RNA–Protein interactions for RNA: ENST00000535236.5

SFSWAP-203, Transcript of splicing factor SWAP, humanhuman

TSL 1 (best)

Gene SFSWAP, Length 5,593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-203ENST00000535236 RNFT1Q5M7Z0 435 aa15.84■□□□□ 0.13
SFSWAP-203ENST00000535236 SPANXN1Q5VSR9 72 aa15.84■□□□□ 0.13
SFSWAP-203ENST00000535236 EBLN2Q6P2I7 272 aa15.84■□□□□ 0.13
SFSWAP-203ENST00000535236 ZNF207O43670 478 aaKnown RBP15.84■□□□□ 0.13
SFSWAP-203ENST00000535236 PDE6DO43924 150 aa15.84■□□□□ 0.13
SFSWAP-203ENST00000535236 EWSR1Q01844 656 aaKnown RBP eCLIP15.84■□□□□ 0.13
SFSWAP-203ENST00000535236 COL13A1Q5TAT6 717 aaPredicted RBP15.84■□□□□ 0.13
SFSWAP-203ENST00000535236 ZNF107Q9UII5 783 aaPredicted RBP15.84■□□□□ 0.13
SFSWAP-203ENST00000535236 MRPS18BQ9Y676 258 aaKnown RBP15.84■□□□□ 0.13
SFSWAP-203ENST00000535236 SNRPEP62304 92 aaKnown RBP15.84■□□□□ 0.13
SFSWAP-203ENST00000535236 UPK3AO75631 287 aa15.84■□□□□ 0.13
SFSWAP-203ENST00000535236 GAPDHP04406 335 aaKnown RBP15.84■□□□□ 0.13
SFSWAP-203ENST00000535236 FAM106CPP0CH98 169 aa15.84■□□□□ 0.13
SFSWAP-203ENST00000535236 NSUN5P2Q63ZY6 315 aa15.84■□□□□ 0.13
SFSWAP-203ENST00000535236 MRPL54Q6P161 138 aaKnown RBP15.84■□□□□ 0.13
SFSWAP-203ENST00000535236 SHISA5Q8N114 240 aa15.84■□□□□ 0.13
SFSWAP-203ENST00000535236 ZNF488Q96MN9 340 aa15.84■□□□□ 0.13
SFSWAP-203ENST00000535236 DTX4Q9Y2E6 619 aa15.84■□□□□ 0.13
SFSWAP-203ENST00000535236 F5P12259 2224 aa15.83■□□□□ 0.13
SFSWAP-203ENST00000535236 A0A0J9YW62 118 aa15.83■□□□□ 0.13
SFSWAP-203ENST00000535236 VSIG8P0DPA2 414 aa15.83■□□□□ 0.13
SFSWAP-203ENST00000535236 UCP2P55851 309 aa15.83■□□□□ 0.13
SFSWAP-203ENST00000535236 TMEM255AQ5JRV8 349 aa15.83■□□□□ 0.13
SFSWAP-203ENST00000535236 MYOZ3Q8TDC0 251 aa15.83■□□□□ 0.13
SFSWAP-203ENST00000535236 CHODLQ9H9P2 273 aa15.83■□□□□ 0.13
SFSWAP-203ENST00000535236 TMSB15BA0A087X1C1 80 aa15.83■□□□□ 0.12
SFSWAP-203ENST00000535236 PAGE4O60829 102 aa15.83■□□□□ 0.12
SFSWAP-203ENST00000535236 LRRC75BQ2VPJ9 315 aa15.83■□□□□ 0.12
SFSWAP-203ENST00000535236 SP7Q8TDD2 431 aaPredicted RBP15.83■□□□□ 0.12
SFSWAP-203ENST00000535236 SCMH1Q96GD3 660 aa15.83■□□□□ 0.12
SFSWAP-203ENST00000535236 IGHV1-45A0A0A0MS14 117 aa15.83■□□□□ 0.12
SFSWAP-203ENST00000535236 NKX2-8O15522 239 aa15.83■□□□□ 0.12
SFSWAP-203ENST00000535236 CDS2O95674 445 aa15.83■□□□□ 0.12
SFSWAP-203ENST00000535236 TFPI2P48307 235 aa15.83■□□□□ 0.12
SFSWAP-203ENST00000535236 TMEM50BP56557 158 aa15.83■□□□□ 0.12
SFSWAP-203ENST00000535236 LYZL2Q7Z4W2 148 aa15.83■□□□□ 0.12
SFSWAP-203ENST00000535236 TMEM52Q8NDY8 209 aa15.83■□□□□ 0.12
SFSWAP-203ENST00000535236 GPX7Q96SL4 187 aaPredicted RBP15.83■□□□□ 0.12
SFSWAP-203ENST00000535236 GHITMQ9H3K2 345 aa15.83■□□□□ 0.12
SFSWAP-203ENST00000535236 TMEM251Q8N6I4 163 aa15.83■□□□□ 0.12
SFSWAP-203ENST00000535236 PRDM14Q9GZV8 571 aa15.83■□□□□ 0.12
SFSWAP-203ENST00000535236 CACNA1CQ13936 2221 aa15.82■□□□□ 0.12
SFSWAP-203ENST00000535236 AHRRA9YTQ3 701 aa15.82■□□□□ 0.12
SFSWAP-203ENST00000535236 CORTO00230 105 aa15.82■□□□□ 0.12
SFSWAP-203ENST00000535236 RBM11P57052 281 aaKnown RBP15.82■□□□□ 0.12
SFSWAP-203ENST00000535236 OR1K1Q8NGR3 316 aa15.82■□□□□ 0.12
SFSWAP-203ENST00000535236 PLAC1Q9HBJ0 212 aa15.82■□□□□ 0.12
SFSWAP-203ENST00000535236 MMP16P51512 607 aa15.82■□□□□ 0.12
SFSWAP-203ENST00000535236 C19orf57Q0VDD7 668 aa15.82■□□□□ 0.12
SFSWAP-203ENST00000535236 GBGT1Q8N5D6 347 aa15.82■□□□□ 0.12
SFSWAP-203ENST00000535236 ZNF519Q8TB69 540 aa15.82■□□□□ 0.12
SFSWAP-203ENST00000535236 SLC25A33Q9BSK2 321 aa15.82■□□□□ 0.12
SFSWAP-203ENST00000535236 DDA1Q9BW61 102 aa15.82■□□□□ 0.12
SFSWAP-203ENST00000535236 NHSL1Q5SYE7 1610 aa15.82■□□□□ 0.12
SFSWAP-203ENST00000535236 BRWD1Q9NSI6 2320 aa15.82■□□□□ 0.12
SFSWAP-203ENST00000535236 MGST3O14880 152 aa15.82■□□□□ 0.12
SFSWAP-203ENST00000535236 PF4V1P10720 104 aa15.82■□□□□ 0.12
SFSWAP-203ENST00000535236 ADAT3Q96EY9 351 aaPredicted RBP15.82■□□□□ 0.12
SFSWAP-203ENST00000535236 ANGPTL4Q9BY76 406 aa15.82■□□□□ 0.12
SFSWAP-203ENST00000535236 RCC2Q9P258 522 aaKnown RBP15.82■□□□□ 0.12
SFSWAP-203ENST00000535236 NEU3Q9UQ49 428 aa15.82■□□□□ 0.12
SFSWAP-203ENST00000535236 PRR33A8MZF0 331 aa15.82■□□□□ 0.12
SFSWAP-203ENST00000535236 HPRT1P00492 218 aa15.82■□□□□ 0.12
SFSWAP-203ENST00000535236 RRN3P1Q2M238 152 aa15.82■□□□□ 0.12
SFSWAP-203ENST00000535236 MARS2Q96GW9 593 aaKnown RBP15.82■□□□□ 0.12
SFSWAP-203ENST00000535236 TMEM140Q9NV12 185 aa15.82■□□□□ 0.12
SFSWAP-203ENST00000535236 SRSF9Q13242 221 aaKnown RBP eCLIP15.81■□□□□ 0.122e-6■□□□□ 9
SFSWAP-203ENST00000535236 OR2V2Q96R30 315 aa15.81■□□□□ 0.12
SFSWAP-203ENST00000535236 TRAV8-7A0A075B6U6 113 aa15.81■□□□□ 0.12
SFSWAP-203ENST00000535236 KLF9Q13886 244 aaPredicted RBP15.81■□□□□ 0.12
SFSWAP-203ENST00000535236 CISD1Q9NZ45 108 aaKnown RBP15.81■□□□□ 0.12
SFSWAP-203ENST00000535236 MAP1BP46821 2468 aaKnown RBP15.81■□□□□ 0.12
SFSWAP-203ENST00000535236 M0R143 59 aa15.81■□□□□ 0.12
SFSWAP-203ENST00000535236 HYPMO75409 117 aa15.81■□□□□ 0.12
SFSWAP-203ENST00000535236 PGA4P0DJD7 388 aa15.81■□□□□ 0.12
SFSWAP-203ENST00000535236 PGA5P0DJD9 388 aa15.81■□□□□ 0.12
SFSWAP-203ENST00000535236 RPL27AP46776 148 aaKnown RBP15.81■□□□□ 0.12
SFSWAP-203ENST00000535236 FAM27BQ5VT28 67 aa15.81■□□□□ 0.12
SFSWAP-203ENST00000535236 BVESQ8NE79 360 aa15.81■□□□□ 0.12
SFSWAP-203ENST00000535236 OR2D3Q8NGH3 330 aa15.81■□□□□ 0.12
SFSWAP-203ENST00000535236 CDK5RAP2Q96SN8 1893 aa15.81■□□□□ 0.12
SFSWAP-203ENST00000535236 BET1LQ9NYM9 111 aa15.81■□□□□ 0.12
SFSWAP-203ENST00000535236 ISLRO14498 428 aa15.81■□□□□ 0.12
SFSWAP-203ENST00000535236 MOSPD3O75425 235 aa15.81■□□□□ 0.12
SFSWAP-203ENST00000535236 CLDN18P56856 261 aa15.81■□□□□ 0.12
SFSWAP-203ENST00000535236 PRNTQ86SH4 94 aa15.81■□□□□ 0.12
SFSWAP-203ENST00000535236 LRRC75AQ8NAA5 344 aa15.81■□□□□ 0.12
SFSWAP-203ENST00000535236 ZNF735P0CB33 412 aa15.8■□□□□ 0.12
SFSWAP-203ENST00000535236 ZP4Q12836 540 aa15.8■□□□□ 0.12
SFSWAP-203ENST00000535236 CALHM1Q8IU99 346 aa15.8■□□□□ 0.12
SFSWAP-203ENST00000535236 PIMREGQ9BSJ6 248 aa15.8■□□□□ 0.12
SFSWAP-203ENST00000535236 PAXXQ9BUH6 204 aa15.8■□□□□ 0.12
SFSWAP-203ENST00000535236 MYH14Q7Z406 1995 aaKnown RBP15.8■□□□□ 0.12
SFSWAP-203ENST00000535236 SS18L1O75177 396 aaPredicted RBP15.8■□□□□ 0.12
SFSWAP-203ENST00000535236 RPL29P47914 159 aaKnown RBP15.8■□□□□ 0.12
SFSWAP-203ENST00000535236 FOXL2P58012 376 aa15.8■□□□□ 0.12
SFSWAP-203ENST00000535236 PSG4Q00888 419 aa15.8■□□□□ 0.12
SFSWAP-203ENST00000535236 CEACAM21Q3KPI0 293 aa15.8■□□□□ 0.12
SFSWAP-203ENST00000535236 LDLRAD3Q86YD5 345 aa15.8■□□□□ 0.12
SFSWAP-203ENST00000535236 ADAD2Q8NCV1 583 aaKnown RBP15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms