RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 PXDC1Q5TGL8 231 aa15.45■□□□□ 0.06
SMPD1-208ENST00000533123 FAHD2BQ6P2I3 314 aaPredicted RBP15.45■□□□□ 0.06
SMPD1-208ENST00000533123 C11orf88Q6PI97 169 aa15.45■□□□□ 0.06
SMPD1-208ENST00000533123 FAHD2AQ96GK7 314 aa15.45■□□□□ 0.06
SMPD1-208ENST00000533123 DNAJB11Q9UBS4 358 aa15.45■□□□□ 0.06
SMPD1-208ENST00000533123 ARID1AO14497 2285 aa15.45■□□□□ 0.06
SMPD1-208ENST00000533123 TMEM178BH3BS89 294 aa15.45■□□□□ 0.06
SMPD1-208ENST00000533123 OVOL3O00110 214 aa15.45■□□□□ 0.06
SMPD1-208ENST00000533123 HAND1O96004 215 aa15.45■□□□□ 0.06
SMPD1-208ENST00000533123 NFYAP23511 347 aaPredicted RBP15.45■□□□□ 0.06
SMPD1-208ENST00000533123 HFEQ30201 348 aa15.45■□□□□ 0.06
SMPD1-208ENST00000533123 SPIN3Q5JUX0 258 aa15.45■□□□□ 0.06
SMPD1-208ENST00000533123 DHRS11Q6UWP2 260 aa15.45■□□□□ 0.06
SMPD1-208ENST00000533123 NEU4Q8WWR8 484 aaPredicted RBP15.45■□□□□ 0.06
SMPD1-208ENST00000533123 IGFBPL1Q8WX77 278 aa15.45■□□□□ 0.06
SMPD1-208ENST00000533123 RASL12Q9NYN1 266 aa15.45■□□□□ 0.06
SMPD1-208ENST00000533123 PRR13Q9NZ81 148 aa15.45■□□□□ 0.06
SMPD1-208ENST00000533123 RFPL4AA6NLU0 287 aa15.44■□□□□ 0.06
SMPD1-208ENST00000533123 RFPL4AL1F8VTS6 287 aa15.44■□□□□ 0.06
SMPD1-208ENST00000533123 OR2A4O95047 310 aa15.44■□□□□ 0.06
SMPD1-208ENST00000533123 KNG1P01042 644 aa15.44■□□□□ 0.06
SMPD1-208ENST00000533123 GIPP09681 153 aaPredicted RBP15.44■□□□□ 0.06
SMPD1-208ENST00000533123 TAS2R31P59538 309 aa15.44■□□□□ 0.06
SMPD1-208ENST00000533123 FXYD4P59646 89 aa15.44■□□□□ 0.06
SMPD1-208ENST00000533123 KRTAP10-9P60411 292 aa15.44■□□□□ 0.06
SMPD1-208ENST00000533123 ATXN7L3Q14CW9 347 aaPredicted RBP15.44■□□□□ 0.06
SMPD1-208ENST00000533123 ZNF787Q6DD87 383 aa15.44■□□□□ 0.06
SMPD1-208ENST00000533123 DEFB108BQ8NET1 73 aa15.44■□□□□ 0.06
SMPD1-208ENST00000533123 TMEM185AQ8NFB2 350 aa15.44■□□□□ 0.06
SMPD1-208ENST00000533123 PLPPR1Q8TBJ4 325 aa15.44■□□□□ 0.06
SMPD1-208ENST00000533123 TOMM40LQ969M1 308 aa15.44■□□□□ 0.06
SMPD1-208ENST00000533123 OR2A7Q96R45 310 aa15.44■□□□□ 0.06
SMPD1-208ENST00000533123 GSX2Q9BZM3 304 aa15.44■□□□□ 0.06
SMPD1-208ENST00000533123 ASH1LQ9NR48 2969 aaKnown RBP15.44■□□□□ 0.06
SMPD1-208ENST00000533123 HECTD1Q9ULT8 2610 aa15.44■□□□□ 0.06
SMPD1-208ENST00000533123 TRAV39A0A0B4J263 110 aa15.44■□□□□ 0.06
SMPD1-208ENST00000533123 SH2D1BO14796 132 aa15.44■□□□□ 0.06
SMPD1-208ENST00000533123 DAOP14920 347 aa15.44■□□□□ 0.06
SMPD1-208ENST00000533123 RCC1P18754 421 aaPredicted RBP15.44■□□□□ 0.06
SMPD1-208ENST00000533123 SUPT4H1P63272 117 aaKnown RBP15.44■□□□□ 0.06
SMPD1-208ENST00000533123 RBM39Q14498 530 aaKnown RBP15.44■□□□□ 0.06
SMPD1-208ENST00000533123 HERPUD1Q15011 391 aa15.44■□□□□ 0.06
SMPD1-208ENST00000533123 TMEM128Q5BJH2 165 aa15.44■□□□□ 0.06
SMPD1-208ENST00000533123 LY6G6FQ5SQ64 297 aa15.44■□□□□ 0.06
SMPD1-208ENST00000533123 Q6ZS49 121 aa15.44■□□□□ 0.06
SMPD1-208ENST00000533123 MITD1Q8WV92 249 aa15.44■□□□□ 0.06
SMPD1-208ENST00000533123 SCGB3A2Q96PL1 93 aa15.44■□□□□ 0.06
SMPD1-208ENST00000533123 FXYD6Q9H0Q3 95 aa15.44■□□□□ 0.06
SMPD1-208ENST00000533123 MAB21L2Q9Y586 359 aa15.44■□□□□ 0.06
SMPD1-208ENST00000533123 TANC2Q9HCD6 1990 aa15.44■□□□□ 0.06
SMPD1-208ENST00000533123 APCP25054 2843 aa15.43■□□□□ 0.06
SMPD1-208ENST00000533123 CCSO14618 274 aa15.43■□□□□ 0.06
SMPD1-208ENST00000533123 PSPNO60542 156 aa15.43■□□□□ 0.06
SMPD1-208ENST00000533123 RAB14P61106 215 aa15.43■□□□□ 0.06
SMPD1-208ENST00000533123 SLC9A3R2Q15599 337 aa15.43■□□□□ 0.06
SMPD1-208ENST00000533123 FIP1L1Q6UN15 594 aaKnown RBP15.43■□□□□ 0.06
SMPD1-208ENST00000533123 C1orf87Q8N0U7 546 aa15.43■□□□□ 0.06
SMPD1-208ENST00000533123 GLAP06280 429 aa15.43■□□□□ 0.06
SMPD1-208ENST00000533123 PSG2P11465 335 aa15.43■□□□□ 0.06
SMPD1-208ENST00000533123 DHODHQ02127 395 aa15.43■□□□□ 0.06
SMPD1-208ENST00000533123 SURF2Q15527 256 aaPredicted RBP15.43■□□□□ 0.06
SMPD1-208ENST00000533123 OPN4Q9UHM6 478 aa15.43■□□□□ 0.06
SMPD1-208ENST00000533123 WIPI2Q9Y4P8 454 aa15.43■□□□□ 0.06
SMPD1-208ENST00000533123 IGKV1-6A0A0C4DH72 117 aa15.42■□□□□ 0.06
SMPD1-208ENST00000533123 TRDCB7Z8K6 153 aa15.42■□□□□ 0.06
SMPD1-208ENST00000533123 BET1O15155 118 aa15.42■□□□□ 0.06
SMPD1-208ENST00000533123 F12P00748 615 aaPredicted RBP15.42■□□□□ 0.06
SMPD1-208ENST00000533123 RPS2P15880 293 aaKnown RBP15.42■□□□□ 0.06
SMPD1-208ENST00000533123 SRSF7Q16629 238 aaKnown RBP eCLIP15.42■□□□□ 0.06
SMPD1-208ENST00000533123 KCTD9Q7L273 389 aa15.42■□□□□ 0.06
SMPD1-208ENST00000533123 PHB2Q99623 299 aa15.42■□□□□ 0.06
SMPD1-208ENST00000533123 RIMS4Q9H426 269 aaPredicted RBP15.42■□□□□ 0.06
SMPD1-208ENST00000533123 C14orf166Q9Y224 244 aaKnown RBP15.42■□□□□ 0.06
SMPD1-208ENST00000533123 IGKV1D-17A0A075B6S4 117 aa15.41■□□□□ 0.06
SMPD1-208ENST00000533123 OOEPA6NGQ2 149 aa15.41■□□□□ 0.06
SMPD1-208ENST00000533123 DUS4LO95620 317 aaKnown RBP15.41■□□□□ 0.06
SMPD1-208ENST00000533123 AADACP22760 399 aa15.41■□□□□ 0.06
SMPD1-208ENST00000533123 GLP1RP43220 463 aa15.41■□□□□ 0.06
SMPD1-208ENST00000533123 RAP2BP61225 183 aa15.41■□□□□ 0.06
SMPD1-208ENST00000533123 SEC61A1P61619 476 aaKnown RBP15.41■□□□□ 0.06
SMPD1-208ENST00000533123 FAM90A1Q86YD7 464 aa15.41■□□□□ 0.06
SMPD1-208ENST00000533123 CD177Q8N6Q3 437 aa15.41■□□□□ 0.06
SMPD1-208ENST00000533123 RBPMSQ93062 196 aaKnown RBP15.41■□□□□ 0.06
SMPD1-208ENST00000533123 MAP1AP78559 2803 aaPredicted RBP15.41■□□□□ 0.06
SMPD1-208ENST00000533123 VPS13CQ709C8 3753 aa15.41■□□□□ 0.06
SMPD1-208ENST00000533123 PPIAL4EA0A075B759 164 aa15.41■□□□□ 0.06
SMPD1-208ENST00000533123 PPIAL4DF5H284 164 aa15.41■□□□□ 0.06
SMPD1-208ENST00000533123 RP2O75695 350 aa15.41■□□□□ 0.06
SMPD1-208ENST00000533123 SFT2D2O95562 160 aa15.41■□□□□ 0.06
SMPD1-208ENST00000533123 PPIAL4FP0DN26 164 aa15.41■□□□□ 0.06
SMPD1-208ENST00000533123 GABRA2P47869 451 aa15.41■□□□□ 0.06
SMPD1-208ENST00000533123 EFNA4P52798 201 aa15.41■□□□□ 0.06
SMPD1-208ENST00000533123 ZNF497Q6ZNH5 498 aa15.41■□□□□ 0.06
SMPD1-208ENST00000533123 OR5M8Q8NGP6 311 aa15.41■□□□□ 0.06
SMPD1-208ENST00000533123 GLS2Q9UI32 602 aa15.41■□□□□ 0.06
SMPD1-208ENST00000533123 METRNQ9UJH8 293 aa15.41■□□□□ 0.06
SMPD1-208ENST00000533123 PPIAL4AQ9Y536 164 aa15.41■□□□□ 0.06
SMPD1-208ENST00000533123 TRBV6-6A0A0A6YYG2 114 aa15.4■□□□□ 0.06
SMPD1-208ENST00000533123 KIR2DS1A0A191URI9 304 aa15.4■□□□□ 0.06
SMPD1-208ENST00000533123 TRIM77I1YAP6 450 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms