RNA–Protein interactions for RNA: ENST00000534705.5

USP48-215, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 566 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-215ENST00000534705 DSPPQ9NZW4 1301 aa2.61□□□□□ -1.99
USP48-215ENST00000534705 LRRK2Q5S007 2527 aa2.61□□□□□ -1.99
USP48-215ENST00000534705 DCHS2Q6V1P9 2916 aa2.6□□□□□ -1.99
USP48-215ENST00000534705 PKDREJQ9NTG1 2253 aa2.6□□□□□ -1.99
USP48-215ENST00000534705 IGLV3-12A0A075B6K2 115 aa2.6□□□□□ -1.99
USP48-215ENST00000534705 A0A1B0GTH9 108 aa2.6□□□□□ -1.99
USP48-215ENST00000534705 A0A1B0GW55 424 aa2.6□□□□□ -1.99
USP48-215ENST00000534705 TRDV1A0A1B0GX56 115 aa2.6□□□□□ -1.99
USP48-215ENST00000534705 ARRDC5A6NEK1 342 aa2.6□□□□□ -1.99
USP48-215ENST00000534705 VSTM2BA6NLU5 285 aa2.6□□□□□ -1.99
USP48-215ENST00000534705 A8MT66 165 aa2.6□□□□□ -1.99
USP48-215ENST00000534705 ZNF724A8MTY0 619 aa2.6□□□□□ -1.99
USP48-215ENST00000534705 SERPINE3A8MV23 424 aa2.6□□□□□ -1.99
USP48-215ENST00000534705 SNRPGP15A8MWD9 76 aa2.6□□□□□ -1.99
USP48-215ENST00000534705 C1orf196B1AJZ1 125 aa2.6□□□□□ -1.99
USP48-215ENST00000534705 E7EQ34 232 aa2.6□□□□□ -1.99
USP48-215ENST00000534705 H0YGG7 62 aa2.6□□□□□ -1.99
USP48-215ENST00000534705 K7EP13 123 aa2.6□□□□□ -1.99
USP48-215ENST00000534705 GPR31O00270 319 aa2.6□□□□□ -1.99
USP48-215ENST00000534705 ZNF593O00488 134 aaPredicted RBP2.6□□□□□ -1.99
USP48-215ENST00000534705 CASKO14936 926 aa2.6□□□□□ -1.99
USP48-215ENST00000534705 TAPBPO15533 448 aa2.6□□□□□ -1.99
USP48-215ENST00000534705 RS1O15537 224 aa2.6□□□□□ -1.99
USP48-215ENST00000534705 CHST10O43529 356 aa2.6□□□□□ -1.99
USP48-215ENST00000534705 GSTZ1O43708 216 aaPredicted RBP2.6□□□□□ -1.99
USP48-215ENST00000534705 SLC19A2O60779 497 aa2.6□□□□□ -1.99
USP48-215ENST00000534705 CTNSO60931 367 aa2.6□□□□□ -1.99
USP48-215ENST00000534705 PPBPP02775 128 aa2.6□□□□□ -1.99
USP48-215ENST00000534705 CATP04040 527 aaKnown RBP2.6□□□□□ -1.99
USP48-215ENST00000534705 TCRBP04435 133 aa2.6□□□□□ -1.99
USP48-215ENST00000534705 RPN2P04844 631 aa2.6□□□□□ -1.99
USP48-215ENST00000534705 IGF1P05019 195 aa2.6□□□□□ -1.99
USP48-215ENST00000534705 C8GP07360 202 aa2.6□□□□□ -1.99
USP48-215ENST00000534705 TSPAN19P0C672 248 aa2.6□□□□□ -1.99
USP48-215ENST00000534705 METTL15P1P0C7V9 234 aa2.6□□□□□ -1.99
USP48-215ENST00000534705 UBBP0CG47 229 aa2.6□□□□□ -1.99
USP48-215ENST00000534705 UBCP0CG48 685 aaKnown RBP2.6□□□□□ -1.99
USP48-215ENST00000534705 DUX4L2P0CJ85 424 aa2.6□□□□□ -1.99
USP48-215ENST00000534705 DUX4L3P0CJ86 424 aa2.6□□□□□ -1.99
USP48-215ENST00000534705 DUX4L4P0CJ87 422 aa2.6□□□□□ -1.99
USP48-215ENST00000534705 DUX4L5P0CJ88 424 aa2.6□□□□□ -1.99
USP48-215ENST00000534705 DUX4L6P0CJ89 424 aa2.6□□□□□ -1.99
USP48-215ENST00000534705 DUX4L7P0CJ90 424 aa2.6□□□□□ -1.99
USP48-215ENST00000534705 SMIM10L1P0DMW3 83 aa2.6□□□□□ -1.99
USP48-215ENST00000534705 BCKDHAP12694 445 aa2.6□□□□□ -1.99
USP48-215ENST00000534705 MGMTP16455 207 aa2.6□□□□□ -1.99
USP48-215ENST00000534705 PRPS1L1P21108 318 aa2.6□□□□□ -1.99
USP48-215ENST00000534705 CNR1P21554 472 aa2.6□□□□□ -1.99
USP48-215ENST00000534705 NFYAP23511 347 aaPredicted RBP2.6□□□□□ -1.99
USP48-215ENST00000534705 MMP11P24347 488 aa2.6□□□□□ -1.99
USP48-215ENST00000534705 CD80P33681 288 aa2.6□□□□□ -1.99
USP48-215ENST00000534705 SDC2P34741 201 aa2.6□□□□□ -1.99
USP48-215ENST00000534705 MAP3K8P41279 467 aa2.6□□□□□ -1.99
USP48-215ENST00000534705 P2RY1P47900 373 aa2.6□□□□□ -1.99
USP48-215ENST00000534705 UQCRFS1P47985 274 aa2.6□□□□□ -1.99
USP48-215ENST00000534705 GNG10P50151 68 aa2.6□□□□□ -1.99
USP48-215ENST00000534705 VSX2P58304 361 aaPredicted RBP2.6□□□□□ -1.99
USP48-215ENST00000534705 RAB2AP61019 212 aa2.6□□□□□ -1.99
USP48-215ENST00000534705 RAB10P61026 200 aa2.6□□□□□ -1.99
USP48-215ENST00000534705 SNRPGP62308 76 aaKnown RBP2.6□□□□□ -1.99
USP48-215ENST00000534705 TBPL1P62380 186 aa2.6□□□□□ -1.99
USP48-215ENST00000534705 RPS27AP62979 156 aaKnown RBP2.6□□□□□ -1.99
USP48-215ENST00000534705 UBA52P62987 128 aaKnown RBP2.6□□□□□ -1.99
USP48-215ENST00000534705 CSNK1G2P78368 415 aa2.6□□□□□ -1.99
USP48-215ENST00000534705 FABP9Q0Z7S8 132 aa2.6□□□□□ -1.99
USP48-215ENST00000534705 ST3GAL4Q11206 333 aa2.6□□□□□ -1.99
USP48-215ENST00000534705 SLAQ13239 276 aa2.6□□□□□ -1.99
USP48-215ENST00000534705 ZNF345Q14585 488 aa2.6□□□□□ -1.99
USP48-215ENST00000534705 PEA15Q15121 130 aa2.6□□□□□ -1.99
USP48-215ENST00000534705 RAB35Q15286 201 aa2.6□□□□□ -1.99
USP48-215ENST00000534705 OR4D1Q15615 310 aa2.6□□□□□ -1.99
USP48-215ENST00000534705 MPPED2Q15777 294 aa2.6□□□□□ -1.99
USP48-215ENST00000534705 ECSCRQ19T08 205 aa2.6□□□□□ -1.99
USP48-215ENST00000534705 DEFB109BQ30KR1 87 aa2.6□□□□□ -1.99
USP48-215ENST00000534705 C18orf21Q32NC0 220 aaPredicted RBP2.6□□□□□ -1.99
USP48-215ENST00000534705 UNC50Q53HI1 259 aa2.6□□□□□ -1.99
USP48-215ENST00000534705 LINC00242Q5T6M2 205 aa2.6□□□□□ -1.99
USP48-215ENST00000534705 TRIQKQ629K1 86 aa2.6□□□□□ -1.99
USP48-215ENST00000534705 OR2T5Q6IEZ7 315 aa2.6□□□□□ -1.99
USP48-215ENST00000534705 H3F3CQ6NXT2 135 aa2.6□□□□□ -1.99
USP48-215ENST00000534705 MED27Q6P2C8 311 aa2.6□□□□□ -1.99
USP48-215ENST00000534705 CNIH2Q6PI25 160 aa2.6□□□□□ -1.99
USP48-215ENST00000534705 AGTRAPQ6RW13 159 aa2.6□□□□□ -1.99
USP48-215ENST00000534705 DNM1P46Q6ZS02 220 aa2.6□□□□□ -1.99
USP48-215ENST00000534705 LANCL3Q6ZV70 420 aa2.6□□□□□ -1.99
USP48-215ENST00000534705 PRSS41Q7RTY9 318 aa2.6□□□□□ -1.99
USP48-215ENST00000534705 NUFIP2Q7Z417 695 aaKnown RBP2.6□□□□□ -1.99
USP48-215ENST00000534705 DPPA2Q7Z7J5 298 aa2.6□□□□□ -1.99
USP48-215ENST00000534705 OAFQ86UD1 273 aa2.6□□□□□ -1.99
USP48-215ENST00000534705 LRRC28Q86X40 367 aaPredicted RBP2.6□□□□□ -1.99
USP48-215ENST00000534705 CBLN2Q8IUK8 224 aa2.6□□□□□ -1.99
USP48-215ENST00000534705 C9orf40Q8IXQ3 194 aa2.6□□□□□ -1.99
USP48-215ENST00000534705 SLC35F2Q8IXU6 374 aa2.6□□□□□ -1.99
USP48-215ENST00000534705 SLC34A3Q8N130 599 aa2.6□□□□□ -1.99
USP48-215ENST00000534705 FTMTQ8N4E7 242 aa2.6□□□□□ -1.99
USP48-215ENST00000534705 ARIH2OSQ8N7S6 290 aa2.6□□□□□ -1.99
USP48-215ENST00000534705 ZSCAN4Q8NAM6 433 aaPredicted RBP2.6□□□□□ -1.99
USP48-215ENST00000534705 ZNF740Q8NDX6 193 aa2.6□□□□□ -1.99
USP48-215ENST00000534705 TMEM104Q8NE00 496 aa2.6□□□□□ -1.99
USP48-215ENST00000534705 C19orf18Q8NEA5 215 aa2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms