RNA–Protein interactions for RNA: ENST00000532751.1

PTPRK-222, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 4

Gene PTPRK, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-222ENST00000532751 A0A0A6YYD4 124 aa17.73■□□□□ 0.43
PTPRK-222ENST00000532751 TMEM272A0A1B0GTI8 110 aa17.73■□□□□ 0.43
PTPRK-222ENST00000532751 C12orf77C9JDV5 145 aa17.73■□□□□ 0.43
PTPRK-222ENST00000532751 BUB1B-PAK6H3BSN5 160 aa17.73■□□□□ 0.43
PTPRK-222ENST00000532751 SDCBPO00560 298 aaPredicted RBP17.73■□□□□ 0.43
PTPRK-222ENST00000532751 GADD45AP24522 165 aa17.73■□□□□ 0.43
PTPRK-222ENST00000532751 VEGFCP49767 419 aa17.73■□□□□ 0.43
PTPRK-222ENST00000532751 DYNLT3P51808 116 aa17.73■□□□□ 0.43
PTPRK-222ENST00000532751 TMEM30BQ3MIR4 351 aa17.73■□□□□ 0.43
PTPRK-222ENST00000532751 TIMM50Q3ZCQ8 353 aa17.73■□□□□ 0.43
PTPRK-222ENST00000532751 ZNF554Q86TJ5 538 aa17.73■□□□□ 0.43
PTPRK-222ENST00000532751 MRPL30Q8TCC3 161 aaKnown RBP17.73■□□□□ 0.43
PTPRK-222ENST00000532751 LEAP2Q969E1 77 aa17.73■□□□□ 0.43
PTPRK-222ENST00000532751 PITPNC1Q9UKF7 332 aa17.73■□□□□ 0.43
PTPRK-222ENST00000532751 PSG11Q9UQ72 335 aa17.73■□□□□ 0.43
PTPRK-222ENST00000532751 LOC100506127A0A0U1RQW1 187 aa17.72■□□□□ 0.43
PTPRK-222ENST00000532751 POM121CA8CG34 1229 aa17.72■□□□□ 0.43
PTPRK-222ENST00000532751 NOTOA8MTQ0 251 aa17.72■□□□□ 0.43
PTPRK-222ENST00000532751 F2RL2O00254 374 aa17.72■□□□□ 0.43
PTPRK-222ENST00000532751 LDLRAD4O15165 306 aa17.72■□□□□ 0.43
PTPRK-222ENST00000532751 SOCS1O15524 211 aa17.72■□□□□ 0.43
PTPRK-222ENST00000532751 IGHV3-7P01780 117 aa17.72■□□□□ 0.43
PTPRK-222ENST00000532751 MDKP21741 143 aaPredicted RBP17.72■□□□□ 0.43
PTPRK-222ENST00000532751 GNG10P50151 68 aa17.72■□□□□ 0.43
PTPRK-222ENST00000532751 CCDC144NLQ6NUI1 221 aa17.72■□□□□ 0.43
PTPRK-222ENST00000532751 Q6ZTK2 550 aa17.72■□□□□ 0.43
PTPRK-222ENST00000532751 PRR18Q8N4B5 295 aa17.72■□□□□ 0.43
PTPRK-222ENST00000532751 UBALD1Q8TB05 177 aa17.72■□□□□ 0.43
PTPRK-222ENST00000532751 PIFOQ8TCI5 191 aa17.72■□□□□ 0.43
PTPRK-222ENST00000532751 LIN7BQ9HAP6 207 aa17.72■□□□□ 0.43
PTPRK-222ENST00000532751 CHMP1AQ9HD42 196 aaPredicted RBP17.72■□□□□ 0.43
PTPRK-222ENST00000532751 MBNL3Q9NUK0 354 aaKnown RBP17.72■□□□□ 0.43
PTPRK-222ENST00000532751 GFOD1Q9NXC2 390 aa17.72■□□□□ 0.43
PTPRK-222ENST00000532751 HSF4Q9ULV5 492 aa17.72■□□□□ 0.43
PTPRK-222ENST00000532751 TCF19Q9Y242 345 aa17.72■□□□□ 0.43
PTPRK-222ENST00000532751 MMP24Q9Y5R2 645 aa17.72■□□□□ 0.43
PTPRK-222ENST00000532751 OOSP1A8MZH6 123 aa17.71■□□□□ 0.43
PTPRK-222ENST00000532751 HAX1O00165 279 aa17.71■□□□□ 0.43
PTPRK-222ENST00000532751 HBZP02008 142 aa17.71■□□□□ 0.43
PTPRK-222ENST00000532751 RCC1P18754 421 aaPredicted RBP17.71■□□□□ 0.43
PTPRK-222ENST00000532751 BRS3P32247 399 aa17.71■□□□□ 0.43
PTPRK-222ENST00000532751 RAB13P51153 203 aa17.71■□□□□ 0.43
PTPRK-222ENST00000532751 RELBQ01201 579 aa17.71■□□□□ 0.43
PTPRK-222ENST00000532751 UTF1Q5T230 341 aa17.71■□□□□ 0.43
PTPRK-222ENST00000532751 TPTE2P1Q5T6R2 138 aa17.71■□□□□ 0.43
PTPRK-222ENST00000532751 OR10X1Q8NGY0 326 aa17.71■□□□□ 0.43
PTPRK-222ENST00000532751 RPEQ96AT9 228 aa17.71■□□□□ 0.43
PTPRK-222ENST00000532751 RIMS4Q9H426 269 aaPredicted RBP17.71■□□□□ 0.43
PTPRK-222ENST00000532751 TAF9BQ9HBM6 251 aa17.71■□□□□ 0.43
PTPRK-222ENST00000532751 IGHV3-43A0A0B4J1X8 118 aa17.7■□□□□ 0.42
PTPRK-222ENST00000532751 SMIM30A4D0T7 59 aa17.7■□□□□ 0.42
PTPRK-222ENST00000532751 IGHV3-43DP0DP04 118 aa17.7■□□□□ 0.42
PTPRK-222ENST00000532751 RAB6AP20340 208 aa17.7■□□□□ 0.42
PTPRK-222ENST00000532751 MNDAP41218 407 aa17.7■□□□□ 0.42
PTPRK-222ENST00000532751 Q3ZCU0 254 aa17.7■□□□□ 0.42
PTPRK-222ENST00000532751 CYYR1Q96J86 154 aa17.7■□□□□ 0.42
PTPRK-222ENST00000532751 GNG12Q9UBI6 72 aa17.7■□□□□ 0.42
PTPRK-222ENST00000532751 CLPSL1A2RUU4 121 aa17.69■□□□□ 0.42
PTPRK-222ENST00000532751 METTL21EPA6NDL7 271 aa17.69■□□□□ 0.42
PTPRK-222ENST00000532751 FOXI3A8MTJ6 420 aaPredicted RBP17.69■□□□□ 0.42
PTPRK-222ENST00000532751 SDC2P34741 201 aa17.69■□□□□ 0.42
PTPRK-222ENST00000532751 LOXL3P58215 753 aa17.69■□□□□ 0.42
PTPRK-222ENST00000532751 MADCAM1Q13477 382 aa17.69■□□□□ 0.42
PTPRK-222ENST00000532751 OLFML2AQ68BL7 652 aa17.69■□□□□ 0.42
PTPRK-222ENST00000532751 Q6ZSV7 163 aa17.69■□□□□ 0.42
PTPRK-222ENST00000532751 MOB1BQ7L9L4 216 aa17.69■□□□□ 0.42
PTPRK-222ENST00000532751 NR2C2APQ86WQ0 139 aa17.69■□□□□ 0.42
PTPRK-222ENST00000532751 OR1L1Q8NH94 360 aa17.69■□□□□ 0.42
PTPRK-222ENST00000532751 TOMM40LQ969M1 308 aa17.69■□□□□ 0.42
PTPRK-222ENST00000532751 PTX4Q96A99 478 aa17.69■□□□□ 0.42
PTPRK-222ENST00000532751 ARHGAP5-AS1Q96IT6 56 aa17.69■□□□□ 0.42
PTPRK-222ENST00000532751 A6NDX4 124 aa17.68■□□□□ 0.42
PTPRK-222ENST00000532751 LY6LH3BQJ8 138 aa17.68■□□□□ 0.42
PTPRK-222ENST00000532751 TSPAN9O75954 239 aa17.68■□□□□ 0.42
PTPRK-222ENST00000532751 NAPSAO96009 420 aa17.68■□□□□ 0.42
PTPRK-222ENST00000532751 SLC2A2P11168 524 aaPredicted RBP17.68■□□□□ 0.42
PTPRK-222ENST00000532751 JUNBP17275 347 aaPredicted RBP17.68■□□□□ 0.42
PTPRK-222ENST00000532751 TMEM50BP56557 158 aa17.68■□□□□ 0.42
PTPRK-222ENST00000532751 MXD1Q05195 221 aa17.68■□□□□ 0.42
PTPRK-222ENST00000532751 SFXN4Q6P4A7 337 aa17.68■□□□□ 0.42
PTPRK-222ENST00000532751 LINC00311Q8N616 119 aa17.68■□□□□ 0.42
PTPRK-222ENST00000532751 C8orf31Q8N9H6 132 aa17.68■□□□□ 0.42
PTPRK-222ENST00000532751 DTX3Q8N9I9 347 aa17.68■□□□□ 0.42
PTPRK-222ENST00000532751 SETD6Q8TBK2 473 aa17.68■□□□□ 0.42
PTPRK-222ENST00000532751 CENPOQ9BU64 300 aa17.68■□□□□ 0.42
PTPRK-222ENST00000532751 ZNF747Q9BV97 191 aa17.68■□□□□ 0.42
PTPRK-222ENST00000532751 PECRQ9BY49 303 aa17.68■□□□□ 0.42
PTPRK-222ENST00000532751 ABRACLQ9P1F3 81 aa17.68■□□□□ 0.42
PTPRK-222ENST00000532751 AK3Q9UIJ7 227 aa17.68■□□□□ 0.42
PTPRK-222ENST00000532751 DAPK2Q9UIK4 370 aa17.68■□□□□ 0.42
PTPRK-222ENST00000532751 A0A0B4J203 849 aa17.67■□□□□ 0.42
PTPRK-222ENST00000532751 A0A1W2PPE3 182 aa17.67■□□□□ 0.42
PTPRK-222ENST00000532751 TRIM64CA6NLI5 447 aa17.67■□□□□ 0.42
PTPRK-222ENST00000532751 IL3RAP26951 378 aa17.67■□□□□ 0.42
PTPRK-222ENST00000532751 RAB7AP51149 207 aa17.67■□□□□ 0.42
PTPRK-222ENST00000532751 MRPS15P82914 257 aaKnown RBP17.67■□□□□ 0.42
PTPRK-222ENST00000532751 PLA2G7Q13093 441 aa17.67■□□□□ 0.42
PTPRK-222ENST00000532751 HMGN3Q15651 99 aa17.67■□□□□ 0.42
PTPRK-222ENST00000532751 OR4C13Q8NGP0 309 aa17.67■□□□□ 0.42
PTPRK-222ENST00000532751 GALMQ96C23 342 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms