RNA–Protein interactions for RNA: ENST00000537435.2

USP44-203, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-203ENST00000537435 RBMS3Q6XE24 437 aaKnown RBP12.18□□□□□ -0.46
USP44-203ENST00000537435 OR10V1Q8NGI7 309 aa12.18□□□□□ -0.46
USP44-203ENST00000537435 OR1A1Q9P1Q5 309 aa12.18□□□□□ -0.46
USP44-203ENST00000537435 TRAV39A0A0B4J263 110 aa12.17□□□□□ -0.46
USP44-203ENST00000537435 SRP19P09132 144 aaKnown RBP12.17□□□□□ -0.46
USP44-203ENST00000537435 TAS2R30P59541 319 aa12.17□□□□□ -0.46
USP44-203ENST00000537435 OR8G1Q15617 311 aa12.17□□□□□ -0.46
USP44-203ENST00000537435 STX12Q86Y82 276 aa12.17□□□□□ -0.46
USP44-203ENST00000537435 RNASE11Q8TAA1 199 aaKnown RBP12.17□□□□□ -0.46
USP44-203ENST00000537435 PKIBQ9C010 78 aa12.17□□□□□ -0.46
USP44-203ENST00000537435 OR51I2Q9H344 312 aa12.17□□□□□ -0.46
USP44-203ENST00000537435 UNKLQ9H9P5 680 aaKnown RBP12.17□□□□□ -0.46
USP44-203ENST00000537435 R4GN57 208 aa12.17□□□□□ -0.46
USP44-203ENST00000537435 CELSR3Q9NYQ7 3312 aa12.17□□□□□ -0.46
USP44-203ENST00000537435 ZNF407Q9C0G0 2248 aa12.17□□□□□ -0.46
USP44-203ENST00000537435 A0A1B0GU03 582 aa12.17□□□□□ -0.46
USP44-203ENST00000537435 DEGS1O15121 323 aa12.17□□□□□ -0.46
USP44-203ENST00000537435 SCAF4O95104 1147 aaKnown RBP12.17□□□□□ -0.46
USP44-203ENST00000537435 OR2C1O95371 312 aa12.17□□□□□ -0.46
USP44-203ENST00000537435 IL18BPO95998 194 aa12.17□□□□□ -0.46
USP44-203ENST00000537435 OR2B8PP59922 312 aa12.17□□□□□ -0.46
USP44-203ENST00000537435 RPL23AP62750 156 aaKnown RBP12.17□□□□□ -0.46
USP44-203ENST00000537435 CTAG1AP78358 180 aa12.17□□□□□ -0.46
USP44-203ENST00000537435 TMEM267Q0VDI3 215 aaPredicted RBP12.17□□□□□ -0.46
USP44-203ENST00000537435 FABP9Q0Z7S8 132 aa12.17□□□□□ -0.46
USP44-203ENST00000537435 ICAM4Q14773 271 aa12.17□□□□□ -0.46
USP44-203ENST00000537435 ZNF295-AS1Q8N0V1 137 aa12.17□□□□□ -0.46
USP44-203ENST00000537435 MALSU1Q96EH3 234 aa12.17□□□□□ -0.46
USP44-203ENST00000537435 GPR87Q9BY21 358 aa12.17□□□□□ -0.46
USP44-203ENST00000537435 ZDBF2Q9HCK1 2354 aa12.16□□□□□ -0.46
USP44-203ENST00000537435 KIAA1324LA8MWY0 1029 aaPredicted RBP12.16□□□□□ -0.46
USP44-203ENST00000537435 H3BQ15 152 aa12.16□□□□□ -0.46
USP44-203ENST00000537435 TXNL1O43396 289 aa12.16□□□□□ -0.46
USP44-203ENST00000537435 FBP1P09467 338 aa12.16□□□□□ -0.46
USP44-203ENST00000537435 MEOX1P50221 254 aa12.16□□□□□ -0.46
USP44-203ENST00000537435 TLE4Q04727 773 aa12.16□□□□□ -0.46
USP44-203ENST00000537435 Q6P435 159 aa12.16□□□□□ -0.46
USP44-203ENST00000537435 Q6ZRM9 215 aa12.16□□□□□ -0.46
USP44-203ENST00000537435 MDP1Q86V88 176 aa12.16□□□□□ -0.46
USP44-203ENST00000537435 PRR18Q8N4B5 295 aa12.16□□□□□ -0.46
USP44-203ENST00000537435 OR1K1Q8NGR3 316 aa12.16□□□□□ -0.46
USP44-203ENST00000537435 DNAJC13O75165 2243 aa12.16□□□□□ -0.46
USP44-203ENST00000537435 KMT2EQ8IZD2 1858 aa12.16□□□□□ -0.46
USP44-203ENST00000537435 MUC3AQ02505 3323 aa12.16□□□□□ -0.46
USP44-203ENST00000537435 J3QT63 122 aa12.16□□□□□ -0.46
USP44-203ENST00000537435 DFFBO76075 338 aa12.16□□□□□ -0.46
USP44-203ENST00000537435 MT-CO3P00414 261 aa12.16□□□□□ -0.46
USP44-203ENST00000537435 IGKV1-39P01597 117 aa12.16□□□□□ -0.46
USP44-203ENST00000537435 IGKV1D-39P04432 117 aa12.16□□□□□ -0.46
USP44-203ENST00000537435 S100A8P05109 93 aa12.16□□□□□ -0.46
USP44-203ENST00000537435 SLC25A6P12236 298 aa12.16□□□□□ -0.46
USP44-203ENST00000537435 SLC25A24Q6NUK1 477 aa12.16□□□□□ -0.46
USP44-203ENST00000537435 P4HA3Q7Z4N8 544 aa12.16□□□□□ -0.46
USP44-203ENST00000537435 VASH2Q86V25 355 aa12.16□□□□□ -0.46
USP44-203ENST00000537435 THNSL2Q86YJ6 484 aa12.16□□□□□ -0.46
USP44-203ENST00000537435 NANPQ8TBE9 248 aa12.16□□□□□ -0.46
USP44-203ENST00000537435 RAB39BQ96DA2 213 aa12.16□□□□□ -0.46
USP44-203ENST00000537435 ARRDC1-AS1Q9H2J1 176 aa12.16□□□□□ -0.46
USP44-203ENST00000537435 METTL1Q9UBP6 276 aaKnown RBP12.16□□□□□ -0.46
USP44-203ENST00000537435 COL6A3P12111 3177 aa12.16□□□□□ -0.46
USP44-203ENST00000537435 WDFY4Q6ZS81 3184 aa12.15□□□□□ -0.46
USP44-203ENST00000537435 C21orf140B9A014 251 aa12.15□□□□□ -0.46
USP44-203ENST00000537435 H0YL77 283 aa12.15□□□□□ -0.46
USP44-203ENST00000537435 CNOT4O95628 575 aaKnown RBP12.15□□□□□ -0.46
USP44-203ENST00000537435 IGLV2-14P01704 120 aa12.15□□□□□ -0.46
USP44-203ENST00000537435 SP1P08047 785 aa12.15□□□□□ -0.46
USP44-203ENST00000537435 MPLP40238 635 aa12.15□□□□□ -0.46
USP44-203ENST00000537435 ZNF506Q5JVG8 444 aa12.15□□□□□ -0.46
USP44-203ENST00000537435 SLC16A13Q7RTY0 426 aa12.15□□□□□ -0.46
USP44-203ENST00000537435 CYB561D1Q8N8Q1 229 aa12.15□□□□□ -0.46
USP44-203ENST00000537435 YPEL4Q96NS1 127 aa12.15□□□□□ -0.46
USP44-203ENST00000537435 GUCD1Q96NT3 240 aa12.15□□□□□ -0.46
USP44-203ENST00000537435 RAB40CQ96S21 281 aa12.15□□□□□ -0.46
USP44-203ENST00000537435 ZNF727A8MUV8 499 aa12.15□□□□□ -0.46
USP44-203ENST00000537435 SIRPB1O00241 398 aa12.15□□□□□ -0.46
USP44-203ENST00000537435 IFNA5P01569 189 aa12.15□□□□□ -0.46
USP44-203ENST00000537435 IGHV2-5P01817 119 aa12.15□□□□□ -0.46
USP44-203ENST00000537435 HBE1P02100 147 aa12.15□□□□□ -0.46
USP44-203ENST00000537435 HSPB1P04792 205 aaKnown RBP12.15□□□□□ -0.46
USP44-203ENST00000537435 ZNF883P0CG24 379 aa12.15□□□□□ -0.46
USP44-203ENST00000537435 MAS1LP35410 378 aa12.15□□□□□ -0.46
USP44-203ENST00000537435 S100A12P80511 92 aa12.15□□□□□ -0.46
USP44-203ENST00000537435 TMEM164Q5U3C3 297 aa12.15□□□□□ -0.46
USP44-203ENST00000537435 CLDND2Q8NHS1 167 aa12.15□□□□□ -0.46
USP44-203ENST00000537435 UBALD1Q8TB05 177 aa12.15□□□□□ -0.46
USP44-203ENST00000537435 BCL2L2Q92843 193 aaPredicted RBP12.15□□□□□ -0.46
USP44-203ENST00000537435 RBMXL1Q96E39 390 aaKnown RBP12.15□□□□□ -0.46
USP44-203ENST00000537435 CACNG5Q9UF02 275 aa12.15□□□□□ -0.46
USP44-203ENST00000537435 PPP1R3CQ9UQK1 317 aa12.15□□□□□ -0.46
USP44-203ENST00000537435 WSB1Q9Y6I7 421 aa12.15□□□□□ -0.46
USP44-203ENST00000537435 DOCK7Q96N67 2140 aa12.14□□□□□ -0.47
USP44-203ENST00000537435 PIGBOS1A0A0B4J2F0 54 aa12.14□□□□□ -0.47
USP44-203ENST00000537435 A0A1W2PR80 420 aa12.14□□□□□ -0.47
USP44-203ENST00000537435 NPIPB11E5RHQ5 1161 aa12.14□□□□□ -0.47
USP44-203ENST00000537435 S100A9P06702 114 aaKnown RBP12.14□□□□□ -0.47
USP44-203ENST00000537435 SMIM6P0DI80 62 aa12.14□□□□□ -0.47
USP44-203ENST00000537435 IAPPP10997 89 aa12.14□□□□□ -0.47
USP44-203ENST00000537435 NQO2P16083 231 aa12.14□□□□□ -0.47
USP44-203ENST00000537435 TAGLN2P37802 199 aaKnown RBP12.14□□□□□ -0.47
USP44-203ENST00000537435 RAB2AP61019 212 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms