RNA–Protein interactions for RNA: ENST00000527586.1

VPS26B-204, Transcript of VPS26, retromer complex component B, humanhuman

TSL 3

Gene VPS26B, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-204ENST00000527586 SORT1Q99523 831 aa4.81□□□□□ -1.64
VPS26B-204ENST00000527586 CADM1Q9BY67 442 aaKnown RBP4.81□□□□□ -1.64
VPS26B-204ENST00000527586 EXOSC4Q9NPD3 245 aaKnown RBP4.81□□□□□ -1.64
VPS26B-204ENST00000527586 RBFOX1Q9NWB1 397 aaKnown RBP4.81□□□□□ -1.64
VPS26B-204ENST00000527586 SLC25A37Q9NYZ2 338 aa4.81□□□□□ -1.64
VPS26B-204ENST00000527586 RHCGQ9UBD6 479 aa4.81□□□□□ -1.64
VPS26B-204ENST00000527586 TAGLN3Q9UI15 199 aa4.81□□□□□ -1.64
VPS26B-204ENST00000527586 UTP11Q9Y3A2 253 aaKnown RBP4.81□□□□□ -1.64
VPS26B-204ENST00000527586 MEIKINA0A087WXM9 373 aa4.8□□□□□ -1.64
VPS26B-204ENST00000527586 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.8□□□□□ -1.64
VPS26B-204ENST00000527586 FAM230AA0A1W2PPH8 454 aa4.8□□□□□ -1.64
VPS26B-204ENST00000527586 ERICH4A6NGS2 130 aa4.8□□□□□ -1.64
VPS26B-204ENST00000527586 OR4C46A6NHA9 309 aa4.8□□□□□ -1.64
VPS26B-204ENST00000527586 SH2D1BO14796 132 aa4.8□□□□□ -1.64
VPS26B-204ENST00000527586 SLC31A2O15432 143 aa4.8□□□□□ -1.64
VPS26B-204ENST00000527586 GGCTO75223 188 aaKnown RBP4.8□□□□□ -1.64
VPS26B-204ENST00000527586 CSN2P05814 226 aa4.8□□□□□ -1.64
VPS26B-204ENST00000527586 T-ENOLP0DO92 83 aa4.8□□□□□ -1.64
VPS26B-204ENST00000527586 HIST1H1CP16403 213 aaKnown RBP4.8□□□□□ -1.64
VPS26B-204ENST00000527586 PRKACAP17612 351 aa4.8□□□□□ -1.64
VPS26B-204ENST00000527586 SCN1BQ07699 218 aa4.8□□□□□ -1.64
VPS26B-204ENST00000527586 LIPKQ5VXJ0 399 aa4.8□□□□□ -1.64
VPS26B-204ENST00000527586 TBPL2Q6SJ96 375 aa4.8□□□□□ -1.64
VPS26B-204ENST00000527586 MSANTD1Q6ZTZ1 278 aa4.8□□□□□ -1.64
VPS26B-204ENST00000527586 SLC25A26Q70HW3 274 aa4.8□□□□□ -1.64
VPS26B-204ENST00000527586 TMEM179BQ7Z7N9 219 aa4.8□□□□□ -1.64
VPS26B-204ENST00000527586 COMMD2Q86X83 199 aa4.8□□□□□ -1.64
VPS26B-204ENST00000527586 GPHB5Q86YW7 130 aa4.8□□□□□ -1.64
VPS26B-204ENST00000527586 MSRB3Q8IXL7 192 aa4.8□□□□□ -1.64
VPS26B-204ENST00000527586 FAM58AQ8N1B3 248 aa4.8□□□□□ -1.64
VPS26B-204ENST00000527586 SLC35F6Q8N357 371 aa4.8□□□□□ -1.64
VPS26B-204ENST00000527586 ADAD2Q8NCV1 583 aaKnown RBP4.8□□□□□ -1.64
VPS26B-204ENST00000527586 MNS1Q8NEH6 495 aa4.8□□□□□ -1.64
VPS26B-204ENST00000527586 PROKR2Q8NFJ6 384 aa4.8□□□□□ -1.64
VPS26B-204ENST00000527586 BBS1Q8NFJ9 593 aa4.8□□□□□ -1.64
VPS26B-204ENST00000527586 ZNRF4Q8WWF5 429 aa4.8□□□□□ -1.64
VPS26B-204ENST00000527586 CHST5Q9GZS9 411 aa4.8□□□□□ -1.64
VPS26B-204ENST00000527586 PBOV1Q9GZY1 135 aa4.8□□□□□ -1.64
VPS26B-204ENST00000527586 C5orf66Q9H5L9 145 aa4.8□□□□□ -1.64
VPS26B-204ENST00000527586 ZNF586Q9NXT0 402 aa4.8□□□□□ -1.64
VPS26B-204ENST00000527586 COA4Q9NYJ1 87 aa4.8□□□□□ -1.64
VPS26B-204ENST00000527586 ZNF230Q9UIE0 474 aaPredicted RBP4.8□□□□□ -1.64
VPS26B-204ENST00000527586 TBC1D24Q9ULP9 559 aa4.8□□□□□ -1.64
VPS26B-204ENST00000527586 GSTK1Q9Y2Q3 226 aa4.8□□□□□ -1.64
VPS26B-204ENST00000527586 A0A087WUU8 490 aa4.79□□□□□ -1.64
VPS26B-204ENST00000527586 A0A087WUV0 522 aaPredicted RBP4.79□□□□□ -1.64
VPS26B-204ENST00000527586 IGLV5-52A0A0A0MRZ9 124 aa4.79□□□□□ -1.64
VPS26B-204ENST00000527586 A8MWP6 167 aa4.79□□□□□ -1.64
VPS26B-204ENST00000527586 IDH3BO43837 385 aa4.79□□□□□ -1.64
VPS26B-204ENST00000527586 TUSC2O75896 110 aa4.79□□□□□ -1.64
VPS26B-204ENST00000527586 CA2P00918 260 aa4.79□□□□□ -1.64
VPS26B-204ENST00000527586 GIG44P09565 113 aaPredicted RBP4.79□□□□□ -1.64
VPS26B-204ENST00000527586 H2BFMP0C1H6 154 aa4.79□□□□□ -1.64
VPS26B-204ENST00000527586 SPART-AS1P0CW21 52 aa4.79□□□□□ -1.64
VPS26B-204ENST00000527586 ZNF44P15621 663 aa4.79□□□□□ -1.64
VPS26B-204ENST00000527586 TCP1P17987 556 aaKnown RBP4.79□□□□□ -1.64
VPS26B-204ENST00000527586 LGALS7P47929 136 aa4.79□□□□□ -1.64
VPS26B-204ENST00000527586 ZNF137PP52743 207 aa4.79□□□□□ -1.64
VPS26B-204ENST00000527586 ATP5G2Q06055 141 aa4.79□□□□□ -1.64
VPS26B-204ENST00000527586 FXYD3Q14802 87 aa4.79□□□□□ -1.64
VPS26B-204ENST00000527586 SPIN3Q5JUX0 258 aa4.79□□□□□ -1.64
VPS26B-204ENST00000527586 CLVS2Q5SYC1 327 aa4.79□□□□□ -1.64
VPS26B-204ENST00000527586 ATAD3CQ5T2N8 411 aa4.79□□□□□ -1.64
VPS26B-204ENST00000527586 CFAP161Q6P656 301 aa4.79□□□□□ -1.64
VPS26B-204ENST00000527586 HACD2Q6Y1H2 254 aa4.79□□□□□ -1.64
VPS26B-204ENST00000527586 ZNF497Q6ZNH5 498 aa4.79□□□□□ -1.64
VPS26B-204ENST00000527586 FAM86B1Q8N7N1 296 aa4.79□□□□□ -1.64
VPS26B-204ENST00000527586 NKAIN3Q8N8D7 197 aa4.79□□□□□ -1.64
VPS26B-204ENST00000527586 C8orf31Q8N9H6 132 aa4.79□□□□□ -1.64
VPS26B-204ENST00000527586 OR51L1Q8NGJ5 315 aa4.79□□□□□ -1.64
VPS26B-204ENST00000527586 MZB1Q8WU39 189 aa4.79□□□□□ -1.64
VPS26B-204ENST00000527586 RNF133Q8WVZ7 376 aa4.79□□□□□ -1.64
VPS26B-204ENST00000527586 GIMAP1Q8WWP7 306 aa4.79□□□□□ -1.64
VPS26B-204ENST00000527586 DCAF13Q9NV06 445 aaKnown RBP4.79□□□□□ -1.64
VPS26B-204ENST00000527586 KIF25Q9UIL4 384 aa4.79□□□□□ -1.64
VPS26B-204ENST00000527586 RABL2BQ9UNT1 228 aa4.79□□□□□ -1.64
VPS26B-204ENST00000527586 DMRT1Q9Y5R6 373 aa4.79□□□□□ -1.64
VPS26B-204ENST00000527586 IGHV3-43A0A0B4J1X8 118 aa4.78□□□□□ -1.64
VPS26B-204ENST00000527586 TRAV39A0A0B4J263 110 aa4.78□□□□□ -1.64
VPS26B-204ENST00000527586 RPS10-NUDT3A0A1W2PQS6 291 aa4.78□□□□□ -1.64
VPS26B-204ENST00000527586 SDCBPO00560 298 aaPredicted RBP4.78□□□□□ -1.64
VPS26B-204ENST00000527586 DYNC1I1O14576 645 aa4.78□□□□□ -1.64
VPS26B-204ENST00000527586 COPEO14579 308 aa4.78□□□□□ -1.64
VPS26B-204ENST00000527586 LANCL1O43813 399 aa4.78□□□□□ -1.64
VPS26B-204ENST00000527586 MRPS14O60783 128 aaKnown RBP4.78□□□□□ -1.64
VPS26B-204ENST00000527586 NUDT3O95989 172 aa4.78□□□□□ -1.64
VPS26B-204ENST00000527586 C8orf88P0DMB2 117 aa4.78□□□□□ -1.64
VPS26B-204ENST00000527586 IGHV3-43DP0DP04 118 aa4.78□□□□□ -1.64
VPS26B-204ENST00000527586 ATP6V1B1P15313 513 aa4.78□□□□□ -1.64
VPS26B-204ENST00000527586 BCL3P20749 454 aa4.78□□□□□ -1.64
VPS26B-204ENST00000527586 PPIBP23284 216 aaKnown RBP4.78□□□□□ -1.64
VPS26B-204ENST00000527586 GSTT1P30711 240 aa4.78□□□□□ -1.64
VPS26B-204ENST00000527586 OPRL1P41146 370 aa4.78□□□□□ -1.64
VPS26B-204ENST00000527586 HNRNPA3P51991 378 aaKnown RBP4.78□□□□□ -1.64
VPS26B-204ENST00000527586 FXYD6P3P58550 94 aa4.78□□□□□ -1.64
VPS26B-204ENST00000527586 KLF10Q13118 480 aa4.78□□□□□ -1.64
VPS26B-204ENST00000527586 FAM106AQ4KMX7 169 aa4.78□□□□□ -1.64
VPS26B-204ENST00000527586 TEX30Q5JUR7 227 aa4.78□□□□□ -1.64
VPS26B-204ENST00000527586 OR4A47Q6IF82 309 aa4.78□□□□□ -1.64
VPS26B-204ENST00000527586 OGFOD2Q6N063 350 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms