RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-223ENST00000534442 BTNL2Q9UIR0 455 aa3.02□□□□□ -1.93
ECHDC1-223ENST00000534442 HDGFL3Q9Y3E1 203 aa3.02□□□□□ -1.93
ECHDC1-223ENST00000534442 IGLV1-36A0A0B4J1U3 117 aa3.01□□□□□ -1.93
ECHDC1-223ENST00000534442 CCDC182A6NF36 153 aa3.01□□□□□ -1.93
ECHDC1-223ENST00000534442 PSTPIP1O43586 416 aa3.01□□□□□ -1.93
ECHDC1-223ENST00000534442 SUPT7LO94864 414 aa3.01□□□□□ -1.93
ECHDC1-223ENST00000534442 RAB36O95755 333 aa3.01□□□□□ -1.93
ECHDC1-223ENST00000534442 IGKV1D-16P01601 117 aa3.01□□□□□ -1.93
ECHDC1-223ENST00000534442 IFNA4P05014 189 aa3.01□□□□□ -1.93
ECHDC1-223ENST00000534442 SERPINA5P05154 406 aa3.01□□□□□ -1.93
ECHDC1-223ENST00000534442 ZNF43P17038 809 aa3.01□□□□□ -1.93
ECHDC1-223ENST00000534442 TBPP20226 339 aa3.01□□□□□ -1.93
ECHDC1-223ENST00000534442 ZBTB25P24278 435 aa3.01□□□□□ -1.93
ECHDC1-223ENST00000534442 PAX6P26367 422 aa3.01□□□□□ -1.93
ECHDC1-223ENST00000534442 FKBP2P26885 142 aaKnown RBP3.01□□□□□ -1.93
ECHDC1-223ENST00000534442 LCN1P31025 176 aa3.01□□□□□ -1.93
ECHDC1-223ENST00000534442 FUSP35637 526 aaKnown RBP eCLIP3.01□□□□□ -1.93
ECHDC1-223ENST00000534442 RGS6P49758 472 aa3.01□□□□□ -1.93
ECHDC1-223ENST00000534442 UBE2E1P51965 193 aa3.01□□□□□ -1.93
ECHDC1-223ENST00000534442 OR2B6P58173 313 aa3.01□□□□□ -1.93
ECHDC1-223ENST00000534442 SELENOTP62341 195 aa3.01□□□□□ -1.93
ECHDC1-223ENST00000534442 SLC35A1P78382 337 aa3.01□□□□□ -1.93
ECHDC1-223ENST00000534442 PRB3Q04118 309 aaPredicted RBP3.01□□□□□ -1.93
ECHDC1-223ENST00000534442 MERTKQ12866 999 aa3.01□□□□□ -1.93
ECHDC1-223ENST00000534442 QPRTQ15274 297 aa3.01□□□□□ -1.93
ECHDC1-223ENST00000534442 RCN1Q15293 331 aa3.01□□□□□ -1.93
ECHDC1-223ENST00000534442 C18orf21Q32NC0 220 aaPredicted RBP3.01□□□□□ -1.93
ECHDC1-223ENST00000534442 RNF212Q495C1 297 aa3.01□□□□□ -1.93
ECHDC1-223ENST00000534442 ATP6AP1LQ52LC2 224 aa3.01□□□□□ -1.93
ECHDC1-223ENST00000534442 CARD17Q5XLA6 110 aa3.01□□□□□ -1.93
ECHDC1-223ENST00000534442 IL34Q6ZMJ4 242 aa3.01□□□□□ -1.93
ECHDC1-223ENST00000534442 Q6ZN92 141 aa3.01□□□□□ -1.93
ECHDC1-223ENST00000534442 ZNF546Q86UE3 836 aa3.01□□□□□ -1.93
ECHDC1-223ENST00000534442 SPATA4Q8NEY3 305 aa3.01□□□□□ -1.93
ECHDC1-223ENST00000534442 OR9A2Q8NGT5 310 aa3.01□□□□□ -1.93
ECHDC1-223ENST00000534442 PLPPR1Q8TBJ4 325 aa3.01□□□□□ -1.93
ECHDC1-223ENST00000534442 PIFOQ8TCI5 191 aa3.01□□□□□ -1.93
ECHDC1-223ENST00000534442 MARC2Q969Z3 335 aa3.01□□□□□ -1.93
ECHDC1-223ENST00000534442 ANP32EQ9BTT0 268 aa3.01□□□□□ -1.93
ECHDC1-223ENST00000534442 KIFC1Q9BW19 673 aa3.01□□□□□ -1.93
ECHDC1-223ENST00000534442 FAM192AQ9GZU8 254 aa3.01□□□□□ -1.93
ECHDC1-223ENST00000534442 MFFQ9GZY8 342 aa3.01□□□□□ -1.93
ECHDC1-223ENST00000534442 OR51B6Q9H340 312 aa3.01□□□□□ -1.93
ECHDC1-223ENST00000534442 CHMP5Q9NZZ3 219 aa3.01□□□□□ -1.93
ECHDC1-223ENST00000534442 PSMC3IPQ9P2W1 217 aaPredicted RBP3.01□□□□□ -1.93
ECHDC1-223ENST00000534442 RABL2AQ9UBK7 228 aaPredicted RBP3.01□□□□□ -1.93
ECHDC1-223ENST00000534442 PITPNC1Q9UKF7 332 aa3.01□□□□□ -1.93
ECHDC1-223ENST00000534442 TRAPPC4Q9Y296 219 aa3.01□□□□□ -1.93
ECHDC1-223ENST00000534442 STARD10Q9Y365 291 aa3.01□□□□□ -1.93
ECHDC1-223ENST00000534442 PSMB11A5LHX3 300 aa3□□□□□ -1.93
ECHDC1-223ENST00000534442 ZNF99A8MXY4 864 aaPredicted RBP3□□□□□ -1.93
ECHDC1-223ENST00000534442 H3BNH8 94 aa3□□□□□ -1.93
ECHDC1-223ENST00000534442 PANO1I0J062 215 aa3□□□□□ -1.93
ECHDC1-223ENST00000534442 KLK1P06870 262 aa3□□□□□ -1.93
ECHDC1-223ENST00000534442 TROVE2P10155 538 aaKnown RBP eCLIP3□□□□□ -1.93
ECHDC1-223ENST00000534442 COX7A1P24310 79 aa3□□□□□ -1.93
ECHDC1-223ENST00000534442 IVDP26440 423 aa3□□□□□ -1.93
ECHDC1-223ENST00000534442 GABRA3P34903 492 aa3□□□□□ -1.93
ECHDC1-223ENST00000534442 BTCP35070 178 aa3□□□□□ -1.93
ECHDC1-223ENST00000534442 SLC1A2P43004 574 aa3□□□□□ -1.93
ECHDC1-223ENST00000534442 GLP1RP43220 463 aa3□□□□□ -1.93
ECHDC1-223ENST00000534442 YAP1P46937 504 aaKnown RBP3□□□□□ -1.93
ECHDC1-223ENST00000534442 CDKN2DP55273 166 aa3□□□□□ -1.93
ECHDC1-223ENST00000534442 DLX1P56177 255 aa3□□□□□ -1.93
ECHDC1-223ENST00000534442 PDIA2Q13087 525 aaKnown RBP3□□□□□ -1.93
ECHDC1-223ENST00000534442 PPP1R7Q15435 360 aa3□□□□□ -1.93
ECHDC1-223ENST00000534442 CEACAM16Q2WEN9 425 aa3□□□□□ -1.93
ECHDC1-223ENST00000534442 SASS6Q6UVJ0 657 aa3□□□□□ -1.93
ECHDC1-223ENST00000534442 LYPD2Q6UXB3 125 aa3□□□□□ -1.93
ECHDC1-223ENST00000534442 LINC00322Q6ZN03 302 aaPredicted RBP3□□□□□ -1.93
ECHDC1-223ENST00000534442 Q6ZSR3 168 aa3□□□□□ -1.93
ECHDC1-223ENST00000534442 H2AFVQ71UI9 128 aa3□□□□□ -1.93
ECHDC1-223ENST00000534442 PAGE2Q7Z2X7 111 aa3□□□□□ -1.93
ECHDC1-223ENST00000534442 ERI1Q8IV48 349 aaKnown RBP3□□□□□ -1.93
ECHDC1-223ENST00000534442 ZNF584Q8IVC4 421 aa3□□□□□ -1.93
ECHDC1-223ENST00000534442 ZNF695Q8IW36 515 aa3□□□□□ -1.93
ECHDC1-223ENST00000534442 PNKDQ8N490 385 aa3□□□□□ -1.93
ECHDC1-223ENST00000534442 RNF175Q8N4F7 328 aa3□□□□□ -1.93
ECHDC1-223ENST00000534442 FAM71E2Q8N5Q1 922 aa3□□□□□ -1.93
ECHDC1-223ENST00000534442 FNDC5Q8NAU1 212 aa3□□□□□ -1.93
ECHDC1-223ENST00000534442 OR8U1Q8NH10 309 aa3□□□□□ -1.93
ECHDC1-223ENST00000534442 OR5W2Q8NH69 310 aa3□□□□□ -1.93
ECHDC1-223ENST00000534442 C17orf50Q8WW18 174 aa3□□□□□ -1.93
ECHDC1-223ENST00000534442 OR8B4Q96RC9 309 aa3□□□□□ -1.93
ECHDC1-223ENST00000534442 TMEM59Q9BXS4 323 aa3□□□□□ -1.93
ECHDC1-223ENST00000534442 YTHDF1Q9BYJ9 559 aaKnown RBP3□□□□□ -1.93
ECHDC1-223ENST00000534442 POLR2J2Q9GZM3 115 aaKnown RBP3□□□□□ -1.93
ECHDC1-223ENST00000534442 POLR2J3Q9H1A7 115 aaKnown RBP3□□□□□ -1.93
ECHDC1-223ENST00000534442 TMED5Q9Y3A6 229 aa3□□□□□ -1.93
ECHDC1-223ENST00000534442 KIF25-AS1Q9Y6Z4 181 aa3□□□□□ -1.93
ECHDC1-223ENST00000534442 A0A087X0T9 212 aa2.99□□□□□ -1.93
ECHDC1-223ENST00000534442 FAM231BA6NCW3 169 aa2.99□□□□□ -1.93
ECHDC1-223ENST00000534442 VGLL3A8MV65 326 aa2.99□□□□□ -1.93
ECHDC1-223ENST00000534442 KRTAP4-16G5E9R7 235 aaPredicted RBP2.99□□□□□ -1.93
ECHDC1-223ENST00000534442 HDAC3O15379 428 aa2.99□□□□□ -1.93
ECHDC1-223ENST00000534442 SPOPO43791 374 aa2.99□□□□□ -1.93
ECHDC1-223ENST00000534442 EIF4E2O60573 245 aaKnown RBP2.99□□□□□ -1.93
ECHDC1-223ENST00000534442 WBP4O75554 376 aaKnown RBP2.99□□□□□ -1.93
ECHDC1-223ENST00000534442 STK16O75716 305 aa2.99□□□□□ -1.93
ECHDC1-223ENST00000534442 MMP23AO75900 390 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms