RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 THOC7Q6I9Y2 204 aaKnown RBP12.44□□□□□ -0.42
ECHDC1-220ENST00000528402 ZNF826PQ6ZT77 177 aa12.44□□□□□ -0.42
ECHDC1-220ENST00000528402 HSD17B13Q7Z5P4 300 aaPredicted RBP12.44□□□□□ -0.42
ECHDC1-220ENST00000528402 SLC35G3Q8N808 338 aa12.44□□□□□ -0.42
ECHDC1-220ENST00000528402 OR4D5Q8NGN0 318 aa12.44□□□□□ -0.42
ECHDC1-220ENST00000528402 LRRC29Q8WV35 223 aa12.44□□□□□ -0.42
ECHDC1-220ENST00000528402 SNRNP40Q96DI7 357 aaKnown RBP12.44□□□□□ -0.42
ECHDC1-220ENST00000528402 DIRC2Q96SL1 478 aa12.44□□□□□ -0.42
ECHDC1-220ENST00000528402 POMT1Q9Y6A1 747 aa12.44□□□□□ -0.42
ECHDC1-220ENST00000528402 PSPNO60542 156 aa12.43□□□□□ -0.42
ECHDC1-220ENST00000528402 MBPP02686 304 aaPredicted RBP12.43□□□□□ -0.42
ECHDC1-220ENST00000528402 PRDX2P32119 198 aa12.43□□□□□ -0.42
ECHDC1-220ENST00000528402 RNF141Q8WVD5 230 aa12.43□□□□□ -0.42
ECHDC1-220ENST00000528402 IL1F10Q8WWZ1 152 aa12.43□□□□□ -0.42
ECHDC1-220ENST00000528402 MEGF10Q96KG7 1140 aa12.43□□□□□ -0.42
ECHDC1-220ENST00000528402 SNX22Q96L94 193 aa12.43□□□□□ -0.42
ECHDC1-220ENST00000528402 PLEKHF2Q9H8W4 249 aa12.43□□□□□ -0.42
ECHDC1-220ENST00000528402 RAB9BQ9NP90 201 aa12.43□□□□□ -0.42
ECHDC1-220ENST00000528402 NGBQ9NPG2 151 aa12.43□□□□□ -0.42
ECHDC1-220ENST00000528402 CYTL1Q9NRR1 136 aa12.43□□□□□ -0.42
ECHDC1-220ENST00000528402 UFSP2Q9NUQ7 469 aa12.43□□□□□ -0.42
ECHDC1-220ENST00000528402 IL19Q9UHD0 177 aa12.43□□□□□ -0.42
ECHDC1-220ENST00000528402 LSM5Q9Y4Y9 91 aaKnown RBP12.43□□□□□ -0.42
ECHDC1-220ENST00000528402 RBM7Q9Y580 266 aaKnown RBP12.43□□□□□ -0.42
ECHDC1-220ENST00000528402 NUDT19A8MXV4 375 aa12.42□□□□□ -0.42
ECHDC1-220ENST00000528402 GPR137BO60478 399 aa12.42□□□□□ -0.42
ECHDC1-220ENST00000528402 SERPINE2P07093 398 aa12.42□□□□□ -0.42
ECHDC1-220ENST00000528402 GZMHP20718 246 aa12.42□□□□□ -0.42
ECHDC1-220ENST00000528402 IL2RGP31785 369 aa12.42□□□□□ -0.42
ECHDC1-220ENST00000528402 CEACAM6P40199 344 aa12.42□□□□□ -0.42
ECHDC1-220ENST00000528402 CASP6P55212 293 aa12.42□□□□□ -0.42
ECHDC1-220ENST00000528402 TESK1Q15569 626 aa12.42□□□□□ -0.42
ECHDC1-220ENST00000528402 MEX3BQ6ZN04 569 aaKnown RBP12.42□□□□□ -0.42
ECHDC1-220ENST00000528402 TCTEX1D1Q8N7M0 179 aa12.42□□□□□ -0.42
ECHDC1-220ENST00000528402 LHFPL5Q8TAF8 219 aa12.42□□□□□ -0.42
ECHDC1-220ENST00000528402 RND1Q92730 232 aa12.42□□□□□ -0.42
ECHDC1-220ENST00000528402 VKORC1Q9BQB6 163 aa12.42□□□□□ -0.42
ECHDC1-220ENST00000528402 FAM212BQ9NTI7 297 aaPredicted RBP12.42□□□□□ -0.42
ECHDC1-220ENST00000528402 A0A1B0GU03 582 aa12.41□□□□□ -0.42
ECHDC1-220ENST00000528402 MFSD2BA6NFX1 497 aa12.41□□□□□ -0.42
ECHDC1-220ENST00000528402 WNT9BO14905 357 aa12.41□□□□□ -0.42
ECHDC1-220ENST00000528402 SCGB1D2O95969 90 aa12.41□□□□□ -0.42
ECHDC1-220ENST00000528402 LHBP01229 141 aa12.41□□□□□ -0.42
ECHDC1-220ENST00000528402 ADH4P08319 380 aa12.41□□□□□ -0.42
ECHDC1-220ENST00000528402 NKX2-1P43699 371 aaPredicted RBP12.41□□□□□ -0.42
ECHDC1-220ENST00000528402 OR3A1P47881 315 aa12.41□□□□□ -0.42
ECHDC1-220ENST00000528402 P2RX3P56373 397 aa12.41□□□□□ -0.42
ECHDC1-220ENST00000528402 COL10A1Q03692 680 aa12.41□□□□□ -0.42
ECHDC1-220ENST00000528402 KRBOX4Q5JUW0 171 aa12.41□□□□□ -0.42
ECHDC1-220ENST00000528402 NINJ1Q92982 152 aa12.41□□□□□ -0.42
ECHDC1-220ENST00000528402 LSM10Q969L4 123 aaKnown RBP12.41□□□□□ -0.42
ECHDC1-220ENST00000528402 REG4Q9BYZ8 158 aa12.41□□□□□ -0.42
ECHDC1-220ENST00000528402 LIN7CQ9NUP9 197 aaKnown RBP12.41□□□□□ -0.42
ECHDC1-220ENST00000528402 SDHAF2Q9NX18 166 aa12.41□□□□□ -0.42
ECHDC1-220ENST00000528402 BORCS7-ASMTA0A0B4J1R7 106 aa12.4□□□□□ -0.42
ECHDC1-220ENST00000528402 MSGN1A6NI15 193 aa12.4□□□□□ -0.42
ECHDC1-220ENST00000528402 ZSCAN5BA6NJL1 495 aa12.4□□□□□ -0.42
ECHDC1-220ENST00000528402 KRBOX1C9JBD0 128 aa12.4□□□□□ -0.42
ECHDC1-220ENST00000528402 ATP6V1G2-DDX39BF2Z307 99 aa12.4□□□□□ -0.42
ECHDC1-220ENST00000528402 I3L521 148 aa12.4□□□□□ -0.42
ECHDC1-220ENST00000528402 MGST3O14880 152 aa12.4□□□□□ -0.42
ECHDC1-220ENST00000528402 SPINT2O43291 252 aa12.4□□□□□ -0.42
ECHDC1-220ENST00000528402 FGF16O43320 207 aa12.4□□□□□ -0.42
ECHDC1-220ENST00000528402 ATG12O94817 140 aa12.4□□□□□ -0.42
ECHDC1-220ENST00000528402 PSG2P11465 335 aa12.4□□□□□ -0.42
ECHDC1-220ENST00000528402 HTD2P86397 168 aa12.4□□□□□ -0.42
ECHDC1-220ENST00000528402 CR1LQ2VPA4 569 aa12.4□□□□□ -0.42
ECHDC1-220ENST00000528402 NMSQ5H8A3 153 aa12.4□□□□□ -0.42
ECHDC1-220ENST00000528402 ALKBH2Q6NS38 261 aa12.4□□□□□ -0.42
ECHDC1-220ENST00000528402 LRP11Q86VZ4 500 aa12.4□□□□□ -0.42
ECHDC1-220ENST00000528402 ZGRF1Q86YA3 2104 aa12.4□□□□□ -0.42
ECHDC1-220ENST00000528402 FOXRED2Q8IWF2 684 aa12.4□□□□□ -0.42
ECHDC1-220ENST00000528402 OR2V2Q96R30 315 aa12.4□□□□□ -0.42
ECHDC1-220ENST00000528402 SLC25A31Q9H0C2 315 aa12.4□□□□□ -0.42
ECHDC1-220ENST00000528402 ASF1BQ9NVP2 202 aa12.4□□□□□ -0.42
ECHDC1-220ENST00000528402 OR1A1Q9P1Q5 309 aa12.4□□□□□ -0.42
ECHDC1-220ENST00000528402 IGHV3-64DA0A0J9YX35 117 aa12.39□□□□□ -0.43
ECHDC1-220ENST00000528402 NKX2-6A6NCS4 301 aa12.39□□□□□ -0.43
ECHDC1-220ENST00000528402 SHOXO15266 292 aa12.39□□□□□ -0.43
ECHDC1-220ENST00000528402 GABRA2P47869 451 aa12.39□□□□□ -0.43
ECHDC1-220ENST00000528402 ID3Q02535 119 aa12.39□□□□□ -0.43
ECHDC1-220ENST00000528402 AESQ08117 197 aa12.39□□□□□ -0.43
ECHDC1-220ENST00000528402 MSMPQ1L6U9 139 aa12.39□□□□□ -0.43
ECHDC1-220ENST00000528402 C5orf24Q7Z6I8 188 aa12.39□□□□□ -0.43
ECHDC1-220ENST00000528402 ZNF645Q8N7E2 425 aa12.39□□□□□ -0.43
ECHDC1-220ENST00000528402 UBAC2Q8NBM4 344 aa12.39□□□□□ -0.43
ECHDC1-220ENST00000528402 OR52M1Q8NGK5 317 aa12.39□□□□□ -0.43
ECHDC1-220ENST00000528402 Q8TCH9 128 aa12.39□□□□□ -0.43
ECHDC1-220ENST00000528402 SAT2Q96F10 170 aaPredicted RBP12.39□□□□□ -0.43
ECHDC1-220ENST00000528402 COQ2Q96H96 371 aa12.39□□□□□ -0.43
ECHDC1-220ENST00000528402 MRPL37Q9BZE1 423 aaKnown RBP12.39□□□□□ -0.43
ECHDC1-220ENST00000528402 RNF7Q9UBF6 113 aa12.39□□□□□ -0.43
ECHDC1-220ENST00000528402 ACACAQ13085 2346 aa12.39□□□□□ -0.43
ECHDC1-220ENST00000528402 PRR14LQ5THK1 2151 aa12.39□□□□□ -0.43
ECHDC1-220ENST00000528402 CUL9Q8IWT3 2517 aa12.39□□□□□ -0.43
ECHDC1-220ENST00000528402 C12orf77C9JDV5 145 aa12.38□□□□□ -0.43
ECHDC1-220ENST00000528402 SPRY3O43610 288 aa12.38□□□□□ -0.43
ECHDC1-220ENST00000528402 ZNF737O75373 536 aa12.38□□□□□ -0.43
ECHDC1-220ENST00000528402 HBZP02008 142 aa12.38□□□□□ -0.43
ECHDC1-220ENST00000528402 FGF2P09038 288 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms