RNA–Protein interactions for RNA: ENST00000534699.5

CSDE1-217, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CSDE1, Length 2,667 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-217ENST00000534699 MYF6P23409 242 aa8.27□□□□□ -1.08
CSDE1-217ENST00000534699 MYCNOSP40205 109 aa8.27□□□□□ -1.08
CSDE1-217ENST00000534699 SLC35A2P78381 396 aa8.27□□□□□ -1.08
CSDE1-217ENST00000534699 SPHARQ15513 63 aa8.27□□□□□ -1.08
CSDE1-217ENST00000534699 RNF144BQ7Z419 303 aa8.27□□□□□ -1.08
CSDE1-217ENST00000534699 TMEM219Q86XT9 240 aa8.27□□□□□ -1.08
CSDE1-217ENST00000534699 OR6M1Q8NGM8 313 aa8.27□□□□□ -1.08
CSDE1-217ENST00000534699 DUSP21Q9H596 190 aa8.27□□□□□ -1.08
CSDE1-217ENST00000534699 BLOC1S6Q9UL45 172 aa8.27□□□□□ -1.08
CSDE1-217ENST00000534699 HSF4Q9ULV5 492 aa8.27□□□□□ -1.08
CSDE1-217ENST00000534699 SIGLEC9Q9Y336 463 aa8.27□□□□□ -1.08
CSDE1-217ENST00000534699 IGHV1-3A0A0C4DH29 117 aa8.27□□□□□ -1.09
CSDE1-217ENST00000534699 CDRT1O95170 752 aa8.27□□□□□ -1.09
CSDE1-217ENST00000534699 SNRNP70P08621 437 aaKnown RBP8.27□□□□□ -1.09
CSDE1-217ENST00000534699 UCHL1P09936 223 aa8.27□□□□□ -1.09
CSDE1-217ENST00000534699 MGMTP16455 207 aa8.27□□□□□ -1.09
CSDE1-217ENST00000534699 CELP19835 753 aa8.27□□□□□ -1.09
CSDE1-217ENST00000534699 RBM48Q5RL73 367 aaKnown RBP8.27□□□□□ -1.09
CSDE1-217ENST00000534699 ATAD3CQ5T2N8 411 aa8.27□□□□□ -1.09
CSDE1-217ENST00000534699 RAB12Q6IQ22 244 aa8.27□□□□□ -1.09
CSDE1-217ENST00000534699 LAIR2Q6ISS4 152 aa8.27□□□□□ -1.09
CSDE1-217ENST00000534699 JAGN1Q8N5M9 183 aa8.27□□□□□ -1.09
CSDE1-217ENST00000534699 FAM110DQ8TAY7 271 aaPredicted RBP8.27□□□□□ -1.09
CSDE1-217ENST00000534699 NEK7Q8TDX7 302 aa8.27□□□□□ -1.09
CSDE1-217ENST00000534699 TAF15Q92804 592 aaKnown RBP eCLIP8.27□□□□□ -1.09
CSDE1-217ENST00000534699 UFD1Q92890 307 aa8.27□□□□□ -1.09
CSDE1-217ENST00000534699 MUL1Q969V5 352 aa8.27□□□□□ -1.09
CSDE1-217ENST00000534699 TRAPPC2LQ9UL33 140 aa8.27□□□□□ -1.09
CSDE1-217ENST00000534699 LSM2Q9Y333 95 aaKnown RBP8.27□□□□□ -1.09
CSDE1-217ENST00000534699 TCRBV4S1A1TA0A5B7 111 aa8.26□□□□□ -1.09
CSDE1-217ENST00000534699 AP4M1O00189 453 aa8.26□□□□□ -1.09
CSDE1-217ENST00000534699 PLXNB1O43157 2135 aa8.26□□□□□ -1.09
CSDE1-217ENST00000534699 MOSP00540 346 aa8.26□□□□□ -1.09
CSDE1-217ENST00000534699 AMY1AP04745 511 aa8.26□□□□□ -1.09
CSDE1-217ENST00000534699 AMY2AP04746 511 aa8.26□□□□□ -1.09
CSDE1-217ENST00000534699 ELANEP08246 267 aa8.26□□□□□ -1.09
CSDE1-217ENST00000534699 BLCAPP62952 87 aa8.26□□□□□ -1.09
CSDE1-217ENST00000534699 SLC22A6Q4U2R8 563 aa8.26□□□□□ -1.09
CSDE1-217ENST00000534699 ACSM3Q53FZ2 586 aa8.26□□□□□ -1.09
CSDE1-217ENST00000534699 ZNF880Q6PDB4 577 aa8.26□□□□□ -1.09
CSDE1-217ENST00000534699 AHSA2Q719I0 299 aa8.26□□□□□ -1.09
CSDE1-217ENST00000534699 NEDD4LQ96PU5 975 aa8.26□□□□□ -1.09
CSDE1-217ENST00000534699 OR14A2Q96R54 314 aa8.26□□□□□ -1.09
CSDE1-217ENST00000534699 URM1Q9BTM9 101 aaKnown RBP8.26□□□□□ -1.09
CSDE1-217ENST00000534699 ABRACLQ9P1F3 81 aa8.26□□□□□ -1.09
CSDE1-217ENST00000534699 TRAV8-7A0A075B6U6 113 aa8.26□□□□□ -1.09
CSDE1-217ENST00000534699 PSMB11A5LHX3 300 aa8.26□□□□□ -1.09
CSDE1-217ENST00000534699 SLC22A1O15245 554 aa8.26□□□□□ -1.09
CSDE1-217ENST00000534699 RBBP9O75884 186 aa8.26□□□□□ -1.09
CSDE1-217ENST00000534699 CALCBP10092 127 aa8.26□□□□□ -1.09
CSDE1-217ENST00000534699 RAB13P51153 203 aa8.26□□□□□ -1.09
CSDE1-217ENST00000534699 MLLT11Q13015 90 aaPredicted RBP8.26□□□□□ -1.09
CSDE1-217ENST00000534699 P2RY14Q15391 338 aa8.26□□□□□ -1.09
CSDE1-217ENST00000534699 HMGN3Q15651 99 aa8.26□□□□□ -1.09
CSDE1-217ENST00000534699 SSX1Q16384 188 aa8.26□□□□□ -1.09
CSDE1-217ENST00000534699 OR10K1Q8NGX5 313 aa8.26□□□□□ -1.09
CSDE1-217ENST00000534699 RTN4IP1Q8WWV3 396 aaPredicted RBP8.26□□□□□ -1.09
CSDE1-217ENST00000534699 CITED2Q99967 270 aaPredicted RBP8.26□□□□□ -1.09
CSDE1-217ENST00000534699 ANKRD60Q9BZ19 345 aa8.26□□□□□ -1.09
CSDE1-217ENST00000534699 PIN1P1O15428 100 aa8.26□□□□□ -1.09
CSDE1-217ENST00000534699 RPS27AP62979 156 aaKnown RBP8.26□□□□□ -1.09
CSDE1-217ENST00000534699 FOXE3Q13461 319 aa8.26□□□□□ -1.09
CSDE1-217ENST00000534699 ARL6IP1Q15041 203 aa8.26□□□□□ -1.09
CSDE1-217ENST00000534699 HSD17B12Q53GQ0 312 aa8.26□□□□□ -1.09
CSDE1-217ENST00000534699 PLA1AQ53H76 456 aa8.26□□□□□ -1.09
CSDE1-217ENST00000534699 PRSS48Q7RTY5 328 aa8.26□□□□□ -1.09
CSDE1-217ENST00000534699 LRRTM1Q86UE6 522 aa8.26□□□□□ -1.09
CSDE1-217ENST00000534699 DRAM1Q8N682 238 aa8.26□□□□□ -1.09
CSDE1-217ENST00000534699 BPIFB6Q8NFQ5 453 aa8.26□□□□□ -1.09
CSDE1-217ENST00000534699 OR5M11Q96RB7 305 aa8.26□□□□□ -1.09
CSDE1-217ENST00000534699 YTHDF1Q9BYJ9 559 aaKnown RBP8.26□□□□□ -1.09
CSDE1-217ENST00000534699 ABCG5Q9H222 651 aa8.26□□□□□ -1.09
CSDE1-217ENST00000534699 ACOT13Q9NPJ3 140 aa8.26□□□□□ -1.09
CSDE1-217ENST00000534699 PEX16Q9Y5Y5 336 aa8.26□□□□□ -1.09
CSDE1-217ENST00000534699 TMEM127O75204 238 aa8.25□□□□□ -1.09
CSDE1-217ENST00000534699 SRSF7Q16629 238 aaKnown RBP eCLIP8.25□□□□□ -1.09
CSDE1-217ENST00000534699 SLC35E3Q7Z769 313 aa8.25□□□□□ -1.09
CSDE1-217ENST00000534699 DPF1Q92782 380 aa8.25□□□□□ -1.09
CSDE1-217ENST00000534699 SELENOIQ9C0D9 397 aa8.25□□□□□ -1.09
CSDE1-217ENST00000534699 TOLLIPQ9H0E2 274 aa8.25□□□□□ -1.09
CSDE1-217ENST00000534699 GAB2Q9UQC2 676 aa8.25□□□□□ -1.09
CSDE1-217ENST00000534699 TMEM14DPA8MWL7 114 aa8.25□□□□□ -1.09
CSDE1-217ENST00000534699 C12orf77C9JDV5 145 aa8.25□□□□□ -1.09
CSDE1-217ENST00000534699 PDCD5O14737 125 aa8.25□□□□□ -1.09
CSDE1-217ENST00000534699 PF4V1P10720 104 aa8.25□□□□□ -1.09
CSDE1-217ENST00000534699 CPEP16870 476 aa8.25□□□□□ -1.09
CSDE1-217ENST00000534699 SRMP19623 302 aa8.25□□□□□ -1.09
CSDE1-217ENST00000534699 CD33P20138 364 aa8.25□□□□□ -1.09
CSDE1-217ENST00000534699 CHATP28329 748 aa8.25□□□□□ -1.09
CSDE1-217ENST00000534699 RPL23AP62750 156 aaKnown RBP8.25□□□□□ -1.09
CSDE1-217ENST00000534699 TAGLNQ01995 201 aaKnown RBP8.25□□□□□ -1.09
CSDE1-217ENST00000534699 ABCA11PQ4W5N1 156 aa8.25□□□□□ -1.09
CSDE1-217ENST00000534699 SYT6Q5T7P8 510 aaPredicted RBP8.25□□□□□ -1.09
CSDE1-217ENST00000534699 FAM89BQ8N5H3 189 aa8.25□□□□□ -1.09
CSDE1-217ENST00000534699 PHF21AQ96BD5 680 aa8.25□□□□□ -1.09
CSDE1-217ENST00000534699 R3HDM4Q96D70 268 aa8.25□□□□□ -1.09
CSDE1-217ENST00000534699 EAF1Q96JC9 268 aaPredicted RBP8.25□□□□□ -1.09
CSDE1-217ENST00000534699 PIPOXQ9P0Z9 390 aa8.25□□□□□ -1.09
CSDE1-217ENST00000534699 SLC17A2O00624 439 aa8.24□□□□□ -1.09
CSDE1-217ENST00000534699 RGS10O43665 173 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms