RNA–Protein interactions for RNA: ENST00000527027.1

PTPRU-210, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 3

Gene PTPRU, Length 619 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-210ENST00000527027 LYL1P12980 280 aa12.54□□□□□ -0.4
PTPRU-210ENST00000527027 KIAA0141Q14154 515 aaPredicted RBP12.54□□□□□ -0.4
PTPRU-210ENST00000527027 GALEQ14376 348 aa12.54□□□□□ -0.4
PTPRU-210ENST00000527027 Q3ZCU0 254 aa12.54□□□□□ -0.4
PTPRU-210ENST00000527027 NHLRC3Q5JS37 347 aa12.54□□□□□ -0.4
PTPRU-210ENST00000527027 FAM27D1Q5T7N8 215 aa12.54□□□□□ -0.4
PTPRU-210ENST00000527027 ZNF529Q6P280 563 aa12.54□□□□□ -0.4
PTPRU-210ENST00000527027 LHFPL3Q86UP9 236 aa12.54□□□□□ -0.4
PTPRU-210ENST00000527027 ZNF429Q86V71 674 aa12.54□□□□□ -0.4
PTPRU-210ENST00000527027 SYS1Q8N2H4 156 aa12.54□□□□□ -0.4
PTPRU-210ENST00000527027 OR5AK2Q8NH90 309 aa12.54□□□□□ -0.4
PTPRU-210ENST00000527027 UBALD1Q8TB05 177 aa12.54□□□□□ -0.4
PTPRU-210ENST00000527027 TSEN15Q8WW01 171 aaKnown RBP12.54□□□□□ -0.4
PTPRU-210ENST00000527027 UBE2E2Q96LR5 201 aa12.54□□□□□ -0.4
PTPRU-210ENST00000527027 PDCD1LG2Q9BQ51 273 aa12.54□□□□□ -0.4
PTPRU-210ENST00000527027 ALG8Q9BVK2 526 aa12.54□□□□□ -0.4
PTPRU-210ENST00000527027 FAM192AQ9GZU8 254 aa12.54□□□□□ -0.4
PTPRU-210ENST00000527027 ISG20L2Q9H9L3 353 aaKnown RBP12.54□□□□□ -0.4
PTPRU-210ENST00000527027 SMPD3Q9NY59 655 aaPredicted RBP12.54□□□□□ -0.4
PTPRU-210ENST00000527027 NKX1-2Q9UD57 310 aaPredicted RBP12.54□□□□□ -0.4
PTPRU-210ENST00000527027 SORL1Q92673 2214 aa12.54□□□□□ -0.4
PTPRU-210ENST00000527027 IGHV3-43A0A0B4J1X8 118 aa12.53□□□□□ -0.4
PTPRU-210ENST00000527027 SNTNA6NMZ2 147 aa12.53□□□□□ -0.4
PTPRU-210ENST00000527027 I3L521 148 aa12.53□□□□□ -0.4
PTPRU-210ENST00000527027 TXNL1O43396 289 aa12.53□□□□□ -0.4
PTPRU-210ENST00000527027 IGHV3-43DP0DP04 118 aa12.53□□□□□ -0.4
PTPRU-210ENST00000527027 VHLP40337 213 aa12.53□□□□□ -0.4
PTPRU-210ENST00000527027 HSPA13P48723 471 aa12.53□□□□□ -0.4
PTPRU-210ENST00000527027 RUNX1Q01196 453 aa12.53□□□□□ -0.4
PTPRU-210ENST00000527027 ZNF616Q08AN1 781 aa12.53□□□□□ -0.4
PTPRU-210ENST00000527027 FAM53AQ6NSI3 398 aaPredicted RBP12.53□□□□□ -0.4
PTPRU-210ENST00000527027 TMEM65Q6PI78 240 aa12.53□□□□□ -0.4
PTPRU-210ENST00000527027 SLC25A48Q6ZT89 311 aaKnown RBP12.53□□□□□ -0.4
PTPRU-210ENST00000527027 ZNF491Q8N8L2 437 aa12.53□□□□□ -0.4
PTPRU-210ENST00000527027 ZNF555Q8NEP9 628 aa12.53□□□□□ -0.4
PTPRU-210ENST00000527027 OR51A2Q8NGJ7 313 aa12.53□□□□□ -0.4
PTPRU-210ENST00000527027 CCDC107Q8WV48 283 aa12.53□□□□□ -0.4
PTPRU-210ENST00000527027 LGALS12Q96DT0 336 aa12.53□□□□□ -0.4
PTPRU-210ENST00000527027 KLK15Q9H2R5 256 aa12.53□□□□□ -0.4
PTPRU-210ENST00000527027 GNB4Q9HAV0 340 aa12.53□□□□□ -0.4
PTPRU-210ENST00000527027 VSIG4Q9Y279 399 aa12.53□□□□□ -0.4
PTPRU-210ENST00000527027 E9PI62 339 aa12.52□□□□□ -0.41
PTPRU-210ENST00000527027 CDRT1O95170 752 aa12.52□□□□□ -0.41
PTPRU-210ENST00000527027 MT-ND4P03905 459 aa12.52□□□□□ -0.41
PTPRU-210ENST00000527027 PPIFP30405 207 aaKnown RBP12.52□□□□□ -0.41
PTPRU-210ENST00000527027 ZNF137PP52743 207 aa12.52□□□□□ -0.41
PTPRU-210ENST00000527027 RBM11P57052 281 aaKnown RBP12.52□□□□□ -0.41
PTPRU-210ENST00000527027 MRPL28Q13084 256 aaKnown RBP12.52□□□□□ -0.41
PTPRU-210ENST00000527027 LRRC36Q1X8D7 754 aa12.52□□□□□ -0.41
PTPRU-210ENST00000527027 ASPHD1Q5U4P2 390 aa12.52□□□□□ -0.41
PTPRU-210ENST00000527027 OR52N1Q8NH53 320 aa12.52□□□□□ -0.41
PTPRU-210ENST00000527027 RBMXL1Q96E39 390 aaKnown RBP12.52□□□□□ -0.41
PTPRU-210ENST00000527027 METTL9Q9H1A3 318 aa12.52□□□□□ -0.41
PTPRU-210ENST00000527027 CHCHD3Q9NX63 227 aaKnown RBP12.52□□□□□ -0.41
PTPRU-210ENST00000527027 IL36GQ9NZH8 169 aa12.52□□□□□ -0.41
PTPRU-210ENST00000527027 ZNF107Q9UII5 783 aaPredicted RBP12.52□□□□□ -0.41
PTPRU-210ENST00000527027 ING4Q9UNL4 249 aa12.52□□□□□ -0.41
PTPRU-210ENST00000527027 GEMIN2O14893 280 aaKnown RBP12.51□□□□□ -0.41
PTPRU-210ENST00000527027 SLC31A2O15432 143 aa12.51□□□□□ -0.41
PTPRU-210ENST00000527027 CSTBP04080 98 aaKnown RBP12.51□□□□□ -0.41
PTPRU-210ENST00000527027 SOX2P48431 317 aa12.51□□□□□ -0.41
PTPRU-210ENST00000527027 ATAD3CQ5T2N8 411 aa12.51□□□□□ -0.41
PTPRU-210ENST00000527027 TTC23Q5W5X9 447 aa12.51□□□□□ -0.41
PTPRU-210ENST00000527027 ZNF497Q6ZNH5 498 aa12.51□□□□□ -0.41
PTPRU-210ENST00000527027 OVCH2Q7RTZ1 564 aa12.51□□□□□ -0.41
PTPRU-210ENST00000527027 LINC00596Q86U02 117 aa12.51□□□□□ -0.41
PTPRU-210ENST00000527027 NEK7Q8TDX7 302 aa12.51□□□□□ -0.41
PTPRU-210ENST00000527027 SLC29A1Q99808 456 aa12.51□□□□□ -0.41
PTPRU-210ENST00000527027 ZMAT4Q9H898 229 aa12.51□□□□□ -0.41
PTPRU-210ENST00000527027 PALMDQ9NP74 551 aa12.51□□□□□ -0.41
PTPRU-210ENST00000527027 TAS2R4Q9NYW5 299 aa12.51□□□□□ -0.41
PTPRU-210ENST00000527027 WSB1Q9Y6I7 421 aa12.51□□□□□ -0.41
PTPRU-210ENST00000527027 OVOL1O14753 267 aa12.5□□□□□ -0.41
PTPRU-210ENST00000527027 IGLV1-40P01703 118 aa12.5□□□□□ -0.41
PTPRU-210ENST00000527027 FRMD6-AS1P0C7T7 363 aa12.5□□□□□ -0.41
PTPRU-210ENST00000527027 SLC2A2P11168 524 aaPredicted RBP12.5□□□□□ -0.41
PTPRU-210ENST00000527027 ZNF134P52741 427 aa12.5□□□□□ -0.41
PTPRU-210ENST00000527027 GBX2P52951 348 aaPredicted RBP12.5□□□□□ -0.41
PTPRU-210ENST00000527027 GNB1P62873 340 aa12.5□□□□□ -0.41
PTPRU-210ENST00000527027 MPV17LQ2QL34 196 aa12.5□□□□□ -0.41
PTPRU-210ENST00000527027 CT45A1Q5HYN5 189 aa12.5□□□□□ -0.41
PTPRU-210ENST00000527027 STEAP3Q658P3 488 aa12.5□□□□□ -0.41
PTPRU-210ENST00000527027 ZNF439Q8NDP4 499 aa12.5□□□□□ -0.41
PTPRU-210ENST00000527027 CT45A3Q8NHU0 189 aa12.5□□□□□ -0.41
PTPRU-210ENST00000527027 DCUN1D4Q92564 292 aa12.5□□□□□ -0.41
PTPRU-210ENST00000527027 OR5B12Q96R08 314 aa12.5□□□□□ -0.41
PTPRU-210ENST00000527027 JAM3Q9BX67 310 aa12.5□□□□□ -0.41
PTPRU-210ENST00000527027 RAB9BQ9NP90 201 aa12.5□□□□□ -0.41
PTPRU-210ENST00000527027 PAK1IP1Q9NWT1 392 aaPredicted RBP12.5□□□□□ -0.41
PTPRU-210ENST00000527027 ERVK13-1Q9NX77 482 aa12.5□□□□□ -0.41
PTPRU-210ENST00000527027 GNG12Q9UBI6 72 aa12.5□□□□□ -0.41
PTPRU-210ENST00000527027 AASSQ9UDR5 926 aa12.5□□□□□ -0.41
PTPRU-210ENST00000527027 LCE6AA0A183 80 aa12.49□□□□□ -0.41
PTPRU-210ENST00000527027 FAM90A10PA6NDY2 464 aa12.49□□□□□ -0.41
PTPRU-210ENST00000527027 C12orf77C9JDV5 145 aa12.49□□□□□ -0.41
PTPRU-210ENST00000527027 G3V318 75 aa12.49□□□□□ -0.41
PTPRU-210ENST00000527027 AIPO00170 330 aa12.49□□□□□ -0.41
PTPRU-210ENST00000527027 SPINT2O43291 252 aa12.49□□□□□ -0.41
PTPRU-210ENST00000527027 FADS2O95864 444 aaKnown RBP12.49□□□□□ -0.41
PTPRU-210ENST00000527027 CD2P06729 351 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms