RNA–Protein interactions for RNA: ENST00000532700.6

SMG1-203, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-203ENST00000532700 FAM90A13PP0C7W8 464 aa14.16□□□□□ -0.14
SMG1-203ENST00000532700 FAM90A14PP0C7W9 464 aa14.16□□□□□ -0.14
SMG1-203ENST00000532700 FAM90A24PP0C7X0 464 aa14.16□□□□□ -0.14
SMG1-203ENST00000532700 IGHV3-43DP0DP04 118 aa14.16□□□□□ -0.14
SMG1-203ENST00000532700 FABP5Q01469 135 aa14.16□□□□□ -0.14
SMG1-203ENST00000532700 SSX1Q16384 188 aa14.16□□□□□ -0.14
SMG1-203ENST00000532700 ARSJQ5FYB0 599 aaPredicted RBP14.16□□□□□ -0.14
SMG1-203ENST00000532700 ATAD3CQ5T2N8 411 aa14.16□□□□□ -0.14
SMG1-203ENST00000532700 AWAT2Q6E213 333 aa14.16□□□□□ -0.14
SMG1-203ENST00000532700 SIGIRRQ6IA17 410 aa14.16□□□□□ -0.14
SMG1-203ENST00000532700 GLIPR1L1Q6UWM5 242 aa14.16□□□□□ -0.14
SMG1-203ENST00000532700 DRAM1Q8N682 238 aa14.16□□□□□ -0.14
SMG1-203ENST00000532700 TOMM40LQ969M1 308 aa14.16□□□□□ -0.14
SMG1-203ENST00000532700 RCC2Q9P258 522 aaKnown RBP14.16□□□□□ -0.14
SMG1-203ENST00000532700 BRS3P32247 399 aa14.15□□□□□ -0.14
SMG1-203ENST00000532700 REG1BP48304 166 aa14.15□□□□□ -0.14
SMG1-203ENST00000532700 PRRX1P54821 245 aa14.15□□□□□ -0.14
SMG1-203ENST00000532700 LOXL3P58215 753 aa14.15□□□□□ -0.14
SMG1-203ENST00000532700 OXLD1Q5BKU9 147 aa14.15□□□□□ -0.14
SMG1-203ENST00000532700 ZNF497Q6ZNH5 498 aa14.15□□□□□ -0.14
SMG1-203ENST00000532700 LRRTM1Q86UE6 522 aa14.15□□□□□ -0.14
SMG1-203ENST00000532700 ZNF565Q8N9K5 539 aa14.15□□□□□ -0.14
SMG1-203ENST00000532700 OR5AU1Q8NGC0 362 aa14.15□□□□□ -0.14
SMG1-203ENST00000532700 CAPSLQ8WWF8 208 aa14.15□□□□□ -0.14
SMG1-203ENST00000532700 GHRLQ9UBU3 117 aa14.15□□□□□ -0.14
SMG1-203ENST00000532700 IGHV3-72A0A0B4J1Y9 119 aa14.14□□□□□ -0.15
SMG1-203ENST00000532700 TMEM30CPA0ZSE6 113 aa14.14□□□□□ -0.15
SMG1-203ENST00000532700 MT-ND4P03905 459 aa14.14□□□□□ -0.15
SMG1-203ENST00000532700 GTF2F2P13984 249 aa14.14□□□□□ -0.15
SMG1-203ENST00000532700 GALP22466 123 aa14.14□□□□□ -0.15
SMG1-203ENST00000532700 CEACAM3P40198 252 aa14.14□□□□□ -0.15
SMG1-203ENST00000532700 KCNJ3P48549 501 aa14.14□□□□□ -0.15
SMG1-203ENST00000532700 CD83Q01151 205 aa14.14□□□□□ -0.15
SMG1-203ENST00000532700 LINC00596Q86U02 117 aa14.14□□□□□ -0.15
SMG1-203ENST00000532700 NDUFA11Q86Y39 141 aa14.14□□□□□ -0.15
SMG1-203ENST00000532700 RPEQ96AT9 228 aa14.14□□□□□ -0.15
SMG1-203ENST00000532700 R3HDM4Q96D70 268 aa14.14□□□□□ -0.15
SMG1-203ENST00000532700 MRPS24Q96EL2 167 aaKnown RBP14.14□□□□□ -0.15
SMG1-203ENST00000532700 VCX3AQ9NNX9 186 aa14.14□□□□□ -0.15
SMG1-203ENST00000532700 A0A087WXM4 84 aa14.13□□□□□ -0.15
SMG1-203ENST00000532700 TRDV1A0A1B0GX56 115 aa14.13□□□□□ -0.15
SMG1-203ENST00000532700 C12orf77C9JDV5 145 aa14.13□□□□□ -0.15
SMG1-203ENST00000532700 UBBP0CG47 229 aa14.13□□□□□ -0.15
SMG1-203ENST00000532700 CALRP27797 417 aaKnown RBP14.13□□□□□ -0.15
SMG1-203ENST00000532700 RANBP1P43487 201 aa14.13□□□□□ -0.15
SMG1-203ENST00000532700 PSMD7P51665 324 aa14.13□□□□□ -0.15
SMG1-203ENST00000532700 HNF4GQ14541 408 aa14.13□□□□□ -0.15
SMG1-203ENST00000532700 MPV17LQ2QL34 196 aa14.13□□□□□ -0.15
SMG1-203ENST00000532700 KPRPQ5T749 579 aaPredicted RBP14.13□□□□□ -0.15
SMG1-203ENST00000532700 CD200R1LQ6Q8B3 271 aa14.13□□□□□ -0.15
SMG1-203ENST00000532700 C16orf82Q7Z2V1 217 aa14.13□□□□□ -0.15
SMG1-203ENST00000532700 TSPAN14Q8NG11 270 aa14.13□□□□□ -0.15
SMG1-203ENST00000532700 OR4K15Q8NH41 348 aa14.13□□□□□ -0.15
SMG1-203ENST00000532700 ARL11Q969Q4 196 aa14.13□□□□□ -0.15
SMG1-203ENST00000532700 FAM46BQ96A09 425 aa14.13□□□□□ -0.15
SMG1-203ENST00000532700 DNAH3Q8TD57 4116 aa14.13□□□□□ -0.15
SMG1-203ENST00000532700 OOSP1A8MZH6 123 aa14.12□□□□□ -0.15
SMG1-203ENST00000532700 MGMTP16455 207 aa14.12□□□□□ -0.15
SMG1-203ENST00000532700 RCC1P18754 421 aaPredicted RBP14.12□□□□□ -0.15
SMG1-203ENST00000532700 ZNF134P52741 427 aa14.12□□□□□ -0.15
SMG1-203ENST00000532700 NEDD8Q15843 81 aa14.12□□□□□ -0.15
SMG1-203ENST00000532700 C9orf152Q5JTZ5 239 aa14.12□□□□□ -0.15
SMG1-203ENST00000532700 C1orf100Q5SVJ3 147 aa14.12□□□□□ -0.15
SMG1-203ENST00000532700 SYT6Q5T7P8 510 aaPredicted RBP14.12□□□□□ -0.15
SMG1-203ENST00000532700 OR10K2Q6IF99 312 aa14.12□□□□□ -0.15
SMG1-203ENST00000532700 RAB12Q6IQ22 244 aa14.12□□□□□ -0.15
SMG1-203ENST00000532700 Q6ZPA2 131 aa14.12□□□□□ -0.15
SMG1-203ENST00000532700 ZNF439Q8NDP4 499 aa14.12□□□□□ -0.15
SMG1-203ENST00000532700 OR1L1Q8NH94 360 aa14.12□□□□□ -0.15
SMG1-203ENST00000532700 NEK7Q8TDX7 302 aa14.12□□□□□ -0.15
SMG1-203ENST00000532700 Q96M66 194 aa14.12□□□□□ -0.15
SMG1-203ENST00000532700 SELENOIQ9C0D9 397 aa14.12□□□□□ -0.15
SMG1-203ENST00000532700 CST11Q9H112 138 aa14.12□□□□□ -0.15
SMG1-203ENST00000532700 LINC01548A6NM66 108 aa14.11□□□□□ -0.15
SMG1-203ENST00000532700 ZNF736B4DX44 427 aaPredicted RBP14.11□□□□□ -0.15
SMG1-203ENST00000532700 H3BUI4 141 aa14.11□□□□□ -0.15
SMG1-203ENST00000532700 AIPO00170 330 aa14.11□□□□□ -0.15
SMG1-203ENST00000532700 SDCBPO00560 298 aaPredicted RBP14.11□□□□□ -0.15
SMG1-203ENST00000532700 PDCD5O14737 125 aa14.11□□□□□ -0.15
SMG1-203ENST00000532700 HSD17B6O14756 317 aa14.11□□□□□ -0.15
SMG1-203ENST00000532700 PEX14O75381 377 aa14.11□□□□□ -0.15
SMG1-203ENST00000532700 IGKV1D-33P01593 117 aa14.11□□□□□ -0.15
SMG1-203ENST00000532700 IGKV1-33P01594 117 aa14.11□□□□□ -0.15
SMG1-203ENST00000532700 CD37P11049 281 aa14.11□□□□□ -0.15
SMG1-203ENST00000532700 HTR2CP28335 458 aa14.11□□□□□ -0.15
SMG1-203ENST00000532700 MADCAM1Q13477 382 aa14.11□□□□□ -0.15
SMG1-203ENST00000532700 C18orf65Q6ZTR6 163 aa14.11□□□□□ -0.15
SMG1-203ENST00000532700 GAPTQ8N292 157 aa14.11□□□□□ -0.15
SMG1-203ENST00000532700 C5orf56Q8N8D9 126 aa14.11□□□□□ -0.15
SMG1-203ENST00000532700 OR10A7Q8NGE5 316 aa14.11□□□□□ -0.15
SMG1-203ENST00000532700 OR6M1Q8NGM8 313 aa14.11□□□□□ -0.15
SMG1-203ENST00000532700 ST6GALNAC6Q969X2 333 aa14.11□□□□□ -0.15
SMG1-203ENST00000532700 CREB3L1Q96BA8 519 aa14.11□□□□□ -0.15
SMG1-203ENST00000532700 NOL4LQ96MY1 436 aaPredicted RBP14.11□□□□□ -0.15
SMG1-203ENST00000532700 GFOD1Q9NXC2 390 aa14.11□□□□□ -0.15
SMG1-203ENST00000532700 LINC00527Q9UJ94 153 aa14.11□□□□□ -0.15
SMG1-203ENST00000532700 MOB4Q9Y3A3 225 aa14.11□□□□□ -0.15
SMG1-203ENST00000532700 AMMECR1Q9Y4X0 333 aaPredicted RBP14.11□□□□□ -0.15
SMG1-203ENST00000532700 TRAV1-2A0A0B4J238 106 aa14.1□□□□□ -0.15
SMG1-203ENST00000532700 IGHV1-3A0A0C4DH29 117 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms