RNA–Protein interactions for RNA: ENST00000532678.1

PUM1-223, Transcript of pumilio RNA binding family member 1, human

TSL 4

Gene PUM1, Length 793 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUM1-223	ENST00000532678	GABARAP	O95166	117 aa		6.55	□□□□□ -1.36
PUM1-223	ENST00000532678	TFAP2A	P05549	437 aa		6.55	□□□□□ -1.36
PUM1-223	ENST00000532678	ZNF728	P0DKX0	622 aa		6.55	□□□□□ -1.36
PUM1-223	ENST00000532678	COX7A1	P24310	79 aa		6.55	□□□□□ -1.36
PUM1-223	ENST00000532678	KCNJ3	P48549	501 aa		6.55	□□□□□ -1.36
PUM1-223	ENST00000532678	SERPINB10	P48595	397 aa		6.55	□□□□□ -1.36
PUM1-223	ENST00000532678	DLX6	P56179	175 aa		6.55	□□□□□ -1.36
PUM1-223	ENST00000532678	VBP1	P61758	197 aa		6.55	□□□□□ -1.36
PUM1-223	ENST00000532678	NCS1	P62166	190 aa		6.55	□□□□□ -1.36
PUM1-223	ENST00000532678	PAX5	Q02548	391 aa		6.55	□□□□□ -1.36
PUM1-223	ENST00000532678	RBM39	Q14498	530 aa	Known RBP	6.55	□□□□□ -1.36
PUM1-223	ENST00000532678	C2orf76	Q3KRA6	126 aa		6.55	□□□□□ -1.36
PUM1-223	ENST00000532678	GPR107	Q5VW38	600 aa		6.55	□□□□□ -1.36
PUM1-223	ENST00000532678	NCR3LG1	Q68D85	454 aa		6.55	□□□□□ -1.36
PUM1-223	ENST00000532678	SLC16A12	Q6ZSM3	486 aa		6.55	□□□□□ -1.36
PUM1-223	ENST00000532678	RTN4RL2	Q86UN3	420 aa		6.55	□□□□□ -1.36
PUM1-223	ENST00000532678	OR13A1	Q8NGR1	328 aa		6.55	□□□□□ -1.36
PUM1-223	ENST00000532678	LGALS14	Q8TCE9	139 aa		6.55	□□□□□ -1.36
PUM1-223	ENST00000532678	MRGPRD	Q8TDS7	321 aa		6.55	□□□□□ -1.36
PUM1-223	ENST00000532678	TNFRSF14	Q92956	283 aa		6.55	□□□□□ -1.36
PUM1-223	ENST00000532678	URM1	Q9BTM9	101 aa	Known RBP	6.55	□□□□□ -1.36
PUM1-223	ENST00000532678	BARHL1	Q9BZE3	327 aa		6.55	□□□□□ -1.36
PUM1-223	ENST00000532678	GAL3ST2	Q9H3Q3	398 aa		6.55	□□□□□ -1.36
PUM1-223	ENST00000532678	ZMAT3	Q9HA38	289 aa	Known RBP	6.55	□□□□□ -1.36
PUM1-223	ENST00000532678	ETAA1	Q9NY74	926 aa		6.55	□□□□□ -1.36
PUM1-223	ENST00000532678	OR6C3	Q9NZP0	311 aa		6.55	□□□□□ -1.36
PUM1-223	ENST00000532678	UBE2J1	Q9Y385	318 aa	Predicted RBP	6.55	□□□□□ -1.36
PUM1-223	ENST00000532678	PEX16	Q9Y5Y5	336 aa		6.55	□□□□□ -1.36
PUM1-223	ENST00000532678	TRAV39	A0A0B4J263	110 aa		6.54	□□□□□ -1.36
PUM1-223	ENST00000532678	IGHV1-69D	A0A0B4J2H0	117 aa		6.54	□□□□□ -1.36
PUM1-223	ENST00000532678	CENPVL3	A0A0U1RRI6	287 aa		6.54	□□□□□ -1.36
PUM1-223	ENST00000532678	hCG_1809904	A0A1W2PP81	198 aa		6.54	□□□□□ -1.36
PUM1-223	ENST00000532678		A0A1W2PPE2	198 aa		6.54	□□□□□ -1.36
PUM1-223	ENST00000532678		A0A1W2PR64	198 aa		6.54	□□□□□ -1.36
PUM1-223	ENST00000532678		A0A1W2PRD5	423 aa		6.54	□□□□□ -1.36
PUM1-223	ENST00000532678		A0A1W2PRF3	423 aa		6.54	□□□□□ -1.36
PUM1-223	ENST00000532678		A0A1W2PRM7	423 aa		6.54	□□□□□ -1.36
PUM1-223	ENST00000532678		A0A1W2PRV1	198 aa		6.54	□□□□□ -1.36
PUM1-223	ENST00000532678	UBE2QL1	A1L167	161 aa		6.54	□□□□□ -1.36
PUM1-223	ENST00000532678		H3BUI4	141 aa		6.54	□□□□□ -1.36
PUM1-223	ENST00000532678	SOCS1	O15524	211 aa		6.54	□□□□□ -1.36
PUM1-223	ENST00000532678	IGHV1-69	P01742	117 aa		6.54	□□□□□ -1.36
PUM1-223	ENST00000532678	RBP4	P02753	201 aa		6.54	□□□□□ -1.36
PUM1-223	ENST00000532678	IGHV1-8	P0DP01	117 aa		6.54	□□□□□ -1.36
PUM1-223	ENST00000532678	FUT3	P21217	361 aa		6.54	□□□□□ -1.36
PUM1-223	ENST00000532678	CHAT	P28329	748 aa		6.54	□□□□□ -1.36
PUM1-223	ENST00000532678	BLVRB	P30043	206 aa	Predicted RBP	6.54	□□□□□ -1.36
PUM1-223	ENST00000532678	SSTR5	P35346	364 aa		6.54	□□□□□ -1.36
PUM1-223	ENST00000532678	EFNB2	P52799	333 aa		6.54	□□□□□ -1.36
PUM1-223	ENST00000532678	KRTAP10-3	P60369	221 aa		6.54	□□□□□ -1.36
PUM1-223	ENST00000532678	MIDN	Q504T8	468 aa		6.54	□□□□□ -1.36
PUM1-223	ENST00000532678	IDNK	Q5T6J7	187 aa		6.54	□□□□□ -1.36
PUM1-223	ENST00000532678	PRAMEF5	Q5TYX0	476 aa		6.54	□□□□□ -1.36
PUM1-223	ENST00000532678	SLC35E4	Q6ICL7	350 aa		6.54	□□□□□ -1.36
PUM1-223	ENST00000532678	HCP5	Q6MZN7	132 aa		6.54	□□□□□ -1.36
PUM1-223	ENST00000532678	ZNF497	Q6ZNH5	498 aa		6.54	□□□□□ -1.36
PUM1-223	ENST00000532678	C1orf122	Q6ZSJ8	110 aa		6.54	□□□□□ -1.36
PUM1-223	ENST00000532678	C9orf139	Q6ZV77	190 aa		6.54	□□□□□ -1.36
PUM1-223	ENST00000532678	C6orf201	Q7Z4U5	140 aa		6.54	□□□□□ -1.36
PUM1-223	ENST00000532678	ANKRD13B	Q86YJ7	626 aa		6.54	□□□□□ -1.36
PUM1-223	ENST00000532678	PNKD	Q8N490	385 aa		6.54	□□□□□ -1.36
PUM1-223	ENST00000532678	C11orf42	Q8N5U0	333 aa		6.54	□□□□□ -1.36
PUM1-223	ENST00000532678	OR56B1	Q8NGI3	324 aa		6.54	□□□□□ -1.36
PUM1-223	ENST00000532678	CHIA	Q9BZP6	476 aa		6.54	□□□□□ -1.36
PUM1-223	ENST00000532678	TAS2R3	Q9NYW6	316 aa		6.54	□□□□□ -1.36
PUM1-223	ENST00000532678	CALY	Q9NYX4	217 aa		6.54	□□□□□ -1.36
PUM1-223	ENST00000532678	RAB22A	Q9UL26	194 aa		6.54	□□□□□ -1.36
PUM1-223	ENST00000532678	WNK1	Q9H4A3	2382 aa		6.54	□□□□□ -1.36
PUM1-223	ENST00000532678	FAM172BP	A6NC97	362 aa		6.53	□□□□□ -1.36
PUM1-223	ENST00000532678	ZNF729	A6NN14	1252 aa	Predicted RBP	6.53	□□□□□ -1.36
PUM1-223	ENST00000532678	FOXI3	A8MTJ6	420 aa	Predicted RBP	6.53	□□□□□ -1.36
PUM1-223	ENST00000532678	CLDN34	H7C241	214 aa		6.53	□□□□□ -1.36
PUM1-223	ENST00000532678	MMP23A	O75900	390 aa		6.53	□□□□□ -1.36
PUM1-223	ENST00000532678	PAH	P00439	452 aa		6.53	□□□□□ -1.36
PUM1-223	ENST00000532678	IL1A	P01583	271 aa		6.53	□□□□□ -1.36
PUM1-223	ENST00000532678	GLA	P06280	429 aa		6.53	□□□□□ -1.36
PUM1-223	ENST00000532678	MELTF	P08582	738 aa		6.53	□□□□□ -1.36
PUM1-223	ENST00000532678	CDK2	P24941	298 aa		6.53	□□□□□ -1.36
PUM1-223	ENST00000532678	RPS19	P39019	145 aa	Known RBP	6.53	□□□□□ -1.36
PUM1-223	ENST00000532678	RPL5	P46777	297 aa	Known RBP	6.53	□□□□□ -1.36
PUM1-223	ENST00000532678	VEGFC	P49767	419 aa		6.53	□□□□□ -1.36
PUM1-223	ENST00000532678	RAG2	P55895	527 aa		6.53	□□□□□ -1.36
PUM1-223	ENST00000532678	CTF1	Q16619	201 aa		6.53	□□□□□ -1.36
PUM1-223	ENST00000532678	C17orf58	Q2M2W7	97 aa		6.53	□□□□□ -1.36
PUM1-223	ENST00000532678	MOGAT2	Q3SYC2	334 aa		6.53	□□□□□ -1.36
PUM1-223	ENST00000532678	PDLIM3	Q53GG5	364 aa	Predicted RBP	6.53	□□□□□ -1.36
PUM1-223	ENST00000532678	PLAC9	Q5JTB6	97 aa		6.53	□□□□□ -1.36
PUM1-223	ENST00000532678	C16orf87	Q6PH81	154 aa		6.53	□□□□□ -1.36
PUM1-223	ENST00000532678	BAIAP2L2	Q6UXY1	529 aa		6.53	□□□□□ -1.36
PUM1-223	ENST00000532678	LCNL1	Q6ZST4	164 aa		6.53	□□□□□ -1.36
PUM1-223	ENST00000532678	CLVS1	Q8IUQ0	354 aa	Predicted RBP	6.53	□□□□□ -1.36
PUM1-223	ENST00000532678	FAM89B	Q8N5H3	189 aa		6.53	□□□□□ -1.36
PUM1-223	ENST00000532678	OR4K15	Q8NH41	348 aa		6.53	□□□□□ -1.36
PUM1-223	ENST00000532678	NDNF	Q8TB73	568 aa		6.53	□□□□□ -1.36
PUM1-223	ENST00000532678	CCDC107	Q8WV48	283 aa		6.53	□□□□□ -1.36
PUM1-223	ENST00000532678	CORO2A	Q92828	525 aa		6.53	□□□□□ -1.36
PUM1-223	ENST00000532678	SULT4A1	Q9BR01	284 aa		6.53	□□□□□ -1.36
PUM1-223	ENST00000532678	FAAP24	Q9BTP7	215 aa		6.53	□□□□□ -1.36
PUM1-223	ENST00000532678	TMEM133	Q9H2Q1	129 aa		6.53	□□□□□ -1.36
PUM1-223	ENST00000532678	NCOR1P1	Q9H4R4	102 aa		6.53	□□□□□ -1.36

Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms