RNA–Protein interactions for RNA: ENST00000527897.1

CAPN1-213, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-213ENST00000527897 C6orf183Q5T699 404 aa12.41□□□□□ -0.42
CAPN1-213ENST00000527897 SLC16A12Q6ZSM3 486 aa12.41□□□□□ -0.42
CAPN1-213ENST00000527897 MOB3BQ86TA1 216 aa12.41□□□□□ -0.42
CAPN1-213ENST00000527897 OR10V1Q8NGI7 309 aa12.41□□□□□ -0.42
CAPN1-213ENST00000527897 OR1L1Q8NH94 360 aa12.41□□□□□ -0.42
CAPN1-213ENST00000527897 PHYHIPQ92561 330 aa12.41□□□□□ -0.42
CAPN1-213ENST00000527897 GFOD1Q9NXC2 390 aa12.41□□□□□ -0.42
CAPN1-213ENST00000527897 GNG12Q9UBI6 72 aa12.41□□□□□ -0.42
CAPN1-213ENST00000527897 GHRLQ9UBU3 117 aa12.41□□□□□ -0.42
CAPN1-213ENST00000527897 IGHV3-72A0A0B4J1Y9 119 aa12.4□□□□□ -0.42
CAPN1-213ENST00000527897 A0A1W2PPI3 338 aa12.4□□□□□ -0.42
CAPN1-213ENST00000527897 A0A1W2PRX2 142 aa12.4□□□□□ -0.42
CAPN1-213ENST00000527897 FAM90A10PA6NDY2 464 aa12.4□□□□□ -0.42
CAPN1-213ENST00000527897 FAM90A18PA6NE21 464 aa12.4□□□□□ -0.42
CAPN1-213ENST00000527897 FAM90A16PA6NEW6 464 aa12.4□□□□□ -0.42
CAPN1-213ENST00000527897 FAM90A20PA6NIJ5 464 aa12.4□□□□□ -0.42
CAPN1-213ENST00000527897 FAM90A7PA6NKC0 464 aa12.4□□□□□ -0.42
CAPN1-213ENST00000527897 FAM90A12PA8MX19 464 aa12.4□□□□□ -0.42
CAPN1-213ENST00000527897 FAM90A5PA8MXJ8 464 aa12.4□□□□□ -0.42
CAPN1-213ENST00000527897 FAM90A23PA8MXZ1 464 aa12.4□□□□□ -0.42
CAPN1-213ENST00000527897 HSD17B6O14756 317 aa12.4□□□□□ -0.42
CAPN1-213ENST00000527897 PDCD6O75340 191 aa12.4□□□□□ -0.42
CAPN1-213ENST00000527897 UCHL1P09936 223 aa12.4□□□□□ -0.42
CAPN1-213ENST00000527897 FAM90A15PP0C7V4 464 aa12.4□□□□□ -0.42
CAPN1-213ENST00000527897 FAM90A13PP0C7W8 464 aa12.4□□□□□ -0.42
CAPN1-213ENST00000527897 FAM90A14PP0C7W9 464 aa12.4□□□□□ -0.42
CAPN1-213ENST00000527897 FAM90A24PP0C7X0 464 aa12.4□□□□□ -0.42
CAPN1-213ENST00000527897 UBBP0CG47 229 aa12.4□□□□□ -0.42
CAPN1-213ENST00000527897 VSIG8P0DPA2 414 aa12.4□□□□□ -0.42
CAPN1-213ENST00000527897 TMEM11P17152 192 aa12.4□□□□□ -0.42
CAPN1-213ENST00000527897 RAB7AP51149 207 aa12.4□□□□□ -0.42
CAPN1-213ENST00000527897 SIGIRRQ6IA17 410 aa12.4□□□□□ -0.42
CAPN1-213ENST00000527897 PRSS48Q7RTY5 328 aa12.4□□□□□ -0.42
CAPN1-213ENST00000527897 CENPVQ7Z7K6 275 aaPredicted RBP12.4□□□□□ -0.42
CAPN1-213ENST00000527897 C1QL4Q86Z23 238 aa12.4□□□□□ -0.42
CAPN1-213ENST00000527897 NEDD4LQ96PU5 975 aa12.4□□□□□ -0.42
CAPN1-213ENST00000527897 CITED2Q99967 270 aaPredicted RBP12.4□□□□□ -0.42
CAPN1-213ENST00000527897 TMEM59Q9BXS4 323 aa12.4□□□□□ -0.42
CAPN1-213ENST00000527897 PLGRKTQ9HBL7 147 aa12.4□□□□□ -0.42
CAPN1-213ENST00000527897 RAB9BQ9NP90 201 aa12.4□□□□□ -0.42
CAPN1-213ENST00000527897 SC5DO75845 299 aa12.39□□□□□ -0.43
CAPN1-213ENST00000527897 ATP6V1G2O95670 118 aa12.39□□□□□ -0.43
CAPN1-213ENST00000527897 IGKV1D-33P01593 117 aa12.39□□□□□ -0.43
CAPN1-213ENST00000527897 IGKV1-33P01594 117 aa12.39□□□□□ -0.43
CAPN1-213ENST00000527897 HBZP02008 142 aa12.39□□□□□ -0.43
CAPN1-213ENST00000527897 GAPDHP04406 335 aaKnown RBP12.39□□□□□ -0.43
CAPN1-213ENST00000527897 IL3RAP26951 378 aa12.39□□□□□ -0.43
CAPN1-213ENST00000527897 HTR2CP28335 458 aa12.39□□□□□ -0.43
CAPN1-213ENST00000527897 MLLT11Q13015 90 aaPredicted RBP12.39□□□□□ -0.43
CAPN1-213ENST00000527897 TPBGQ13641 420 aa12.39□□□□□ -0.43
CAPN1-213ENST00000527897 P2RY14Q15391 338 aa12.39□□□□□ -0.43
CAPN1-213ENST00000527897 C1orf100Q5SVJ3 147 aa12.39□□□□□ -0.43
CAPN1-213ENST00000527897 TMEM91Q6ZNR0 172 aa12.39□□□□□ -0.43
CAPN1-213ENST00000527897 OR8H3Q8N146 312 aa12.39□□□□□ -0.43
CAPN1-213ENST00000527897 OR5AU1Q8NGC0 362 aa12.39□□□□□ -0.43
CAPN1-213ENST00000527897 OR52M1Q8NGK5 317 aa12.39□□□□□ -0.43
CAPN1-213ENST00000527897 MGLLQ99685 303 aa12.39□□□□□ -0.43
CAPN1-213ENST00000527897 OCSTAMPQ9BR26 566 aa12.39□□□□□ -0.43
CAPN1-213ENST00000527897 WNT10AQ9GZT5 417 aa12.39□□□□□ -0.43
CAPN1-213ENST00000527897 KCNIP1Q9NZI2 227 aa12.39□□□□□ -0.43
CAPN1-213ENST00000527897 BLOC1S6Q9UL45 172 aa12.39□□□□□ -0.43
CAPN1-213ENST00000527897 MOB4Q9Y3A3 225 aa12.39□□□□□ -0.43
CAPN1-213ENST00000527897 AK6Q9Y3D8 172 aaKnown RBP12.39□□□□□ -0.43
CAPN1-213ENST00000527897 SLC31A2O15432 143 aa12.38□□□□□ -0.43
CAPN1-213ENST00000527897 CPEP16870 476 aa12.38□□□□□ -0.43
CAPN1-213ENST00000527897 CALRP27797 417 aaKnown RBP12.38□□□□□ -0.43
CAPN1-213ENST00000527897 LOXL3P58215 753 aa12.38□□□□□ -0.43
CAPN1-213ENST00000527897 RPS27AP62979 156 aaKnown RBP12.38□□□□□ -0.43
CAPN1-213ENST00000527897 TRAM1Q15629 374 aa12.38□□□□□ -0.43
CAPN1-213ENST00000527897 TRAT1Q6PIZ9 186 aa12.38□□□□□ -0.43
CAPN1-213ENST00000527897 C6orf201Q7Z4U5 140 aa12.38□□□□□ -0.43
CAPN1-213ENST00000527897 C5orf24Q7Z6I8 188 aa12.38□□□□□ -0.43
CAPN1-213ENST00000527897 OR6M1Q8NGM8 313 aa12.38□□□□□ -0.43
CAPN1-213ENST00000527897 KCNG3Q8TAE7 436 aa12.38□□□□□ -0.43
CAPN1-213ENST00000527897 R3HDM4Q96D70 268 aa12.38□□□□□ -0.43
CAPN1-213ENST00000527897 NICN1Q9BSH3 213 aa12.38□□□□□ -0.43
CAPN1-213ENST00000527897 FAAP24Q9BTP7 215 aa12.38□□□□□ -0.43
CAPN1-213ENST00000527897 TAF9BQ9HBM6 251 aa12.38□□□□□ -0.43
CAPN1-213ENST00000527897 CHMP1AQ9HD42 196 aaPredicted RBP12.38□□□□□ -0.43
CAPN1-213ENST00000527897 ISYNA1Q9NPH2 558 aa12.38□□□□□ -0.43
CAPN1-213ENST00000527897 NOTCH1P46531 2555 aa12.37□□□□□ -0.43
CAPN1-213ENST00000527897 IGHV1-3A0A0C4DH29 117 aa12.37□□□□□ -0.43
CAPN1-213ENST00000527897 FAM90A9PA6NNJ1 464 aa12.37□□□□□ -0.43
CAPN1-213ENST00000527897 M0QZK8 103 aa12.37□□□□□ -0.43
CAPN1-213ENST00000527897 SLC22A1O15245 554 aa12.37□□□□□ -0.43
CAPN1-213ENST00000527897 CA11O75493 328 aa12.37□□□□□ -0.43
CAPN1-213ENST00000527897 ARL6IP5O75915 188 aa12.37□□□□□ -0.43
CAPN1-213ENST00000527897 AMY1AP04745 511 aa12.37□□□□□ -0.43
CAPN1-213ENST00000527897 AMY2AP04746 511 aa12.37□□□□□ -0.43
CAPN1-213ENST00000527897 GLAP06280 429 aa12.37□□□□□ -0.43
CAPN1-213ENST00000527897 PSMA1P25786 263 aaKnown RBP12.37□□□□□ -0.43
CAPN1-213ENST00000527897 FABP5Q01469 135 aa12.37□□□□□ -0.43
CAPN1-213ENST00000527897 UNC119Q13432 240 aa12.37□□□□□ -0.43
CAPN1-213ENST00000527897 KHDC1LQ5JSQ8 128 aa12.37□□□□□ -0.43
CAPN1-213ENST00000527897 THNSL2Q86YJ6 484 aa12.37□□□□□ -0.43
CAPN1-213ENST00000527897 SETD6Q8TBK2 473 aa12.37□□□□□ -0.43
CAPN1-213ENST00000527897 MRPL30Q8TCC3 161 aaKnown RBP12.37□□□□□ -0.43
CAPN1-213ENST00000527897 SULT4A1Q9BR01 284 aa12.37□□□□□ -0.43
CAPN1-213ENST00000527897 OR2S2Q9NQN1 319 aa12.37□□□□□ -0.43
CAPN1-213ENST00000527897 RAB26Q9ULW5 256 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms