RNA–Protein interactions for RNA: ENST00000528036.5

PKP3-206, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-206ENST00000528036 MAGEA13PA6NCF6 341 aa18.4■□□□□ 0.54
PKP3-206ENST00000528036 CRTAPO75718 401 aaPredicted RBP18.4■□□□□ 0.54
PKP3-206ENST00000528036 IGHV3-7P01780 117 aa18.4■□□□□ 0.54
PKP3-206ENST00000528036 LOXL3P58215 753 aa18.4■□□□□ 0.54
PKP3-206ENST00000528036 SYT6Q5T7P8 510 aaPredicted RBP18.4■□□□□ 0.54
PKP3-206ENST00000528036 GLT8D1Q68CQ7 371 aa18.4■□□□□ 0.54
PKP3-206ENST00000528036 LYPD6Q86Y78 171 aa18.4■□□□□ 0.54
PKP3-206ENST00000528036 COMMD1Q8N668 190 aa18.4■□□□□ 0.54
PKP3-206ENST00000528036 CCDC107Q8WV48 283 aa18.4■□□□□ 0.54
PKP3-206ENST00000528036 KCNIP1Q9NZI2 227 aa18.4■□□□□ 0.54
PKP3-206ENST00000528036 TRAV39A0A0B4J263 110 aa18.39■□□□□ 0.53
PKP3-206ENST00000528036 IGHV1-3A0A0C4DH29 117 aa18.39■□□□□ 0.53
PKP3-206ENST00000528036 H0YHG0 523 aa18.39■□□□□ 0.53
PKP3-206ENST00000528036 PIN1P1O15428 100 aa18.39■□□□□ 0.53
PKP3-206ENST00000528036 SC5DO75845 299 aa18.39■□□□□ 0.53
PKP3-206ENST00000528036 CD1BP29016 333 aa18.39■□□□□ 0.53
PKP3-206ENST00000528036 SLC6A1P30531 599 aa18.39■□□□□ 0.53
PKP3-206ENST00000528036 ACSM3Q53FZ2 586 aa18.39■□□□□ 0.53
PKP3-206ENST00000528036 C6orf141Q5SZD1 244 aa18.39■□□□□ 0.53
PKP3-206ENST00000528036 UNQ9370/PRO34162Q6UXP9 181 aa18.39■□□□□ 0.53
PKP3-206ENST00000528036 MOB3BQ86TA1 216 aa18.39■□□□□ 0.53
PKP3-206ENST00000528036 IZUMO1Q8IYV9 350 aa18.39■□□□□ 0.53
PKP3-206ENST00000528036 C5orf56Q8N8D9 126 aa18.39■□□□□ 0.53
PKP3-206ENST00000528036 OR8H1Q8NGG4 311 aa18.39■□□□□ 0.53
PKP3-206ENST00000528036 OR2T10Q8NGZ9 312 aa18.39■□□□□ 0.53
PKP3-206ENST00000528036 Q96M66 194 aa18.39■□□□□ 0.53
PKP3-206ENST00000528036 ZNF581Q9P0T4 197 aa18.39■□□□□ 0.53
PKP3-206ENST00000528036 GNG12Q9UBI6 72 aa18.39■□□□□ 0.53
PKP3-206ENST00000528036 PSMB11A5LHX3 300 aa18.38■□□□□ 0.53
PKP3-206ENST00000528036 PDCD6O75340 191 aa18.38■□□□□ 0.53
PKP3-206ENST00000528036 DUS4LO95620 317 aaKnown RBP18.38■□□□□ 0.53
PKP3-206ENST00000528036 IGKV1D-33P01593 117 aa18.38■□□□□ 0.53
PKP3-206ENST00000528036 IGKV1-33P01594 117 aa18.38■□□□□ 0.53
PKP3-206ENST00000528036 CD33P20138 364 aa18.38■□□□□ 0.53
PKP3-206ENST00000528036 SLC35B1P78383 322 aa18.38■□□□□ 0.53
PKP3-206ENST00000528036 SPHARQ15513 63 aa18.38■□□□□ 0.53
PKP3-206ENST00000528036 FOXRED2Q8IWF2 684 aa18.38■□□□□ 0.53
PKP3-206ENST00000528036 GON7Q9BXV9 100 aa18.38■□□□□ 0.53
PKP3-206ENST00000528036 TPRKBQ9Y3C4 175 aa18.38■□□□□ 0.53
PKP3-206ENST00000528036 C12orf77C9JDV5 145 aa18.37■□□□□ 0.53
PKP3-206ENST00000528036 PTGES3LE9PB15 166 aa18.37■□□□□ 0.53
PKP3-206ENST00000528036 PF4P02776 101 aa18.37■□□□□ 0.53
PKP3-206ENST00000528036 ZNF137PP52743 207 aa18.37■□□□□ 0.53
PKP3-206ENST00000528036 GABPB1Q06547 395 aaPredicted RBP18.37■□□□□ 0.53
PKP3-206ENST00000528036 HIST2H2BDQ6DRA6 164 aa18.37■□□□□ 0.53
PKP3-206ENST00000528036 SLC25A48Q6ZT89 311 aaKnown RBP18.37■□□□□ 0.53
PKP3-206ENST00000528036 TGIF2LXQ8IUE1 241 aa18.37■□□□□ 0.53
PKP3-206ENST00000528036 ST6GALNAC6Q969X2 333 aa18.37■□□□□ 0.53
PKP3-206ENST00000528036 BANF2Q9H503 90 aa18.37■□□□□ 0.53
PKP3-206ENST00000528036 NECAP2Q9NVZ3 263 aa18.37■□□□□ 0.53
PKP3-206ENST00000528036 PLXNB1O43157 2135 aa18.36■□□□□ 0.53
PKP3-206ENST00000528036 DIAPH2-AS1Q14236 149 aa18.36■□□□□ 0.53
PKP3-206ENST00000528036 TCTEX1D4Q5JR98 221 aa18.36■□□□□ 0.53
PKP3-206ENST00000528036 OR51D1Q8NGF3 324 aa18.36■□□□□ 0.53
PKP3-206ENST00000528036 RTN4IP1Q8WWV3 396 aaPredicted RBP18.36■□□□□ 0.53
PKP3-206ENST00000528036 NEDD4LQ96PU5 975 aa18.36■□□□□ 0.53
PKP3-206ENST00000528036 VCX3BQ9H321 246 aa18.36■□□□□ 0.53
PKP3-206ENST00000528036 ZFP57Q9NU63 452 aa18.36■□□□□ 0.53
PKP3-206ENST00000528036 MBNL3Q9NUK0 354 aaKnown RBP18.36■□□□□ 0.53
PKP3-206ENST00000528036 NOTCH3Q9UM47 2321 aa18.36■□□□□ 0.53
PKP3-206ENST00000528036 A0A1W2PPE3 182 aa18.35■□□□□ 0.53
PKP3-206ENST00000528036 A0A1W2PRX2 142 aa18.35■□□□□ 0.53
PKP3-206ENST00000528036 SERPINE3A8MV23 424 aa18.35■□□□□ 0.53
PKP3-206ENST00000528036 RGS11O94810 467 aa18.35■□□□□ 0.53
PKP3-206ENST00000528036 IGHG2P01859 326 aa18.35■□□□□ 0.53
PKP3-206ENST00000528036 HBZP02008 142 aa18.35■□□□□ 0.53
PKP3-206ENST00000528036 SLC35A2P78381 396 aa18.35■□□□□ 0.53
PKP3-206ENST00000528036 HNF4GQ14541 408 aa18.35■□□□□ 0.53
PKP3-206ENST00000528036 TRAM1Q15629 374 aa18.35■□□□□ 0.53
PKP3-206ENST00000528036 SLC35E3Q7Z769 313 aa18.35■□□□□ 0.53
PKP3-206ENST00000528036 TMEM104Q8NE00 496 aa18.35■□□□□ 0.53
PKP3-206ENST00000528036 OR4K15Q8NH41 348 aa18.35■□□□□ 0.53
PKP3-206ENST00000528036 KCNG3Q8TAE7 436 aa18.35■□□□□ 0.53
PKP3-206ENST00000528036 EAF1Q96JC9 268 aaPredicted RBP18.35■□□□□ 0.53
PKP3-206ENST00000528036 GPR61Q9BZJ8 451 aa18.35■□□□□ 0.53
PKP3-206ENST00000528036 LIN7CQ9NUP9 197 aaKnown RBP18.35■□□□□ 0.53
PKP3-206ENST00000528036 BPNT1O95861 308 aa18.34■□□□□ 0.53
PKP3-206ENST00000528036 MOSP00540 346 aa18.34■□□□□ 0.53
PKP3-206ENST00000528036 SRMP19623 302 aa18.34■□□□□ 0.53
PKP3-206ENST00000528036 HTD2P86397 168 aa18.34■□□□□ 0.53
PKP3-206ENST00000528036 HSD17B12Q53GQ0 312 aa18.34■□□□□ 0.53
PKP3-206ENST00000528036 FBLN7Q53RD9 439 aa18.34■□□□□ 0.53
PKP3-206ENST00000528036 KHDC1LQ5JSQ8 128 aa18.34■□□□□ 0.53
PKP3-206ENST00000528036 LY6G6FQ5SQ64 297 aa18.34■□□□□ 0.53
PKP3-206ENST00000528036 C1orf100Q5SVJ3 147 aa18.34■□□□□ 0.53
PKP3-206ENST00000528036 SGCDQ92629 289 aa18.34■□□□□ 0.53
PKP3-206ENST00000528036 UFD1Q92890 307 aa18.34■□□□□ 0.53
PKP3-206ENST00000528036 RCC1LQ96I51 464 aaKnown RBP18.34■□□□□ 0.53
PKP3-206ENST00000528036 TAF9BQ9HBM6 251 aa18.34■□□□□ 0.53
PKP3-206ENST00000528036 ISYNA1Q9NPH2 558 aa18.34■□□□□ 0.53
PKP3-206ENST00000528036 JPT1Q9UK76 154 aa18.34■□□□□ 0.53
PKP3-206ENST00000528036 NCBP2LA6PVI3 153 aaKnown RBP18.33■□□□□ 0.52
PKP3-206ENST00000528036 PSMA1P25786 263 aaKnown RBP18.33■□□□□ 0.52
PKP3-206ENST00000528036 MED22Q15528 200 aa18.33■□□□□ 0.52
PKP3-206ENST00000528036 OXLD1Q5BKU9 147 aa18.33■□□□□ 0.52
PKP3-206ENST00000528036 RBM48Q5RL73 367 aaKnown RBP18.33■□□□□ 0.52
PKP3-206ENST00000528036 Q8N6K4 173 aa18.33■□□□□ 0.52
PKP3-206ENST00000528036 ZNF439Q8NDP4 499 aa18.33■□□□□ 0.52
PKP3-206ENST00000528036 TMED9Q9BVK6 235 aa18.33■□□□□ 0.52
PKP3-206ENST00000528036 OR2S2Q9NQN1 319 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms