0 79 aa9.17□□□□□ -0.94
RTN3-208ENST00000537981 OR5D14Q8NGL3 314 aa9.17□□□□□ -0.94
RTN3-208ENST00000537981 ZNF519Q8TB69 540 aa9.17□□□□□ -0.94
RTN3-208ENST00000537981 RLN3Q8WXF3 142 aa9.17□□□□□ -0.94
RTN3-208ENST00000537981 FAM3CQ92520 227 aa9.17□□□□□ -0.94
RTN3-208ENST00000537981 ST6GALNAC6Q969X2 333 aa9.17□□□□□ -0.94
RTN3-208ENST00000537981 CTHRC1Q96CG8 243 aa9.17□□□□□ -0.94
RTN3-208ENST00000537981 DERL1Q9BUN8 251 aa9.17□□□□□ -0.94
RTN3-208ENST00000537981 FREM2Q5SZK8 3169 aa9.17□□□□□ -0.94
RTN3-208ENST00000537981 ZNF850A8MQ14 1090 aa9.17□□□□□ -0.94
RTN3-208ENST00000537981 C22orf46C9J442 243 aa9.17□□□□□ -0.94
RTN3-208ENST00000537981 CHST1O43916 411 aa9.17□□□□□ -0.94
RTN3-208ENST00000537981 EML2O95834 649 aa9.17□□□□□ -0.94
RTN3-208ENST00000537981 PAX9P55771 341 aa9.17□□□□□ -0.94
RTN3-208ENST00000537981 ARL16Q0P5N6 197 aa9.17□□□□□ -0.94
RTN3-208ENST00000537981 PRDX4Q13162 271 aa9.17□□□□□ -0.94
RTN3-208ENST00000537981 MSMO1Q15800 293 aa9.17□□□□□ -0.94
RTN3-208ENST00000537981 ZNF141Q15928 474 aa9.17□□□□□ -0.94
RTN3-208ENST00000537981 PRAMEF20Q5VT98 475 aa9.17□□□□□ -0.94
RTN3-208ENST00000537981 HAPLN4Q86UW8 402 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms