RNA–Protein interactions for RNA: ENST00000535313.1

CLSTN3-204, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 787 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-204ENST00000535313 DUS4LO95620 317 aaKnown RBP12.82□□□□□ -0.36
CLSTN3-204ENST00000535313 MAS1P04201 325 aa12.82□□□□□ -0.36
CLSTN3-204ENST00000535313 CAPGP40121 348 aa12.82□□□□□ -0.36
CLSTN3-204ENST00000535313 SLC35B1P78383 322 aa12.82□□□□□ -0.36
CLSTN3-204ENST00000535313 SLC35E3Q7Z769 313 aa12.82□□□□□ -0.36
CLSTN3-204ENST00000535313 FOXRED2Q8IWF2 684 aa12.82□□□□□ -0.36
CLSTN3-204ENST00000535313 CDH26Q8IXH8 852 aa12.82□□□□□ -0.36
CLSTN3-204ENST00000535313 OR51D1Q8NGF3 324 aa12.82□□□□□ -0.36
CLSTN3-204ENST00000535313 THRSPQ92748 146 aa12.82□□□□□ -0.36
CLSTN3-204ENST00000535313 NOL4LQ96MY1 436 aaPredicted RBP12.82□□□□□ -0.36
CLSTN3-204ENST00000535313 ETAA1Q9NY74 926 aa12.82□□□□□ -0.36
CLSTN3-204ENST00000535313 RCC2Q9P258 522 aaKnown RBP12.82□□□□□ -0.36
CLSTN3-204ENST00000535313 IGHV3-43A0A0B4J1X8 118 aa12.81□□□□□ -0.36
CLSTN3-204ENST00000535313 IGHV3-72A0A0B4J1Y9 119 aa12.81□□□□□ -0.36
CLSTN3-204ENST00000535313 NCBP2LA6PVI3 153 aaKnown RBP12.81□□□□□ -0.36
CLSTN3-204ENST00000535313 IGHV3-43DP0DP04 118 aa12.81□□□□□ -0.36
CLSTN3-204ENST00000535313 CELP19835 753 aa12.81□□□□□ -0.36
CLSTN3-204ENST00000535313 WNT4P56705 351 aa12.81□□□□□ -0.36
CLSTN3-204ENST00000535313 DOC2BQ14184 412 aa12.81□□□□□ -0.36
CLSTN3-204ENST00000535313 EBI3Q14213 229 aa12.81□□□□□ -0.36
CLSTN3-204ENST00000535313 Q3ZCU0 254 aa12.81□□□□□ -0.36
CLSTN3-204ENST00000535313 C6orf183Q5T699 404 aa12.81□□□□□ -0.36
CLSTN3-204ENST00000535313 SYT6Q5T7P8 510 aaPredicted RBP12.81□□□□□ -0.36
CLSTN3-204ENST00000535313 RAB12Q6IQ22 244 aa12.81□□□□□ -0.36
CLSTN3-204ENST00000535313 LAIR2Q6ISS4 152 aa12.81□□□□□ -0.36
CLSTN3-204ENST00000535313 AHSA2Q719I0 299 aa12.81□□□□□ -0.36
CLSTN3-204ENST00000535313 IZUMO1Q8IYV9 350 aa12.81□□□□□ -0.36
CLSTN3-204ENST00000535313 OR2T10Q8NGZ9 312 aa12.81□□□□□ -0.36
CLSTN3-204ENST00000535313 EAF1Q96JC9 268 aaPredicted RBP12.81□□□□□ -0.36
CLSTN3-204ENST00000535313 DERL3Q96Q80 235 aa12.81□□□□□ -0.36
CLSTN3-204ENST00000535313 SELENOIQ9C0D9 397 aa12.81□□□□□ -0.36
CLSTN3-204ENST00000535313 GNG12Q9UBI6 72 aa12.81□□□□□ -0.36
CLSTN3-204ENST00000535313 PSORS1C1Q9UIG5 152 aa12.81□□□□□ -0.36
CLSTN3-204ENST00000535313 PEX16Q9Y5Y5 336 aa12.81□□□□□ -0.36
CLSTN3-204ENST00000535313 FAM90A10PA6NDY2 464 aa12.8□□□□□ -0.36
CLSTN3-204ENST00000535313 FAM90A7PA6NKC0 464 aa12.8□□□□□ -0.36
CLSTN3-204ENST00000535313 FAM90A23PA8MXZ1 464 aa12.8□□□□□ -0.36
CLSTN3-204ENST00000535313 C12orf77C9JDV5 145 aa12.8□□□□□ -0.36
CLSTN3-204ENST00000535313 CRTAPO75718 401 aaPredicted RBP12.8□□□□□ -0.36
CLSTN3-204ENST00000535313 IGHG2P01859 326 aa12.8□□□□□ -0.36
CLSTN3-204ENST00000535313 CD1AP06126 327 aa12.8□□□□□ -0.36
CLSTN3-204ENST00000535313 MAPK3P27361 379 aaPredicted RBP12.8□□□□□ -0.36
CLSTN3-204ENST00000535313 RPL23AP62750 156 aaKnown RBP12.8□□□□□ -0.36
CLSTN3-204ENST00000535313 TMEM30BQ3MIR4 351 aa12.8□□□□□ -0.36
CLSTN3-204ENST00000535313 TRAT1Q6PIZ9 186 aa12.8□□□□□ -0.36
CLSTN3-204ENST00000535313 TGIF2LXQ8IUE1 241 aa12.8□□□□□ -0.36
CLSTN3-204ENST00000535313 PRR18Q8N4B5 295 aa12.8□□□□□ -0.36
CLSTN3-204ENST00000535313 COMMD1Q8N668 190 aa12.8□□□□□ -0.36
CLSTN3-204ENST00000535313 NKAIN3Q8N8D7 197 aa12.8□□□□□ -0.36
CLSTN3-204ENST00000535313 BPIFB6Q8NFQ5 453 aa12.8□□□□□ -0.36
CLSTN3-204ENST00000535313 OR4K15Q8NH41 348 aa12.8□□□□□ -0.36
CLSTN3-204ENST00000535313 RTN4IP1Q8WWV3 396 aaPredicted RBP12.8□□□□□ -0.36
CLSTN3-204ENST00000535313 BANF2Q9H503 90 aa12.8□□□□□ -0.36
CLSTN3-204ENST00000535313 ZFP57Q9NU63 452 aa12.8□□□□□ -0.36
CLSTN3-204ENST00000535313 LINC00527Q9UJ94 153 aa12.8□□□□□ -0.36
CLSTN3-204ENST00000535313 ERGIC3Q9Y282 383 aa12.8□□□□□ -0.36
CLSTN3-204ENST00000535313 NUDT19A8MXV4 375 aa12.79□□□□□ -0.36
CLSTN3-204ENST00000535313 TXNL1O43396 289 aa12.79□□□□□ -0.36
CLSTN3-204ENST00000535313 CA11O75493 328 aa12.79□□□□□ -0.36
CLSTN3-204ENST00000535313 MPIG6BO95866 241 aa12.79□□□□□ -0.36
CLSTN3-204ENST00000535313 MGMTP16455 207 aa12.79□□□□□ -0.36
CLSTN3-204ENST00000535313 FUT3P21217 361 aa12.79□□□□□ -0.36
CLSTN3-204ENST00000535313 CD1BP29016 333 aa12.79□□□□□ -0.36
CLSTN3-204ENST00000535313 SLC6A1P30531 599 aa12.79□□□□□ -0.36
CLSTN3-204ENST00000535313 FAM53AQ6NSI3 398 aaPredicted RBP12.79□□□□□ -0.36
CLSTN3-204ENST00000535313 OR2W3Q7Z3T1 314 aa12.79□□□□□ -0.36
CLSTN3-204ENST00000535313 STPG2Q8N412 459 aa12.79□□□□□ -0.36
CLSTN3-204ENST00000535313 TFAP2CQ92754 450 aa12.79□□□□□ -0.36
CLSTN3-204ENST00000535313 ST6GALNAC6Q969X2 333 aa12.79□□□□□ -0.36
CLSTN3-204ENST00000535313 UQCC2Q9BRT2 126 aa12.79□□□□□ -0.36
CLSTN3-204ENST00000535313 GPR61Q9BZJ8 451 aa12.79□□□□□ -0.36
CLSTN3-204ENST00000535313 VCXQ9H320 206 aa12.79□□□□□ -0.36
CLSTN3-204ENST00000535313 PLCXD1Q9NUJ7 323 aa12.79□□□□□ -0.36
CLSTN3-204ENST00000535313 LIN7CQ9NUP9 197 aaKnown RBP12.79□□□□□ -0.36
CLSTN3-204ENST00000535313 AP4M1O00189 453 aa12.78□□□□□ -0.36
CLSTN3-204ENST00000535313 MOSP00540 346 aa12.78□□□□□ -0.36
CLSTN3-204ENST00000535313 HBZP02008 142 aa12.78□□□□□ -0.36
CLSTN3-204ENST00000535313 GLAP06280 429 aa12.78□□□□□ -0.36
CLSTN3-204ENST00000535313 SLC25A48Q6ZT89 311 aaKnown RBP12.78□□□□□ -0.36
CLSTN3-204ENST00000535313 Q8N6K4 173 aa12.78□□□□□ -0.36
CLSTN3-204ENST00000535313 NANOGP1Q8N7R0 232 aa12.78□□□□□ -0.36
CLSTN3-204ENST00000535313 LINC00482Q8N8I6 264 aa12.78□□□□□ -0.36
CLSTN3-204ENST00000535313 TMEM104Q8NE00 496 aa12.78□□□□□ -0.36
CLSTN3-204ENST00000535313 OR10V1Q8NGI7 309 aa12.78□□□□□ -0.36
CLSTN3-204ENST00000535313 OR1L1Q8NH94 360 aa12.78□□□□□ -0.36
CLSTN3-204ENST00000535313 FBLIM1Q8WUP2 373 aa12.78□□□□□ -0.36
CLSTN3-204ENST00000535313 DPF1Q92782 380 aa12.78□□□□□ -0.36
CLSTN3-204ENST00000535313 GON7Q9BXV9 100 aa12.78□□□□□ -0.36
CLSTN3-204ENST00000535313 KCNIP1Q9NZI2 227 aa12.78□□□□□ -0.36
CLSTN3-204ENST00000535313 GHRLQ9UBU3 117 aa12.78□□□□□ -0.36
CLSTN3-204ENST00000535313 UBE2QL1A1L167 161 aa12.77□□□□□ -0.37
CLSTN3-204ENST00000535313 SLC31A2O15432 143 aa12.77□□□□□ -0.37
CLSTN3-204ENST00000535313 RCC1P18754 421 aaPredicted RBP12.77□□□□□ -0.37
CLSTN3-204ENST00000535313 GPR12P47775 334 aa12.77□□□□□ -0.37
CLSTN3-204ENST00000535313 THBS3P49746 956 aa12.77□□□□□ -0.37
CLSTN3-204ENST00000535313 GPR50Q13585 617 aa12.77□□□□□ -0.37
CLSTN3-204ENST00000535313 STEAP3Q658P3 488 aa12.77□□□□□ -0.37
CLSTN3-204ENST00000535313 TEX38Q6PEX7 206 aa12.77□□□□□ -0.37
CLSTN3-204ENST00000535313 IZUMO2Q6UXV1 221 aa12.77□□□□□ -0.37
CLSTN3-204ENST00000535313 LYPD6Q86Y78 171 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms