RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 PMCHL1Q16048 86 aa4.72□□□□□ -1.65
PTPRD-213ENST00000537002 HDHD3Q9BSH5 251 aaPredicted RBP4.72□□□□□ -1.65
PTPRD-213ENST00000537002 LRFN3Q9BTN0 628 aa4.72□□□□□ -1.65
PTPRD-213ENST00000537002 TPSD1Q9BZJ3 242 aa4.72□□□□□ -1.65
PTPRD-213ENST00000537002 CBR3O75828 277 aa4.72□□□□□ -1.65
PTPRD-213ENST00000537002 UCP3P55916 312 aa4.72□□□□□ -1.65
PTPRD-213ENST00000537002 MAJINQ3KP22 176 aa4.72□□□□□ -1.65
PTPRD-213ENST00000537002 GFI1BQ5VTD9 330 aa4.72□□□□□ -1.65
PTPRD-213ENST00000537002 ERASQ7Z444 233 aa4.72□□□□□ -1.65
PTPRD-213ENST00000537002 ST6GALNAC3Q8NDV1 305 aa4.72□□□□□ -1.65
PTPRD-213ENST00000537002 OR4C3Q8NH37 302 aa4.72□□□□□ -1.65
PTPRD-213ENST00000537002 ANXA10Q9UJ72 324 aa4.72□□□□□ -1.65
PTPRD-213ENST00000537002 IFITM10A6NMD0 228 aa4.72□□□□□ -1.65
PTPRD-213ENST00000537002 ZNF891A8MT65 544 aaPredicted RBP4.72□□□□□ -1.65
PTPRD-213ENST00000537002 H0Y8X5 98 aa4.72□□□□□ -1.65
PTPRD-213ENST00000537002 EREGO14944 169 aa4.72□□□□□ -1.65
PTPRD-213ENST00000537002 MRPL33O75394 65 aaKnown RBP4.72□□□□□ -1.65
PTPRD-213ENST00000537002 TNFSF15O95150 251 aa4.72□□□□□ -1.65
PTPRD-213ENST00000537002 CT62P0C5K7 136 aa4.72□□□□□ -1.65
PTPRD-213ENST00000537002 EPHA8P29322 1005 aaPredicted RBP4.72□□□□□ -1.65
PTPRD-213ENST00000537002 CAMPP49913 170 aa4.72□□□□□ -1.65
PTPRD-213ENST00000537002 C17orf67Q0P5P2 114 aa4.72□□□□□ -1.65
PTPRD-213ENST00000537002 C1QL3Q5VWW1 255 aa4.72□□□□□ -1.65
PTPRD-213ENST00000537002 ACSM6Q6P461 480 aa4.72□□□□□ -1.65
PTPRD-213ENST00000537002 WDR74Q6RFH5 385 aaPredicted RBP4.72□□□□□ -1.65
PTPRD-213ENST00000537002 OR2J1Q9GZK6 312 aa4.72□□□□□ -1.65
PTPRD-213ENST00000537002 LPAR2Q9HBW0 351 aa4.72□□□□□ -1.65
PTPRD-213ENST00000537002 FBLL1A6NHQ2 334 aaKnown RBP4.71□□□□□ -1.65
PTPRD-213ENST00000537002 OTX1P32242 354 aaPredicted RBP4.71□□□□□ -1.65
PTPRD-213ENST00000537002 EDDM3AQ14507 147 aa4.71□□□□□ -1.65
PTPRD-213ENST00000537002 P2RY6Q15077 328 aa4.71□□□□□ -1.65
PTPRD-213ENST00000537002 SHBQ15464 509 aa4.71□□□□□ -1.65
PTPRD-213ENST00000537002 ATOH7Q8N100 152 aa4.71□□□□□ -1.65
PTPRD-213ENST00000537002 CCL4L1Q8NHW4 92 aa4.71□□□□□ -1.65
PTPRD-213ENST00000537002 PATE1Q8WXA2 126 aa4.71□□□□□ -1.65
PTPRD-213ENST00000537002 ZBP1Q9H171 429 aa4.71□□□□□ -1.65
PTPRD-213ENST00000537002 DECR2Q9NUI1 292 aa4.71□□□□□ -1.65
PTPRD-213ENST00000537002 B4GALT7Q9UBV7 327 aa4.71□□□□□ -1.65
PTPRD-213ENST00000537002 IGHV3-15A0A0B4J1V0 119 aa4.71□□□□□ -1.66
PTPRD-213ENST00000537002 ZNF217O75362 1048 aa4.71□□□□□ -1.66
PTPRD-213ENST00000537002 LYPD3O95274 346 aa4.71□□□□□ -1.66
PTPRD-213ENST00000537002 CXCL12P48061 93 aa4.71□□□□□ -1.66
PTPRD-213ENST00000537002 PSG6Q00889 435 aa4.71□□□□□ -1.66
PTPRD-213ENST00000537002 GABRA6Q16445 453 aa4.71□□□□□ -1.66
PTPRD-213ENST00000537002 OR4X1Q8NH49 305 aa4.71□□□□□ -1.66
PTPRD-213ENST00000537002 OBP2AQ9NY56 170 aa4.71□□□□□ -1.66
PTPRD-213ENST00000537002 YTHDF2Q9Y5A9 579 aaKnown RBP4.71□□□□□ -1.66
PTPRD-213ENST00000537002 COMPP49747 757 aaPredicted RBP4.71□□□□□ -1.66
PTPRD-213ENST00000537002 PLGLAQ15195 96 aa4.71□□□□□ -1.66
PTPRD-213ENST00000537002 TMEM251Q8N6I4 163 aa4.71□□□□□ -1.66
PTPRD-213ENST00000537002 ZNF665Q9H7R5 613 aa4.71□□□□□ -1.66
PTPRD-213ENST00000537002 THY1P04216 161 aa4.71□□□□□ -1.66
PTPRD-213ENST00000537002 CSN3P07498 182 aa4.71□□□□□ -1.66
PTPRD-213ENST00000537002 OR5AL1P0C617 328 aa4.71□□□□□ -1.66
PTPRD-213ENST00000537002 MPLP40238 635 aa4.71□□□□□ -1.66
PTPRD-213ENST00000537002 TAS2R45P59539 299 aa4.71□□□□□ -1.66
PTPRD-213ENST00000537002 ERVFRD-1P60508 538 aa4.71□□□□□ -1.66
PTPRD-213ENST00000537002 HIST3H3Q16695 136 aa4.71□□□□□ -1.66
PTPRD-213ENST00000537002 DHRS13Q6UX07 377 aa4.71□□□□□ -1.66
PTPRD-213ENST00000537002 PLXDC1Q8IUK5 500 aa4.71□□□□□ -1.66
PTPRD-213ENST00000537002 GBGT1Q8N5D6 347 aa4.71□□□□□ -1.66
PTPRD-213ENST00000537002 OR1K1Q8NGR3 316 aa4.71□□□□□ -1.66
PTPRD-213ENST00000537002 OR11L1Q8NGX0 322 aa4.71□□□□□ -1.66
PTPRD-213ENST00000537002 BAHD1Q8TBE0 780 aaPredicted RBP4.71□□□□□ -1.66
PTPRD-213ENST00000537002 ZNRF4Q8WWF5 429 aa4.71□□□□□ -1.66
PTPRD-213ENST00000537002 TNFRSF14Q92956 283 aa4.71□□□□□ -1.66
PTPRD-213ENST00000537002 WDR61Q9GZS3 305 aaKnown RBP4.71□□□□□ -1.66
PTPRD-213ENST00000537002 TMEM191AQ9H0A3 160 aa4.71□□□□□ -1.66
PTPRD-213ENST00000537002 MRPS16Q9Y3D3 137 aaKnown RBP4.71□□□□□ -1.66
PTPRD-213ENST00000537002 GAGE10A6NGK3 116 aa4.71□□□□□ -1.66
PTPRD-213ENST00000537002 TMEM14DPA8MWL7 114 aa4.71□□□□□ -1.66
PTPRD-213ENST00000537002 UBE2V1Q13404 147 aa4.71□□□□□ -1.66
PTPRD-213ENST00000537002 FA2HQ7L5A8 372 aa4.71□□□□□ -1.66
PTPRD-213ENST00000537002 PRSS41Q7RTY9 318 aa4.71□□□□□ -1.66
PTPRD-213ENST00000537002 GAPTQ8N292 157 aa4.71□□□□□ -1.66
PTPRD-213ENST00000537002 MVB12AQ96EY5 273 aa4.71□□□□□ -1.66
PTPRD-213ENST00000537002 AMELYQ99218 206 aa4.71□□□□□ -1.66
PTPRD-213ENST00000537002 ALKBH7Q9BT30 221 aaPredicted RBP4.71□□□□□ -1.66
PTPRD-213ENST00000537002 SDF2L1Q9HCN8 221 aa4.71□□□□□ -1.66
PTPRD-213ENST00000537002 PLA2G3Q9NZ20 509 aa4.71□□□□□ -1.66
PTPRD-213ENST00000537002 NKX6-3A6NJ46 265 aa4.71□□□□□ -1.66
PTPRD-213ENST00000537002 LMX1BO60663 402 aa4.71□□□□□ -1.66
PTPRD-213ENST00000537002 GCH1P30793 250 aa4.71□□□□□ -1.66
PTPRD-213ENST00000537002 MDH2P40926 338 aaKnown RBP4.71□□□□□ -1.66
PTPRD-213ENST00000537002 TMEM50BP56557 158 aa4.71□□□□□ -1.66
PTPRD-213ENST00000537002 CBLN3Q6UW01 205 aa4.71□□□□□ -1.66
PTPRD-213ENST00000537002 DGAT2L6Q6ZPD8 337 aa4.71□□□□□ -1.66
PTPRD-213ENST00000537002 TMEM106BQ9NUM4 274 aa4.71□□□□□ -1.66
PTPRD-213ENST00000537002 IL6RP08887 468 aaPredicted RBP4.7□□□□□ -1.66
PTPRD-213ENST00000537002 PRICKLE4Q2TBC4 344 aa4.7□□□□□ -1.66
PTPRD-213ENST00000537002 ZNF658BQ4V348 819 aaPredicted RBP4.7□□□□□ -1.66
PTPRD-213ENST00000537002 DPF1Q92782 380 aa4.7□□□□□ -1.66
PTPRD-213ENST00000537002 TRAV30A0A087WSZ9 112 aa4.7□□□□□ -1.66
PTPRD-213ENST00000537002 RHBDL1O75783 438 aa4.7□□□□□ -1.66
PTPRD-213ENST00000537002 FOXK1P85037 733 aa4.7□□□□□ -1.66
PTPRD-213ENST00000537002 TMEM215Q68D42 235 aa4.7□□□□□ -1.66
PTPRD-213ENST00000537002 OR2V1Q8NHB1 315 aa4.7□□□□□ -1.66
PTPRD-213ENST00000537002 MBD3L1Q8WWY6 194 aa4.7□□□□□ -1.66
PTPRD-213ENST00000537002 ERRFI1Q9UJM3 462 aaPredicted RBP4.7□□□□□ -1.66
PTPRD-213ENST00000537002 TIMM9Q9Y5J7 89 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms