RNA–Protein interactions for RNA: ENST00000532737.1

USP48-214, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 680 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-214ENST00000532737 MFNGO00587 321 aa20.14■□□□□ 0.81
USP48-214ENST00000532737 MELTFP08582 738 aa20.14■□□□□ 0.81
USP48-214ENST00000532737 FBP1P09467 338 aa20.14■□□□□ 0.81
USP48-214ENST00000532737 HIST1H1DP16402 221 aaKnown RBP20.14■□□□□ 0.81
USP48-214ENST00000532737 GNB3P16520 340 aa20.14■□□□□ 0.81
USP48-214ENST00000532737 LGALS4P56470 323 aa20.14■□□□□ 0.81
USP48-214ENST00000532737 FAM53AQ6NSI3 398 aaPredicted RBP20.14■□□□□ 0.81
USP48-214ENST00000532737 ZNF880Q6PDB4 577 aa20.14■□□□□ 0.81
USP48-214ENST00000532737 OR1L1Q8NH94 360 aa20.14■□□□□ 0.81
USP48-214ENST00000532737 LEAP2Q969E1 77 aa20.14■□□□□ 0.81
USP48-214ENST00000532737 SPATA2Q9UM82 520 aa20.14■□□□□ 0.81
USP48-214ENST00000532737 A0A075B6Q4 140 aa20.13■□□□□ 0.81
USP48-214ENST00000532737 TRBV6-6A0A0A6YYG2 114 aa20.13■□□□□ 0.81
USP48-214ENST00000532737 F2RL2O00254 374 aa20.13■□□□□ 0.81
USP48-214ENST00000532737 IGHV3-7P01780 117 aa20.13■□□□□ 0.81
USP48-214ENST00000532737 HBZP02008 142 aa20.13■□□□□ 0.81
USP48-214ENST00000532737 PAX6P26367 422 aa20.13■□□□□ 0.81
USP48-214ENST00000532737 TRAT1Q6PIZ9 186 aa20.13■□□□□ 0.81
USP48-214ENST00000532737 DUX5Q96PT3 197 aa20.13■□□□□ 0.81
USP48-214ENST00000532737 JMJD8Q96S16 334 aa20.13■□□□□ 0.81
USP48-214ENST00000532737 CMSS1Q9BQ75 279 aaKnown RBP20.13■□□□□ 0.81
USP48-214ENST00000532737 RIMS4Q9H426 269 aaPredicted RBP20.13■□□□□ 0.81
USP48-214ENST00000532737 KCNIP1Q9NZI2 227 aa20.13■□□□□ 0.81
USP48-214ENST00000532737 DNAJC9-AS1A6NH13 148 aa20.12■□□□□ 0.81
USP48-214ENST00000532737 SPINT2O43291 252 aa20.12■□□□□ 0.81
USP48-214ENST00000532737 HOXA3O43365 443 aaPredicted RBP20.12■□□□□ 0.81
USP48-214ENST00000532737 IGLV1-47P01700 117 aa20.12■□□□□ 0.81
USP48-214ENST00000532737 LOXL3P58215 753 aa20.12■□□□□ 0.81
USP48-214ENST00000532737 SLC9A3R2Q15599 337 aa20.12■□□□□ 0.81
USP48-214ENST00000532737 LDLRAD3Q86YD5 345 aa20.12■□□□□ 0.81
USP48-214ENST00000532737 PRR18Q8N4B5 295 aa20.12■□□□□ 0.81
USP48-214ENST00000532737 OR4P4Q8NGL7 312 aa20.12■□□□□ 0.81
USP48-214ENST00000532737 SETD6Q8TBK2 473 aa20.12■□□□□ 0.81
USP48-214ENST00000532737 C12orf4Q9NQ89 552 aa20.12■□□□□ 0.81
USP48-214ENST00000532737 ZNRD1Q9P1U0 126 aa20.12■□□□□ 0.81
USP48-214ENST00000532737 TBL2Q9Y4P3 447 aaKnown RBP20.12■□□□□ 0.81
USP48-214ENST00000532737 IGHV3-43A0A0B4J1X8 118 aa20.11■□□□□ 0.81
USP48-214ENST00000532737 SDCBPO00560 298 aaPredicted RBP20.11■□□□□ 0.81
USP48-214ENST00000532737 IGHV3-43DP0DP04 118 aa20.11■□□□□ 0.81
USP48-214ENST00000532737 TMBIM6P55061 237 aa20.11■□□□□ 0.81
USP48-214ENST00000532737 SPCS2Q15005 226 aa20.11■□□□□ 0.81
USP48-214ENST00000532737 HMGN3Q15651 99 aa20.11■□□□□ 0.81
USP48-214ENST00000532737 CDNFQ49AH0 187 aa20.11■□□□□ 0.81
USP48-214ENST00000532737 ZNF554Q86TJ5 538 aa20.11■□□□□ 0.81
USP48-214ENST00000532737 DYNAPQ8N1N2 210 aa20.11■□□□□ 0.81
USP48-214ENST00000532737 BEND2Q8NDZ0 799 aa20.11■□□□□ 0.81
USP48-214ENST00000532737 OR52M1Q8NGK5 317 aa20.11■□□□□ 0.81
USP48-214ENST00000532737 RAB2BQ8WUD1 216 aa20.11■□□□□ 0.81
USP48-214ENST00000532737 KCTD12Q96CX2 325 aaKnown RBP20.11■□□□□ 0.81
USP48-214ENST00000532737 GFOD1Q9NXC2 390 aa20.11■□□□□ 0.81
USP48-214ENST00000532737 ELF5Q9UKW6 265 aaPredicted RBP20.11■□□□□ 0.81
USP48-214ENST00000532737 PSG11Q9UQ72 335 aa20.11■□□□□ 0.81
USP48-214ENST00000532737 TOR1AO14656 332 aa20.1■□□□□ 0.81
USP48-214ENST00000532737 CD3GP09693 182 aa20.1■□□□□ 0.81
USP48-214ENST00000532737 RORCP51449 518 aa20.1■□□□□ 0.81
USP48-214ENST00000532737 UBA52P62987 128 aaKnown RBP20.1■□□□□ 0.81
USP48-214ENST00000532737 OR9G1Q8NH87 305 aa20.1■□□□□ 0.81
USP48-214ENST00000532737 ZNF596Q8TC21 504 aa20.1■□□□□ 0.81
USP48-214ENST00000532737 MEGF9Q9H1U4 602 aa20.1■□□□□ 0.81
USP48-214ENST00000532737 Q9N2K0 584 aa20.1■□□□□ 0.81
USP48-214ENST00000532737 RAB9BQ9NP90 201 aa20.1■□□□□ 0.81
USP48-214ENST00000532737 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP20.1■□□□□ 0.81
USP48-214ENST00000532737 SERPINE3A8MV23 424 aa20.09■□□□□ 0.81
USP48-214ENST00000532737 SCGNO76038 276 aa20.09■□□□□ 0.81
USP48-214ENST00000532737 IGHV4-59P01825 116 aa20.09■□□□□ 0.81
USP48-214ENST00000532737 HTR1DP28221 377 aa20.09■□□□□ 0.81
USP48-214ENST00000532737 IER3P46695 156 aa20.09■□□□□ 0.81
USP48-214ENST00000532737 PRRX1P54821 245 aa20.09■□□□□ 0.81
USP48-214ENST00000532737 HLA-DRB5Q30154 266 aa20.09■□□□□ 0.81
USP48-214ENST00000532737 KRTAP24-1Q3LI83 254 aa20.09■□□□□ 0.81
USP48-214ENST00000532737 MINOS1Q5TGZ0 78 aa20.09■□□□□ 0.81
USP48-214ENST00000532737 MOB1BQ7L9L4 216 aa20.09■□□□□ 0.81
USP48-214ENST00000532737 SAMD12Q8N8I0 201 aa20.09■□□□□ 0.81
USP48-214ENST00000532737 MALSU1Q96EH3 234 aa20.09■□□□□ 0.81
USP48-214ENST00000532737 BCL7BQ9BQE9 202 aa20.09■□□□□ 0.81
USP48-214ENST00000532737 TNFRSF19Q9NS68 423 aa20.09■□□□□ 0.81
USP48-214ENST00000532737 MINOS1-NBL1R4GNA1 71 aa20.09■□□□□ 0.81
USP48-214ENST00000532737 CLDN34H7C241 214 aa20.08■□□□□ 0.81
USP48-214ENST00000532737 J3QR06 171 aa20.08■□□□□ 0.81
USP48-214ENST00000532737 GNG10P50151 68 aa20.08■□□□□ 0.81
USP48-214ENST00000532737 ARL6IP1Q15041 203 aa20.08■□□□□ 0.81
USP48-214ENST00000532737 SSX2Q16385 188 aa20.08■□□□□ 0.81
USP48-214ENST00000532737 OR52L2PQ8NGH6 319 aa20.08■□□□□ 0.81
USP48-214ENST00000532737 SSMEM1Q8WWF3 244 aa20.08■□□□□ 0.81
USP48-214ENST00000532737 ABCG5Q9H222 651 aa20.08■□□□□ 0.81
USP48-214ENST00000532737 DPM3Q9P2X0 92 aa20.08■□□□□ 0.81
USP48-214ENST00000532737 CEPT1Q9Y6K0 416 aa20.08■□□□□ 0.81
USP48-214ENST00000532737 NBEAL1Q6ZS30 2694 aa20.08■□□□□ 0.8
USP48-214ENST00000532737 TRAV18A0A075B6X5 111 aa20.07■□□□□ 0.8
USP48-214ENST00000532737 A0A1W2PPE3 182 aa20.07■□□□□ 0.8
USP48-214ENST00000532737 POM121CA8CG34 1229 aa20.07■□□□□ 0.8
USP48-214ENST00000532737 TRIM77I1YAP6 450 aa20.07■□□□□ 0.8
USP48-214ENST00000532737 MRPS15P82914 257 aaKnown RBP20.07■□□□□ 0.8
USP48-214ENST00000532737 ARFRP1Q13795 201 aa20.07■□□□□ 0.8
USP48-214ENST00000532737 TMEM30BQ3MIR4 351 aa20.07■□□□□ 0.8
USP48-214ENST00000532737 ZNF260Q3ZCT1 412 aa20.07■□□□□ 0.8
USP48-214ENST00000532737 OR10V1Q8NGI7 309 aa20.07■□□□□ 0.8
USP48-214ENST00000532737 PHF21AQ96BD5 680 aa20.07■□□□□ 0.8
USP48-214ENST00000532737 ISOC1Q96CN7 298 aa20.07■□□□□ 0.8
USP48-214ENST00000532737 MMP28Q9H239 520 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms