RNA–Protein interactions for RNA: ENST00000531430.5

NEDD8-206, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-206ENST00000531430 PPIFP30405 207 aaKnown RBP7.14□□□□□ -1.27
NEDD8-206ENST00000531430 CHRNA7P36544 502 aa7.14□□□□□ -1.27
NEDD8-206ENST00000531430 KCNJ3P48549 501 aa7.14□□□□□ -1.27
NEDD8-206ENST00000531430 ALKBH1Q13686 389 aaKnown RBP7.14□□□□□ -1.27
NEDD8-206ENST00000531430 LIN54Q6MZP7 749 aa7.14□□□□□ -1.27
NEDD8-206ENST00000531430 ACSM6Q6P461 480 aa7.14□□□□□ -1.27
NEDD8-206ENST00000531430 FAM71E2Q8N5Q1 922 aa7.14□□□□□ -1.27
NEDD8-206ENST00000531430 TMEM104Q8NE00 496 aa7.14□□□□□ -1.27
NEDD8-206ENST00000531430 TSEN15Q8WW01 171 aaKnown RBP7.14□□□□□ -1.27
NEDD8-206ENST00000531430 EME1Q96AY2 570 aa7.14□□□□□ -1.27
NEDD8-206ENST00000531430 RITA1Q96K30 269 aa7.14□□□□□ -1.27
NEDD8-206ENST00000531430 S100A13Q99584 98 aa7.14□□□□□ -1.27
NEDD8-206ENST00000531430 SPATA25Q9BR10 227 aa7.14□□□□□ -1.27
NEDD8-206ENST00000531430 CHCHD6Q9BRQ6 235 aa7.14□□□□□ -1.27
NEDD8-206ENST00000531430 ELOVL1Q9BW60 279 aa7.14□□□□□ -1.27
NEDD8-206ENST00000531430 LINC00574Q9H8X3 128 aa7.14□□□□□ -1.27
NEDD8-206ENST00000531430 TRAPPC2LQ9UL33 140 aa7.14□□□□□ -1.27
NEDD8-206ENST00000531430 DHDHQ9UQ10 334 aa7.14□□□□□ -1.27
NEDD8-206ENST00000531430 GABRPO00591 440 aa7.13□□□□□ -1.27
NEDD8-206ENST00000531430 SLC16A6O15403 523 aa7.13□□□□□ -1.27
NEDD8-206ENST00000531430 OR8U9P0C7N5 309 aa7.13□□□□□ -1.27
NEDD8-206ENST00000531430 RAB3AP20336 220 aa7.13□□□□□ -1.27
NEDD8-206ENST00000531430 BLVRBP30043 206 aaPredicted RBP7.13□□□□□ -1.27
NEDD8-206ENST00000531430 SOX2P48431 317 aa7.13□□□□□ -1.27
NEDD8-206ENST00000531430 ZNF134P52741 427 aa7.13□□□□□ -1.27
NEDD8-206ENST00000531430 ACTBP60709 375 aa7.13□□□□□ -1.27
NEDD8-206ENST00000531430 RUNX1Q01196 453 aa7.13□□□□□ -1.27
NEDD8-206ENST00000531430 GALEQ14376 348 aa7.13□□□□□ -1.27
NEDD8-206ENST00000531430 IL13RA2Q14627 380 aa7.13□□□□□ -1.27
NEDD8-206ENST00000531430 PLGLAQ15195 96 aa7.13□□□□□ -1.27
NEDD8-206ENST00000531430 CT45A1Q5HYN5 189 aa7.13□□□□□ -1.27
NEDD8-206ENST00000531430 ELP2Q6IA86 826 aa7.13□□□□□ -1.27
NEDD8-206ENST00000531430 SLC25A48Q6ZT89 311 aaKnown RBP7.13□□□□□ -1.27
NEDD8-206ENST00000531430 KCTD20Q7Z5Y7 419 aa7.13□□□□□ -1.27
NEDD8-206ENST00000531430 Q8N1Y9 231 aa7.13□□□□□ -1.27
NEDD8-206ENST00000531430 STX19Q8N4C7 294 aa7.13□□□□□ -1.27
NEDD8-206ENST00000531430 LINC00311Q8N616 119 aa7.13□□□□□ -1.27
NEDD8-206ENST00000531430 OR52M1Q8NGK5 317 aa7.13□□□□□ -1.27
NEDD8-206ENST00000531430 OR4K15Q8NH41 348 aa7.13□□□□□ -1.27
NEDD8-206ENST00000531430 CT45A3Q8NHU0 189 aa7.13□□□□□ -1.27
NEDD8-206ENST00000531430 RNF166Q96A37 237 aaPredicted RBP7.13□□□□□ -1.27
NEDD8-206ENST00000531430 C4orf36Q96KX1 117 aa7.13□□□□□ -1.27
NEDD8-206ENST00000531430 ANKRD60Q9BZ19 345 aa7.13□□□□□ -1.27
NEDD8-206ENST00000531430 METTL9Q9H1A3 318 aa7.13□□□□□ -1.27
NEDD8-206ENST00000531430 KIAA1456Q9P272 454 aa7.13□□□□□ -1.27
NEDD8-206ENST00000531430 NKX1-2Q9UD57 310 aaPredicted RBP7.13□□□□□ -1.27
NEDD8-206ENST00000531430 TNCP24821 2201 aa7.12□□□□□ -1.27
NEDD8-206ENST00000531430 OR4C45A6NMZ5 311 aa7.12□□□□□ -1.27
NEDD8-206ENST00000531430 C15orf65H3BRN8 121 aa7.12□□□□□ -1.27
NEDD8-206ENST00000531430 AIPO00170 330 aa7.12□□□□□ -1.27
NEDD8-206ENST00000531430 GEMIN2O14893 280 aaKnown RBP7.12□□□□□ -1.27
NEDD8-206ENST00000531430 GYG2O15488 501 aa7.12□□□□□ -1.27
NEDD8-206ENST00000531430 SPINT2O43291 252 aa7.12□□□□□ -1.27
NEDD8-206ENST00000531430 TXNL1O43396 289 aa7.12□□□□□ -1.27
NEDD8-206ENST00000531430 SLC25A17O43808 307 aa7.12□□□□□ -1.27
NEDD8-206ENST00000531430 IGLV1-40P01703 118 aa7.12□□□□□ -1.27
NEDD8-206ENST00000531430 MT-ND4P03905 459 aa7.12□□□□□ -1.27
NEDD8-206ENST00000531430 HSPB1P04792 205 aaKnown RBP7.12□□□□□ -1.27
NEDD8-206ENST00000531430 RPSAP08865 295 aaKnown RBP7.12□□□□□ -1.27
NEDD8-206ENST00000531430 T-ENOLP0DO92 83 aa7.12□□□□□ -1.27
NEDD8-206ENST00000531430 SERPINA2P20848 420 aa7.12□□□□□ -1.27
NEDD8-206ENST00000531430 VEGFCP49767 419 aa7.12□□□□□ -1.27
NEDD8-206ENST00000531430 CCR9P51686 369 aa7.12□□□□□ -1.27
NEDD8-206ENST00000531430 TMED1Q13445 227 aa7.12□□□□□ -1.27
NEDD8-206ENST00000531430 HAGHQ16775 308 aa7.12□□□□□ -1.27
NEDD8-206ENST00000531430 SYT6Q5T7P8 510 aaPredicted RBP7.12□□□□□ -1.27
NEDD8-206ENST00000531430 AMIGO2Q86SJ2 522 aa7.12□□□□□ -1.27
NEDD8-206ENST00000531430 LHFPL3Q86UP9 236 aa7.12□□□□□ -1.27
NEDD8-206ENST00000531430 ZDHHC13Q8IUH4 622 aa7.12□□□□□ -1.27
NEDD8-206ENST00000531430 PXT1Q8NFP0 134 aa7.12□□□□□ -1.27
NEDD8-206ENST00000531430 OR8J1Q8NGP2 316 aa7.12□□□□□ -1.27
NEDD8-206ENST00000531430 OR52N1Q8NH53 320 aa7.12□□□□□ -1.27
NEDD8-206ENST00000531430 OR5AK2Q8NH90 309 aa7.12□□□□□ -1.27
NEDD8-206ENST00000531430 OR1L1Q8NH94 360 aa7.12□□□□□ -1.27
NEDD8-206ENST00000531430 FLYWCH2Q96CP2 140 aaKnown RBP7.12□□□□□ -1.27
NEDD8-206ENST00000531430 CPNE2Q96FN4 548 aaPredicted RBP7.12□□□□□ -1.27
NEDD8-206ENST00000531430 CLCC1Q96S66 551 aa7.12□□□□□ -1.27
NEDD8-206ENST00000531430 TOLLIPQ9H0E2 274 aa7.12□□□□□ -1.27
NEDD8-206ENST00000531430 ZNF355PQ9NSJ1 428 aa7.12□□□□□ -1.27
NEDD8-206ENST00000531430 IMPAD1Q9NX62 359 aa7.12□□□□□ -1.27
NEDD8-206ENST00000531430 MRPS28Q9Y2Q9 187 aaKnown RBP7.12□□□□□ -1.27
NEDD8-206ENST00000531430 HYDINQ4G0P3 5121 aa7.11□□□□□ -1.27
NEDD8-206ENST00000531430 IGHV7-81A0A0B4J1V7 117 aa7.11□□□□□ -1.27
NEDD8-206ENST00000531430 TCRBV3S1A0A5B6 114 aa7.11□□□□□ -1.27
NEDD8-206ENST00000531430 ANKRD34BA5PLL1 514 aa7.11□□□□□ -1.27
NEDD8-206ENST00000531430 MCRIP1C9JLW8 97 aa7.11□□□□□ -1.27
NEDD8-206ENST00000531430 NBR2O15453 112 aa7.11□□□□□ -1.27
NEDD8-206ENST00000531430 ORC5O43913 435 aa7.11□□□□□ -1.27
NEDD8-206ENST00000531430 LGALS1P09382 135 aaKnown RBP7.11□□□□□ -1.27
NEDD8-206ENST00000531430 CD40LGP29965 261 aa7.11□□□□□ -1.27
NEDD8-206ENST00000531430 VHLP40337 213 aa7.11□□□□□ -1.27
NEDD8-206ENST00000531430 TPPP2P59282 170 aa7.11□□□□□ -1.27
NEDD8-206ENST00000531430 TMEM267Q0VDI3 215 aaPredicted RBP7.11□□□□□ -1.27
NEDD8-206ENST00000531430 LSAMPQ13449 338 aa7.11□□□□□ -1.27
NEDD8-206ENST00000531430 C5orf64Q2M2E5 130 aa7.11□□□□□ -1.27
NEDD8-206ENST00000531430 KDM4DQ6B0I6 523 aa7.11□□□□□ -1.27
NEDD8-206ENST00000531430 FDX2Q6P4F2 183 aa7.11□□□□□ -1.27
NEDD8-206ENST00000531430 OR52L2PQ8NGH6 319 aa7.11□□□□□ -1.27
NEDD8-206ENST00000531430 OR51A2Q8NGJ7 313 aa7.11□□□□□ -1.27
NEDD8-206ENST00000531430 IL17DQ8TAD2 202 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms