RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 RAB9BQ9NP90 201 aa2.56□□□□□ -2
VPS13B-209ENST00000521559 MYOZ1Q9NP98 299 aaPredicted RBP2.56□□□□□ -2
VPS13B-209ENST00000521559 IL19Q9UHD0 177 aa2.56□□□□□ -2
VPS13B-209ENST00000521559 ENPP5Q9UJA9 477 aa2.56□□□□□ -2
VPS13B-209ENST00000521559 SLC7A11Q9UPY5 501 aa2.56□□□□□ -2
VPS13B-209ENST00000521559 PIGLQ9Y2B2 252 aa2.56□□□□□ -2
VPS13B-209ENST00000521559 ATMQ13315 3056 aa2.56□□□□□ -2
VPS13B-209ENST00000521559 MED12LQ86YW9 2145 aa2.56□□□□□ -2
VPS13B-209ENST00000521559 ALPK2Q86TB3 2170 aa2.56□□□□□ -2
VPS13B-209ENST00000521559 HIVEP3Q5T1R4 2406 aa2.56□□□□□ -2
VPS13B-209ENST00000521559 TRAV18A0A075B6X5 111 aa2.55□□□□□ -2
VPS13B-209ENST00000521559 LOC105371242A0A075B767 164 aa2.55□□□□□ -2
VPS13B-209ENST00000521559 IGKV1-9A0A0C4DH69 117 aa2.55□□□□□ -2
VPS13B-209ENST00000521559 PNMA8CA0A1B0GUJ8 204 aa2.55□□□□□ -2
VPS13B-209ENST00000521559 TRDV1A0A1B0GX56 115 aa2.55□□□□□ -2
VPS13B-209ENST00000521559 PQLC2LA1A4F0 135 aa2.55□□□□□ -2
VPS13B-209ENST00000521559 LRP5LA4QPB2 252 aa2.55□□□□□ -2
VPS13B-209ENST00000521559 TRIM64BA6NI03 449 aa2.55□□□□□ -2
VPS13B-209ENST00000521559 A6NIN4 97 aa2.55□□□□□ -2
VPS13B-209ENST00000521559 OR5B21A6NL26 309 aa2.55□□□□□ -2
VPS13B-209ENST00000521559 TMEM210A6NLX4 147 aa2.55□□□□□ -2
VPS13B-209ENST00000521559 LRRC30A6NM36 301 aa2.55□□□□□ -2
VPS13B-209ENST00000521559 EPM2AB3EWF7 344 aa2.55□□□□□ -2
VPS13B-209ENST00000521559 ZNF879B4DU55 563 aa2.55□□□□□ -2
VPS13B-209ENST00000521559 ZNF732B4DXR9 585 aa2.55□□□□□ -2
VPS13B-209ENST00000521559 H3BSH0 61 aa2.55□□□□□ -2
VPS13B-209ENST00000521559 CCL24O00175 119 aa2.55□□□□□ -2
VPS13B-209ENST00000521559 PIN1P1O15428 100 aa2.55□□□□□ -2
VPS13B-209ENST00000521559 RP2O75695 350 aa2.55□□□□□ -2
VPS13B-209ENST00000521559 GATBO75879 557 aaKnown RBP2.55□□□□□ -2
VPS13B-209ENST00000521559 LY6HO94772 140 aa2.55□□□□□ -2
VPS13B-209ENST00000521559 FSTL3O95633 263 aa2.55□□□□□ -2
VPS13B-209ENST00000521559 LHBP01229 141 aa2.55□□□□□ -2
VPS13B-209ENST00000521559 ALDOBP05062 364 aa2.55□□□□□ -2
VPS13B-209ENST00000521559 CD2P06729 351 aa2.55□□□□□ -2
VPS13B-209ENST00000521559 CSF3P09919 207 aa2.55□□□□□ -2
VPS13B-209ENST00000521559 OCM2P0CE71 109 aa2.55□□□□□ -2
VPS13B-209ENST00000521559 IGFBP3P17936 291 aaPredicted RBP2.55□□□□□ -2
VPS13B-209ENST00000521559 RAB3AP20336 220 aa2.55□□□□□ -2
VPS13B-209ENST00000521559 GALP22466 123 aa2.55□□□□□ -2
VPS13B-209ENST00000521559 PSMA1P25786 263 aaKnown RBP2.55□□□□□ -2
VPS13B-209ENST00000521559 GIFP27352 417 aa2.55□□□□□ -2
VPS13B-209ENST00000521559 PSMB9P28065 219 aa2.55□□□□□ -2
VPS13B-209ENST00000521559 CFHR2P36980 270 aa2.55□□□□□ -2
VPS13B-209ENST00000521559 TGFBR2P37173 567 aa2.55□□□□□ -2
VPS13B-209ENST00000521559 OR3A3P47888 321 aa2.55□□□□□ -2
VPS13B-209ENST00000521559 PPP3R1P63098 170 aa2.55□□□□□ -2
VPS13B-209ENST00000521559 GNG3P63215 75 aa2.55□□□□□ -2
VPS13B-209ENST00000521559 CCL8P80075 99 aa2.55□□□□□ -2
VPS13B-209ENST00000521559 PAX8Q06710 450 aa2.55□□□□□ -2
VPS13B-209ENST00000521559 MAB21L1Q13394 359 aa2.55□□□□□ -2
VPS13B-209ENST00000521559 TRAM1Q15629 374 aa2.55□□□□□ -2
VPS13B-209ENST00000521559 MPPED2Q15777 294 aa2.55□□□□□ -2
VPS13B-209ENST00000521559 UBE2V2Q15819 145 aa2.55□□□□□ -2
VPS13B-209ENST00000521559 SSX1Q16384 188 aa2.55□□□□□ -2
VPS13B-209ENST00000521559 CLEC12BQ2HXU8 276 aa2.55□□□□□ -2
VPS13B-209ENST00000521559 ZNF181Q2M3W8 571 aa2.55□□□□□ -2
VPS13B-209ENST00000521559 HFEQ30201 348 aa2.55□□□□□ -2
VPS13B-209ENST00000521559 Q499Y3 187 aa2.55□□□□□ -2
VPS13B-209ENST00000521559 ACSM3Q53FZ2 586 aa2.55□□□□□ -2
VPS13B-209ENST00000521559 DMRTC1Q5HYR2 192 aa2.55□□□□□ -2
VPS13B-209ENST00000521559 LIPKQ5VXJ0 399 aa2.55□□□□□ -2
VPS13B-209ENST00000521559 PLCXD3Q63HM9 321 aa2.55□□□□□ -2
VPS13B-209ENST00000521559 CLEC2AQ6UVW9 174 aa2.55□□□□□ -2
VPS13B-209ENST00000521559 TMEM91Q6ZNR0 172 aa2.55□□□□□ -2
VPS13B-209ENST00000521559 DNM1P46Q6ZS02 220 aa2.55□□□□□ -2
VPS13B-209ENST00000521559 KCTD9Q7L273 389 aa2.55□□□□□ -2
VPS13B-209ENST00000521559 GPR141Q7Z602 305 aa2.55□□□□□ -2
VPS13B-209ENST00000521559 CEACAM19Q7Z692 300 aa2.55□□□□□ -2
VPS13B-209ENST00000521559 WDR86Q86TI4 376 aa2.55□□□□□ -2
VPS13B-209ENST00000521559 ZNF573Q86YE8 665 aa2.55□□□□□ -2
VPS13B-209ENST00000521559 CDH26Q8IXH8 852 aa2.55□□□□□ -2
VPS13B-209ENST00000521559 PHC2Q8IXK0 858 aa2.55□□□□□ -2
VPS13B-209ENST00000521559 C11orf53Q8IXP5 236 aa2.55□□□□□ -2
VPS13B-209ENST00000521559 CFAP46Q8IYW2 2715 aa2.55□□□□□ -2
VPS13B-209ENST00000521559 ZNF525Q8N782 197 aa2.55□□□□□ -2
VPS13B-209ENST00000521559 OR1M1Q8NGA1 313 aa2.55□□□□□ -2
VPS13B-209ENST00000521559 OR10AD1Q8NGE0 317 aa2.55□□□□□ -2
VPS13B-209ENST00000521559 OR51A4Q8NGJ6 313 aa2.55□□□□□ -2
VPS13B-209ENST00000521559 OR13C5Q8NGS8 318 aa2.55□□□□□ -2
VPS13B-209ENST00000521559 OR11L1Q8NGX0 322 aa2.55□□□□□ -2
VPS13B-209ENST00000521559 ZNF671Q8TAW3 534 aa2.55□□□□□ -2
VPS13B-209ENST00000521559 C10orf105Q8TEF2 133 aa2.55□□□□□ -2
VPS13B-209ENST00000521559 TSEN15Q8WW01 171 aaKnown RBP2.55□□□□□ -2
VPS13B-209ENST00000521559 PP6455Q8WZ26 134 aa2.55□□□□□ -2
VPS13B-209ENST00000521559 CCL17Q92583 94 aa2.55□□□□□ -2
VPS13B-209ENST00000521559 THRSPQ92748 146 aa2.55□□□□□ -2
VPS13B-209ENST00000521559 RPL3LQ92901 407 aaKnown RBP2.55□□□□□ -2
VPS13B-209ENST00000521559 YIPF5Q969M3 257 aa2.55□□□□□ -2
VPS13B-209ENST00000521559 TMEM203Q969S6 136 aa2.55□□□□□ -2
VPS13B-209ENST00000521559 TMEM106AQ96A25 262 aa2.55□□□□□ -2
VPS13B-209ENST00000521559 ZNF486Q96H40 463 aaPredicted RBP2.55□□□□□ -2
VPS13B-209ENST00000521559 TECTBQ96PL2 329 aa2.55□□□□□ -2
VPS13B-209ENST00000521559 DERL3Q96Q80 235 aa2.55□□□□□ -2
VPS13B-209ENST00000521559 OR2V2Q96R30 315 aa2.55□□□□□ -2
VPS13B-209ENST00000521559 ATG101Q9BSB4 218 aa2.55□□□□□ -2
VPS13B-209ENST00000521559 ADAT1Q9BUB4 502 aaKnown RBP2.55□□□□□ -2
VPS13B-209ENST00000521559 TMED9Q9BVK6 235 aa2.55□□□□□ -2
VPS13B-209ENST00000521559 RTL8AQ9BWD3 113 aa2.55□□□□□ -2
VPS13B-209ENST00000521559 CHST5Q9GZS9 411 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms