RNA–Protein interactions for RNA: ENST00000536398.5

UBE3B-206, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-206ENST00000536398 LYG1Q8N1E2 194 aa11.4□□□□□ -0.58
UBE3B-206ENST00000536398 PRR18Q8N4B5 295 aa11.4□□□□□ -0.58
UBE3B-206ENST00000536398 DRAM1Q8N682 238 aa11.4□□□□□ -0.58
UBE3B-206ENST00000536398 OR10V1Q8NGI7 309 aa11.4□□□□□ -0.58
UBE3B-206ENST00000536398 OR56B4Q8NH76 319 aa11.4□□□□□ -0.58
UBE3B-206ENST00000536398 MRPL30Q8TCC3 161 aaKnown RBP11.4□□□□□ -0.58
UBE3B-206ENST00000536398 CAPSLQ8WWF8 208 aa11.4□□□□□ -0.58
UBE3B-206ENST00000536398 CFHR4Q92496 578 aa11.4□□□□□ -0.58
UBE3B-206ENST00000536398 TOMM40LQ969M1 308 aa11.4□□□□□ -0.58
UBE3B-206ENST00000536398 NICN1Q9BSH3 213 aa11.4□□□□□ -0.58
UBE3B-206ENST00000536398 FAAP24Q9BTP7 215 aa11.4□□□□□ -0.58
UBE3B-206ENST00000536398 CST11Q9H112 138 aa11.4□□□□□ -0.58
UBE3B-206ENST00000536398 GFOD1Q9NXC2 390 aa11.4□□□□□ -0.58
UBE3B-206ENST00000536398 WNK1Q9H4A3 2382 aa11.4□□□□□ -0.58
UBE3B-206ENST00000536398 TMEM14DPA8MWL7 114 aa11.39□□□□□ -0.59
UBE3B-206ENST00000536398 HBZP02008 142 aa11.39□□□□□ -0.59
UBE3B-206ENST00000536398 SNRNP70P08621 437 aaKnown RBP11.39□□□□□ -0.59
UBE3B-206ENST00000536398 UBBP0CG47 229 aa11.39□□□□□ -0.59
UBE3B-206ENST00000536398 CD28P10747 220 aa11.39□□□□□ -0.59
UBE3B-206ENST00000536398 CALRP27797 417 aaKnown RBP11.39□□□□□ -0.59
UBE3B-206ENST00000536398 CHATP28329 748 aa11.39□□□□□ -0.59
UBE3B-206ENST00000536398 REG1BP48304 166 aa11.39□□□□□ -0.59
UBE3B-206ENST00000536398 ZNF134P52741 427 aa11.39□□□□□ -0.59
UBE3B-206ENST00000536398 RPS27AP62979 156 aaKnown RBP11.39□□□□□ -0.59
UBE3B-206ENST00000536398 MADCAM1Q13477 382 aa11.39□□□□□ -0.59
UBE3B-206ENST00000536398 TBCEQ15813 527 aaPredicted RBP11.39□□□□□ -0.59
UBE3B-206ENST00000536398 SLC16A12Q6ZSM3 486 aa11.39□□□□□ -0.59
UBE3B-206ENST00000536398 Q6ZTK2 550 aa11.39□□□□□ -0.59
UBE3B-206ENST00000536398 ZNF367Q7RTV3 350 aa11.39□□□□□ -0.59
UBE3B-206ENST00000536398 C6orf201Q7Z4U5 140 aa11.39□□□□□ -0.59
UBE3B-206ENST00000536398 OR52M1Q8NGK5 317 aa11.39□□□□□ -0.59
UBE3B-206ENST00000536398 OR10X1Q8NGY0 326 aa11.39□□□□□ -0.59
UBE3B-206ENST00000536398 FAM110DQ8TAY7 271 aaPredicted RBP11.39□□□□□ -0.59
UBE3B-206ENST00000536398 RBM14Q96PK6 669 aaKnown RBP11.39□□□□□ -0.59
UBE3B-206ENST00000536398 OCSTAMPQ9BR26 566 aa11.39□□□□□ -0.59
UBE3B-206ENST00000536398 SLC25A33Q9BSK2 321 aa11.39□□□□□ -0.59
UBE3B-206ENST00000536398 TMEM59Q9BXS4 323 aa11.39□□□□□ -0.59
UBE3B-206ENST00000536398 LIN7BQ9HAP6 207 aa11.39□□□□□ -0.59
UBE3B-206ENST00000536398 AMMECR1Q9Y4X0 333 aaPredicted RBP11.39□□□□□ -0.59
UBE3B-206ENST00000536398 SHISA3A0PJX4 238 aa11.38□□□□□ -0.59
UBE3B-206ENST00000536398 FAM90A9PA6NNJ1 464 aa11.38□□□□□ -0.59
UBE3B-206ENST00000536398 OOSP1A8MZH6 123 aa11.38□□□□□ -0.59
UBE3B-206ENST00000536398 OR2F2O95006 317 aa11.38□□□□□ -0.59
UBE3B-206ENST00000536398 GLAP06280 429 aa11.38□□□□□ -0.59
UBE3B-206ENST00000536398 MNDAP41218 407 aa11.38□□□□□ -0.59
UBE3B-206ENST00000536398 CLDN12P56749 244 aa11.38□□□□□ -0.59
UBE3B-206ENST00000536398 PLA2G7Q13093 441 aa11.38□□□□□ -0.59
UBE3B-206ENST00000536398 HNF4GQ14541 408 aa11.38□□□□□ -0.59
UBE3B-206ENST00000536398 TRAM1Q15629 374 aa11.38□□□□□ -0.59
UBE3B-206ENST00000536398 ABCA11PQ4W5N1 156 aa11.38□□□□□ -0.59
UBE3B-206ENST00000536398 CCDC144NLQ6NUI1 221 aa11.38□□□□□ -0.59
UBE3B-206ENST00000536398 C11orf88Q6PI97 169 aa11.38□□□□□ -0.59
UBE3B-206ENST00000536398 Q6ZPA2 131 aa11.38□□□□□ -0.59
UBE3B-206ENST00000536398 OR6M1Q8NGM8 313 aa11.38□□□□□ -0.59
UBE3B-206ENST00000536398 WIPF2Q8TF74 440 aaPredicted RBP11.38□□□□□ -0.59
UBE3B-206ENST00000536398 TM2D1Q9BX74 207 aa11.38□□□□□ -0.59
UBE3B-206ENST00000536398 WNT10AQ9GZT5 417 aa11.38□□□□□ -0.59
UBE3B-206ENST00000536398 TAF9BQ9HBM6 251 aa11.38□□□□□ -0.59
UBE3B-206ENST00000536398 BLOC1S6Q9UL45 172 aa11.38□□□□□ -0.59
UBE3B-206ENST00000536398 IGHV3-72A0A0B4J1Y9 119 aa11.37□□□□□ -0.59
UBE3B-206ENST00000536398 SLC17A2O00624 439 aa11.37□□□□□ -0.59
UBE3B-206ENST00000536398 SOCS1O15524 211 aa11.37□□□□□ -0.59
UBE3B-206ENST00000536398 SPINT2O43291 252 aa11.37□□□□□ -0.59
UBE3B-206ENST00000536398 DENRO43583 198 aaKnown RBP11.37□□□□□ -0.59
UBE3B-206ENST00000536398 BPNT1O95861 308 aa11.37□□□□□ -0.59
UBE3B-206ENST00000536398 FAM106CPP0CH98 169 aa11.37□□□□□ -0.59
UBE3B-206ENST00000536398 PSMA1P25786 263 aaKnown RBP11.37□□□□□ -0.59
UBE3B-206ENST00000536398 VDAC2P45880 294 aaPredicted RBP11.37□□□□□ -0.59
UBE3B-206ENST00000536398 ARHGDIBP52566 201 aa11.37□□□□□ -0.59
UBE3B-206ENST00000536398 GNMTQ14749 295 aa11.37□□□□□ -0.59
UBE3B-206ENST00000536398 CT45A1Q5HYN5 189 aa11.37□□□□□ -0.59
UBE3B-206ENST00000536398 C6orf183Q5T699 404 aa11.37□□□□□ -0.59
UBE3B-206ENST00000536398 C16orf82Q7Z2V1 217 aa11.37□□□□□ -0.59
UBE3B-206ENST00000536398 LINC00311Q8N616 119 aa11.37□□□□□ -0.59
UBE3B-206ENST00000536398 ZNF439Q8NDP4 499 aa11.37□□□□□ -0.59
UBE3B-206ENST00000536398 OR52L2PQ8NGH6 319 aa11.37□□□□□ -0.59
UBE3B-206ENST00000536398 CT45A3Q8NHU0 189 aa11.37□□□□□ -0.59
UBE3B-206ENST00000536398 KCNG3Q8TAE7 436 aa11.37□□□□□ -0.59
UBE3B-206ENST00000536398 NEDD4LQ96PU5 975 aa11.37□□□□□ -0.59
UBE3B-206ENST00000536398 LPAR5Q9H1C0 372 aa11.37□□□□□ -0.59
UBE3B-206ENST00000536398 MMP27Q9H306 513 aa11.37□□□□□ -0.59
UBE3B-206ENST00000536398 PLGRKTQ9HBL7 147 aa11.37□□□□□ -0.59
UBE3B-206ENST00000536398 MBNL3Q9NUK0 354 aaKnown RBP11.37□□□□□ -0.59
UBE3B-206ENST00000536398 H3BUI4 141 aa11.36□□□□□ -0.59
UBE3B-206ENST00000536398 CCRL2O00421 344 aa11.36□□□□□ -0.59
UBE3B-206ENST00000536398 HSD17B6O14756 317 aa11.36□□□□□ -0.59
UBE3B-206ENST00000536398 CA11O75493 328 aa11.36□□□□□ -0.59
UBE3B-206ENST00000536398 ARL6IP5O75915 188 aa11.36□□□□□ -0.59
UBE3B-206ENST00000536398 LPLP06858 475 aa11.36□□□□□ -0.59
UBE3B-206ENST00000536398 CSF1P09603 554 aa11.36□□□□□ -0.59
UBE3B-206ENST00000536398 ARSBP15848 533 aa11.36□□□□□ -0.59
UBE3B-206ENST00000536398 BLVRBP30043 206 aaPredicted RBP11.36□□□□□ -0.59
UBE3B-206ENST00000536398 RAB7AP51149 207 aa11.36□□□□□ -0.59
UBE3B-206ENST00000536398 GABARAPL2P60520 117 aa11.36□□□□□ -0.59
UBE3B-206ENST00000536398 HES1Q14469 280 aa11.36□□□□□ -0.59
UBE3B-206ENST00000536398 RAB11BQ15907 218 aa11.36□□□□□ -0.59
UBE3B-206ENST00000536398 ARSJQ5FYB0 599 aaPredicted RBP11.36□□□□□ -0.59
UBE3B-206ENST00000536398 C9orf152Q5JTZ5 239 aa11.36□□□□□ -0.59
UBE3B-206ENST00000536398 HES5Q5TA89 166 aa11.36□□□□□ -0.59
UBE3B-206ENST00000536398 MOB3BQ86TA1 216 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms