RNA–Protein interactions for RNA: ENST00000533643.1

COMMD9-208, Transcript of COMM domain containing 9, humanhuman

TSL 2

Gene COMMD9, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-208ENST00000533643 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.77□□□□□ -0.85
COMMD9-208ENST00000533643 IGKV1-6A0A0C4DH72 117 aa9.76□□□□□ -0.85
COMMD9-208ENST00000533643 J3QLI3 93 aa9.76□□□□□ -0.85
COMMD9-208ENST00000533643 F2RL2O00254 374 aa9.76□□□□□ -0.85
COMMD9-208ENST00000533643 FABP7O15540 132 aa9.76□□□□□ -0.85
COMMD9-208ENST00000533643 LANCL1O43813 399 aa9.76□□□□□ -0.85
COMMD9-208ENST00000533643 TOX4O94842 621 aa9.76□□□□□ -0.85
COMMD9-208ENST00000533643 SCTP09683 121 aa9.76□□□□□ -0.85
COMMD9-208ENST00000533643 GSTT2P0CG29 244 aa9.76□□□□□ -0.85
COMMD9-208ENST00000533643 GSTT2BP0CG30 244 aa9.76□□□□□ -0.85
COMMD9-208ENST00000533643 IGHV1-8P0DP01 117 aa9.76□□□□□ -0.85
COMMD9-208ENST00000533643 PRTN3P24158 256 aa9.76□□□□□ -0.85
COMMD9-208ENST00000533643 KIR2DS4P43632 304 aa9.76□□□□□ -0.85
COMMD9-208ENST00000533643 DLX1P56177 255 aa9.76□□□□□ -0.85
COMMD9-208ENST00000533643 ZNF45Q02386 682 aa9.76□□□□□ -0.85
COMMD9-208ENST00000533643 PRB3Q04118 309 aaPredicted RBP9.76□□□□□ -0.85
COMMD9-208ENST00000533643 LSAMPQ13449 338 aa9.76□□□□□ -0.85
COMMD9-208ENST00000533643 KIR2DS1Q14954 304 aa9.76□□□□□ -0.85
COMMD9-208ENST00000533643 METTL11BQ5VVY1 283 aa9.76□□□□□ -0.85
COMMD9-208ENST00000533643 LYSMD2Q8IV50 215 aa9.76□□□□□ -0.85
COMMD9-208ENST00000533643 PRR18Q8N4B5 295 aa9.76□□□□□ -0.85
COMMD9-208ENST00000533643 BEST4Q8NFU0 473 aa9.76□□□□□ -0.85
COMMD9-208ENST00000533643 S100ZQ8WXG8 99 aa9.76□□□□□ -0.85
COMMD9-208ENST00000533643 TBX15Q96SF7 602 aa9.76□□□□□ -0.85
COMMD9-208ENST00000533643 SMR3AQ99954 134 aa9.76□□□□□ -0.85
COMMD9-208ENST00000533643 TMPRSS13Q9BYE2 586 aa9.76□□□□□ -0.85
COMMD9-208ENST00000533643 SRRQ9GZT4 340 aa9.76□□□□□ -0.85
COMMD9-208ENST00000533643 C7orf69Q9H7B7 122 aa9.76□□□□□ -0.85
COMMD9-208ENST00000533643 METTL8Q9H825 291 aaKnown RBP9.76□□□□□ -0.85
COMMD9-208ENST00000533643 UNKLQ9H9P5 680 aaKnown RBP9.76□□□□□ -0.85
COMMD9-208ENST00000533643 ZNF286AQ9HBT8 521 aa9.76□□□□□ -0.85
COMMD9-208ENST00000533643 IFT46Q9NQC8 304 aa9.76□□□□□ -0.85
COMMD9-208ENST00000533643 KLK11Q9UBX7 282 aa9.76□□□□□ -0.85
COMMD9-208ENST00000533643 RBMX2Q9Y388 322 aaKnown RBP9.76□□□□□ -0.85
COMMD9-208ENST00000533643 AUP1Q9Y679 476 aa9.76□□□□□ -0.85
COMMD9-208ENST00000533643 SESN1Q9Y6P5 492 aa9.76□□□□□ -0.85
COMMD9-208ENST00000533643 DSCAML1Q8TD84 2053 aa9.76□□□□□ -0.85
COMMD9-208ENST00000533643 CSPG4Q6UVK1 2322 aa9.76□□□□□ -0.85
COMMD9-208ENST00000533643 ABCA1O95477 2261 aa9.75□□□□□ -0.85
COMMD9-208ENST00000533643 ANK3Q12955 4377 aaKnown RBP9.75□□□□□ -0.85
COMMD9-208ENST00000533643 hCG_1809904A0A1W2PP81 198 aa9.75□□□□□ -0.85
COMMD9-208ENST00000533643 A0A1W2PPE2 198 aa9.75□□□□□ -0.85
COMMD9-208ENST00000533643 A0A1W2PR64 198 aa9.75□□□□□ -0.85
COMMD9-208ENST00000533643 A0A1W2PRV1 198 aa9.75□□□□□ -0.85
COMMD9-208ENST00000533643 RBBP9O75884 186 aa9.75□□□□□ -0.85
COMMD9-208ENST00000533643 LY6G6DO95868 133 aa9.75□□□□□ -0.85
COMMD9-208ENST00000533643 AVPP01185 164 aa9.75□□□□□ -0.85
COMMD9-208ENST00000533643 FPR2P25090 351 aa9.75□□□□□ -0.85
COMMD9-208ENST00000533643 RCVRNP35243 200 aa9.75□□□□□ -0.85
COMMD9-208ENST00000533643 LOXL3P58215 753 aa9.75□□□□□ -0.85
COMMD9-208ENST00000533643 HERPUD1Q15011 391 aa9.75□□□□□ -0.85
COMMD9-208ENST00000533643 LTC4SQ16873 150 aa9.75□□□□□ -0.85
COMMD9-208ENST00000533643 IGSF11Q5DX21 431 aa9.75□□□□□ -0.85
COMMD9-208ENST00000533643 KIAA2026Q5HYC2 2103 aa9.75□□□□□ -0.85
COMMD9-208ENST00000533643 UTF1Q5T230 341 aa9.75□□□□□ -0.85
COMMD9-208ENST00000533643 OR52W1Q6IF63 320 aa9.75□□□□□ -0.85
COMMD9-208ENST00000533643 FAM53AQ6NSI3 398 aaPredicted RBP9.75□□□□□ -0.85
COMMD9-208ENST00000533643 ZNF782Q6ZMW2 699 aaPredicted RBP9.75□□□□□ -0.85
COMMD9-208ENST00000533643 C1orf229Q6ZS94 237 aaPredicted RBP9.75□□□□□ -0.85
COMMD9-208ENST00000533643 VMO1Q7Z5L0 202 aa9.75□□□□□ -0.85
COMMD9-208ENST00000533643 Q8N402 240 aa9.75□□□□□ -0.85
COMMD9-208ENST00000533643 OR10A7Q8NGE5 316 aa9.75□□□□□ -0.85
COMMD9-208ENST00000533643 OR4A4PQ8NGN8 299 aa9.75□□□□□ -0.85
COMMD9-208ENST00000533643 TNFRSF14Q92956 283 aa9.75□□□□□ -0.85
COMMD9-208ENST00000533643 KIRREL1Q96J84 757 aa9.75□□□□□ -0.85
COMMD9-208ENST00000533643 SDHCQ99643 169 aaPredicted RBP9.75□□□□□ -0.85
COMMD9-208ENST00000533643 SUCNR1Q9BXA5 334 aa9.75□□□□□ -0.85
COMMD9-208ENST00000533643 ANXA10Q9UJ72 324 aa9.75□□□□□ -0.85
COMMD9-208ENST00000533643 IGHV3-43A0A0B4J1X8 118 aa9.74□□□□□ -0.85
COMMD9-208ENST00000533643 IGHV3-43DP0DP04 118 aa9.74□□□□□ -0.85
COMMD9-208ENST00000533643 NFYBP25208 207 aa9.74□□□□□ -0.85
COMMD9-208ENST00000533643 HTD2P86397 168 aa9.74□□□□□ -0.85
COMMD9-208ENST00000533643 SSBP1Q04837 148 aaKnown RBP9.74□□□□□ -0.85
COMMD9-208ENST00000533643 HCP5Q6MZN7 132 aa9.74□□□□□ -0.85
COMMD9-208ENST00000533643 GDPD1Q8N9F7 314 aa9.74□□□□□ -0.85
COMMD9-208ENST00000533643 OR52L2PQ8NGH6 319 aa9.74□□□□□ -0.85
COMMD9-208ENST00000533643 OR52M1Q8NGK5 317 aa9.74□□□□□ -0.85
COMMD9-208ENST00000533643 IL1F10Q8WWZ1 152 aa9.74□□□□□ -0.85
COMMD9-208ENST00000533643 UPRTQ96BW1 309 aa9.74□□□□□ -0.85
COMMD9-208ENST00000533643 GALMQ96C23 342 aa9.74□□□□□ -0.85
COMMD9-208ENST00000533643 PCGF1Q9BSM1 259 aa9.74□□□□□ -0.85
COMMD9-208ENST00000533643 THAP7Q9BT49 309 aaPredicted RBP9.74□□□□□ -0.85
COMMD9-208ENST00000533643 CABLES2Q9BTV7 478 aa9.74□□□□□ -0.85
COMMD9-208ENST00000533643 TMEM133Q9H2Q1 129 aa9.74□□□□□ -0.85
COMMD9-208ENST00000533643 HEXA-AS1Q9H8Q6 139 aa9.74□□□□□ -0.85
COMMD9-208ENST00000533643 RAB9BQ9NP90 201 aa9.74□□□□□ -0.85
COMMD9-208ENST00000533643 SIRT7Q9NRC8 400 aa9.74□□□□□ -0.85
COMMD9-208ENST00000533643 YAE1D1Q9NRH1 226 aa9.74□□□□□ -0.85
COMMD9-208ENST00000533643 GFOD1Q9NXC2 390 aa9.74□□□□□ -0.85
COMMD9-208ENST00000533643 KCNS2Q9ULS6 477 aa9.74□□□□□ -0.85
COMMD9-208ENST00000533643 TLN2Q9Y4G6 2542 aa9.74□□□□□ -0.85
COMMD9-208ENST00000533643 TRBV6-7A0A0A0MS04 114 aa9.73□□□□□ -0.85
COMMD9-208ENST00000533643 FAM172BPA6NC97 362 aa9.73□□□□□ -0.85
COMMD9-208ENST00000533643 RNASEK-C17orf49H0YIS7 233 aa9.73□□□□□ -0.85
COMMD9-208ENST00000533643 SDCBPO00560 298 aaPredicted RBP9.73□□□□□ -0.85
COMMD9-208ENST00000533643 HOXB4P17483 251 aaPredicted RBP9.73□□□□□ -0.85
COMMD9-208ENST00000533643 HLA-DMAP28067 261 aa9.73□□□□□ -0.85
COMMD9-208ENST00000533643 CD34P28906 385 aa9.73□□□□□ -0.85
COMMD9-208ENST00000533643 PPP1CCP36873 323 aaKnown RBP9.73□□□□□ -0.85
COMMD9-208ENST00000533643 ACTBP60709 375 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms