RNA–Protein interactions for RNA: ENST00000536483.1

PRKDC-207, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 834 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-207ENST00000536483 YIPF6Q96EC8 236 aa9.97□□□□□ -0.81
PRKDC-207ENST00000536483 Q96M66 194 aa9.97□□□□□ -0.81
PRKDC-207ENST00000536483 MMP28Q9H239 520 aa9.97□□□□□ -0.81
PRKDC-207ENST00000536483 ZNF702PQ9H963 129 aa9.97□□□□□ -0.81
PRKDC-207ENST00000536483 ABCB10Q9NRK6 738 aa9.97□□□□□ -0.81
PRKDC-207ENST00000536483 SERTAD4Q9NUC0 356 aa9.97□□□□□ -0.81
PRKDC-207ENST00000536483 IDI2-AS1Q9NZ38 188 aa9.97□□□□□ -0.81
PRKDC-207ENST00000536483 TMEM30CPA0ZSE6 113 aa9.96□□□□□ -0.82
PRKDC-207ENST00000536483 FAM90A9PA6NNJ1 464 aa9.96□□□□□ -0.82
PRKDC-207ENST00000536483 J3QR06 171 aa9.96□□□□□ -0.82
PRKDC-207ENST00000536483 CPEP16870 476 aa9.96□□□□□ -0.82
PRKDC-207ENST00000536483 SRMP19623 302 aa9.96□□□□□ -0.82
PRKDC-207ENST00000536483 PSMA1P25786 263 aaKnown RBP9.96□□□□□ -0.82
PRKDC-207ENST00000536483 BRS3P32247 399 aa9.96□□□□□ -0.82
PRKDC-207ENST00000536483 LOXL3P58215 753 aa9.96□□□□□ -0.82
PRKDC-207ENST00000536483 MLLT11Q13015 90 aaPredicted RBP9.96□□□□□ -0.82
PRKDC-207ENST00000536483 RBM39Q14498 530 aaKnown RBP9.96□□□□□ -0.82
PRKDC-207ENST00000536483 TMEM30BQ3MIR4 351 aa9.96□□□□□ -0.82
PRKDC-207ENST00000536483 TIMM50Q3ZCQ8 353 aa9.96□□□□□ -0.82
PRKDC-207ENST00000536483 UTF1Q5T230 341 aa9.96□□□□□ -0.82
PRKDC-207ENST00000536483 TPTE2P1Q5T6R2 138 aa9.96□□□□□ -0.82
PRKDC-207ENST00000536483 TMEM91Q6ZNR0 172 aa9.96□□□□□ -0.82
PRKDC-207ENST00000536483 ZNF367Q7RTV3 350 aa9.96□□□□□ -0.82
PRKDC-207ENST00000536483 ZNF554Q86TJ5 538 aa9.96□□□□□ -0.82
PRKDC-207ENST00000536483 THNSL2Q86YJ6 484 aa9.96□□□□□ -0.82
PRKDC-207ENST00000536483 TMEM104Q8NE00 496 aa9.96□□□□□ -0.82
PRKDC-207ENST00000536483 FUNDC2Q9BWH2 189 aa9.96□□□□□ -0.82
PRKDC-207ENST00000536483 NECAP2Q9NVZ3 263 aa9.96□□□□□ -0.82
PRKDC-207ENST00000536483 AURKAIP1Q9NWT8 199 aaPredicted RBP9.96□□□□□ -0.82
PRKDC-207ENST00000536483 HILPDAQ9Y5L2 63 aa9.96□□□□□ -0.82
PRKDC-207ENST00000536483 MCRIP1C9JLW8 97 aa9.95□□□□□ -0.82
PRKDC-207ENST00000536483 F2RL2O00254 374 aa9.95□□□□□ -0.82
PRKDC-207ENST00000536483 HSPB6O14558 160 aa9.95□□□□□ -0.82
PRKDC-207ENST00000536483 TOR1AO14656 332 aa9.95□□□□□ -0.82
PRKDC-207ENST00000536483 MGMTP16455 207 aa9.95□□□□□ -0.82
PRKDC-207ENST00000536483 FUT3P21217 361 aa9.95□□□□□ -0.82
PRKDC-207ENST00000536483 GLP1RP43220 463 aa9.95□□□□□ -0.82
PRKDC-207ENST00000536483 SERPINB10P48595 397 aa9.95□□□□□ -0.82
PRKDC-207ENST00000536483 DCTN2Q13561 401 aaKnown RBP9.95□□□□□ -0.82
PRKDC-207ENST00000536483 INSL4Q14641 139 aa9.95□□□□□ -0.82
PRKDC-207ENST00000536483 MED22Q15528 200 aa9.95□□□□□ -0.82
PRKDC-207ENST00000536483 GLT8D1Q68CQ7 371 aa9.95□□□□□ -0.82
PRKDC-207ENST00000536483 AWAT2Q6E213 333 aa9.95□□□□□ -0.82
PRKDC-207ENST00000536483 SIGIRRQ6IA17 410 aa9.95□□□□□ -0.82
PRKDC-207ENST00000536483 CCDC144NLQ6NUI1 221 aa9.95□□□□□ -0.82
PRKDC-207ENST00000536483 CEACAM19Q7Z692 300 aa9.95□□□□□ -0.82
PRKDC-207ENST00000536483 TMEM219Q86XT9 240 aa9.95□□□□□ -0.82
PRKDC-207ENST00000536483 NDUFA11Q86Y39 141 aa9.95□□□□□ -0.82
PRKDC-207ENST00000536483 LINC00311Q8N616 119 aa9.95□□□□□ -0.82
PRKDC-207ENST00000536483 OR4F17Q8NGA8 305 aa9.95□□□□□ -0.82
PRKDC-207ENST00000536483 NDNFQ8TB73 568 aa9.95□□□□□ -0.82
PRKDC-207ENST00000536483 MRGPRDQ8TDS7 321 aa9.95□□□□□ -0.82
PRKDC-207ENST00000536483 UFD1Q92890 307 aa9.95□□□□□ -0.82
PRKDC-207ENST00000536483 OR4F4Q96R69 305 aa9.95□□□□□ -0.82
PRKDC-207ENST00000536483 CITED2Q99967 270 aaPredicted RBP9.95□□□□□ -0.82
PRKDC-207ENST00000536483 WNT10AQ9GZT5 417 aa9.95□□□□□ -0.82
PRKDC-207ENST00000536483 LIN7BQ9HAP6 207 aa9.95□□□□□ -0.82
PRKDC-207ENST00000536483 PLGRKTQ9HBL7 147 aa9.95□□□□□ -0.82
PRKDC-207ENST00000536483 PALMDQ9NP74 551 aa9.95□□□□□ -0.82
PRKDC-207ENST00000536483 MBNL3Q9NUK0 354 aaKnown RBP9.95□□□□□ -0.82
PRKDC-207ENST00000536483 PSG11Q9UQ72 335 aa9.95□□□□□ -0.82
PRKDC-207ENST00000536483 A3GALT2U3KPV4 340 aa9.95□□□□□ -0.82
PRKDC-207ENST00000536483 KIAA2026Q5HYC2 2103 aa9.95□□□□□ -0.82
PRKDC-207ENST00000536483 ADARB2-AS1A8MUL3 147 aa9.94□□□□□ -0.82
PRKDC-207ENST00000536483 SSTR5P35346 364 aa9.94□□□□□ -0.82
PRKDC-207ENST00000536483 ARHGDIBP52566 201 aa9.94□□□□□ -0.82
PRKDC-207ENST00000536483 QRFPP83859 136 aa9.94□□□□□ -0.82
PRKDC-207ENST00000536483 CTF1Q16619 201 aa9.94□□□□□ -0.82
PRKDC-207ENST00000536483 HSD17B12Q53GQ0 312 aa9.94□□□□□ -0.82
PRKDC-207ENST00000536483 FAM27D1Q5T7N8 215 aa9.94□□□□□ -0.82
PRKDC-207ENST00000536483 LIPKQ5VXJ0 399 aa9.94□□□□□ -0.82
PRKDC-207ENST00000536483 STEAP3Q658P3 488 aa9.94□□□□□ -0.82
PRKDC-207ENST00000536483 PHF21AQ96BD5 680 aa9.94□□□□□ -0.82
PRKDC-207ENST00000536483 TMED9Q9BVK6 235 aa9.94□□□□□ -0.82
PRKDC-207ENST00000536483 TM2D1Q9BX74 207 aa9.94□□□□□ -0.82
PRKDC-207ENST00000536483 PRSS22Q9GZN4 317 aa9.94□□□□□ -0.82
PRKDC-207ENST00000536483 CST11Q9H112 138 aa9.94□□□□□ -0.82
PRKDC-207ENST00000536483 AMMECR1Q9Y4X0 333 aaPredicted RBP9.94□□□□□ -0.82
PRKDC-207ENST00000536483 NBEAL2Q6ZNJ1 2754 aa9.93□□□□□ -0.82
PRKDC-207ENST00000536483 RYR3Q15413 4870 aa9.93□□□□□ -0.82
PRKDC-207ENST00000536483 TMEM14DPA8MWL7 114 aa9.93□□□□□ -0.82
PRKDC-207ENST00000536483 PDCD6O75340 191 aa9.93□□□□□ -0.82
PRKDC-207ENST00000536483 PEX14O75381 377 aa9.93□□□□□ -0.82
PRKDC-207ENST00000536483 OR2F2O95006 317 aa9.93□□□□□ -0.82
PRKDC-207ENST00000536483 VSIG8P0DPA2 414 aa9.93□□□□□ -0.82
PRKDC-207ENST00000536483 PSMB9P28065 219 aa9.93□□□□□ -0.82
PRKDC-207ENST00000536483 RAB7AP51149 207 aa9.93□□□□□ -0.82
PRKDC-207ENST00000536483 LY6G6FQ5SQ64 297 aa9.93□□□□□ -0.82
PRKDC-207ENST00000536483 ATAD3CQ5T2N8 411 aa9.93□□□□□ -0.82
PRKDC-207ENST00000536483 RAB12Q6IQ22 244 aa9.93□□□□□ -0.82
PRKDC-207ENST00000536483 TRAT1Q6PIZ9 186 aa9.93□□□□□ -0.82
PRKDC-207ENST00000536483 CD200R1LQ6Q8B3 271 aa9.93□□□□□ -0.82
PRKDC-207ENST00000536483 Q6ZS46 218 aa9.93□□□□□ -0.82
PRKDC-207ENST00000536483 OR8H3Q8N146 312 aa9.93□□□□□ -0.82
PRKDC-207ENST00000536483 RFESDQ8TAC1 157 aa9.93□□□□□ -0.82
PRKDC-207ENST00000536483 KCNG3Q8TAE7 436 aa9.93□□□□□ -0.82
PRKDC-207ENST00000536483 AKR1E2Q96JD6 320 aa9.93□□□□□ -0.82
PRKDC-207ENST00000536483 RBM14Q96PK6 669 aaKnown RBP9.93□□□□□ -0.82
PRKDC-207ENST00000536483 MGLLQ99685 303 aa9.93□□□□□ -0.82
PRKDC-207ENST00000536483 OCSTAMPQ9BR26 566 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 144.5 ms