RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 RCC1P18754 421 aaPredicted RBP16.59■□□□□ 0.25
TRIM35-203ENST00000521253 GALP22466 123 aa16.59■□□□□ 0.25
TRIM35-203ENST00000521253 PSMD7P51665 324 aa16.59■□□□□ 0.25
TRIM35-203ENST00000521253 LOXL3P58215 753 aa16.59■□□□□ 0.25
TRIM35-203ENST00000521253 KRTAP10-3P60369 221 aa16.59■□□□□ 0.25
TRIM35-203ENST00000521253 C6orf183Q5T699 404 aa16.59■□□□□ 0.25
TRIM35-203ENST00000521253 FAM53AQ6NSI3 398 aaPredicted RBP16.59■□□□□ 0.25
TRIM35-203ENST00000521253 C6orf201Q7Z4U5 140 aa16.59■□□□□ 0.25
TRIM35-203ENST00000521253 OR51D1Q8NGF3 324 aa16.59■□□□□ 0.25
TRIM35-203ENST00000521253 OR52M1Q8NGK5 317 aa16.59■□□□□ 0.25
TRIM35-203ENST00000521253 LPAR5Q9H1C0 372 aa16.59■□□□□ 0.25
TRIM35-203ENST00000521253 RANBP3Q9H6Z4 567 aaPredicted RBP16.59■□□□□ 0.25
TRIM35-203ENST00000521253 GFOD1Q9NXC2 390 aa16.59■□□□□ 0.25
TRIM35-203ENST00000521253 FBLN5Q9UBX5 448 aa16.59■□□□□ 0.25
TRIM35-203ENST00000521253 SIGLEC9Q9Y336 463 aa16.59■□□□□ 0.25
TRIM35-203ENST00000521253 AMMECR1Q9Y4X0 333 aaPredicted RBP16.59■□□□□ 0.25
TRIM35-203ENST00000521253 IGHV3-43A0A0B4J1X8 118 aa16.58■□□□□ 0.24
TRIM35-203ENST00000521253 A0A1W2PPE3 182 aa16.58■□□□□ 0.24
TRIM35-203ENST00000521253 IGHV3-43DP0DP04 118 aa16.58■□□□□ 0.24
TRIM35-203ENST00000521253 CD24P25063 80 aa16.58■□□□□ 0.24
TRIM35-203ENST00000521253 BRS3P32247 399 aa16.58■□□□□ 0.24
TRIM35-203ENST00000521253 KIR2DS4P43632 304 aa16.58■□□□□ 0.24
TRIM35-203ENST00000521253 ARHGDIBP52566 201 aa16.58■□□□□ 0.24
TRIM35-203ENST00000521253 KCTD21Q4G0X4 260 aa16.58■□□□□ 0.24
TRIM35-203ENST00000521253 C22orf42Q6IC83 251 aa16.58■□□□□ 0.24
TRIM35-203ENST00000521253 OR1L1Q8NH94 360 aa16.58■□□□□ 0.24
TRIM35-203ENST00000521253 MRPL30Q8TCC3 161 aaKnown RBP16.58■□□□□ 0.24
TRIM35-203ENST00000521253 FAM3DQ96BQ1 224 aa16.58■□□□□ 0.24
TRIM35-203ENST00000521253 FAAP24Q9BTP7 215 aa16.58■□□□□ 0.24
TRIM35-203ENST00000521253 OOSP1A8MZH6 123 aa16.57■□□□□ 0.24
TRIM35-203ENST00000521253 PDCD5O14737 125 aa16.57■□□□□ 0.24
TRIM35-203ENST00000521253 SPINT2O43291 252 aa16.57■□□□□ 0.24
TRIM35-203ENST00000521253 HBZP02008 142 aa16.57■□□□□ 0.24
TRIM35-203ENST00000521253 MYL9P24844 172 aa16.57■□□□□ 0.24
TRIM35-203ENST00000521253 BLVRBP30043 206 aaPredicted RBP16.57■□□□□ 0.24
TRIM35-203ENST00000521253 OR10A3P58181 314 aa16.57■□□□□ 0.24
TRIM35-203ENST00000521253 MADCAM1Q13477 382 aa16.57■□□□□ 0.24
TRIM35-203ENST00000521253 C2orf76Q3KRA6 126 aa16.57■□□□□ 0.24
TRIM35-203ENST00000521253 HES5Q5TA89 166 aa16.57■□□□□ 0.24
TRIM35-203ENST00000521253 CCDC144NLQ6NUI1 221 aa16.57■□□□□ 0.24
TRIM35-203ENST00000521253 PRR18Q8N4B5 295 aa16.57■□□□□ 0.24
TRIM35-203ENST00000521253 OR10X1Q8NGY0 326 aa16.57■□□□□ 0.24
TRIM35-203ENST00000521253 TOMM40LQ969M1 308 aa16.57■□□□□ 0.24
TRIM35-203ENST00000521253 RPEQ96AT9 228 aa16.57■□□□□ 0.24
TRIM35-203ENST00000521253 CITED1Q99966 193 aa16.57■□□□□ 0.24
TRIM35-203ENST00000521253 URM1Q9BTM9 101 aaKnown RBP16.57■□□□□ 0.24
TRIM35-203ENST00000521253 TAF9BQ9HBM6 251 aa16.57■□□□□ 0.24
TRIM35-203ENST00000521253 MBNL3Q9NUK0 354 aaKnown RBP16.57■□□□□ 0.24
TRIM35-203ENST00000521253 STEAP1Q9UHE8 339 aa16.57■□□□□ 0.24
TRIM35-203ENST00000521253 MGAM2Q2M2H8 2515 aa16.56■□□□□ 0.24
TRIM35-203ENST00000521253 SOCS1O15524 211 aa16.56■□□□□ 0.24
TRIM35-203ENST00000521253 MNDAP41218 407 aa16.56■□□□□ 0.24
TRIM35-203ENST00000521253 DIAPH2-AS1Q14236 149 aa16.56■□□□□ 0.24
TRIM35-203ENST00000521253 FBLN7Q53RD9 439 aa16.56■□□□□ 0.24
TRIM35-203ENST00000521253 TRAT1Q6PIZ9 186 aa16.56■□□□□ 0.24
TRIM35-203ENST00000521253 FAM89BQ8N5H3 189 aa16.56■□□□□ 0.24
TRIM35-203ENST00000521253 RAB9BQ9NP90 201 aa16.56■□□□□ 0.24
TRIM35-203ENST00000521253 PLEKHJ1Q9NW61 149 aa16.56■□□□□ 0.24
TRIM35-203ENST00000521253 LDLRAD4O15165 306 aa16.55■□□□□ 0.24
TRIM35-203ENST00000521253 EFNB2P52799 333 aa16.55■□□□□ 0.24
TRIM35-203ENST00000521253 PLA2G7Q13093 441 aa16.55■□□□□ 0.24
TRIM35-203ENST00000521253 NEDD8Q15843 81 aa16.55■□□□□ 0.24
TRIM35-203ENST00000521253 C5orf24Q7Z6I8 188 aa16.55■□□□□ 0.24
TRIM35-203ENST00000521253 LINC00311Q8N616 119 aa16.55■□□□□ 0.24
TRIM35-203ENST00000521253 OR2T6Q8NHC8 308 aa16.55■□□□□ 0.24
TRIM35-203ENST00000521253 ZNF702PQ9H963 129 aa16.55■□□□□ 0.24
TRIM35-203ENST00000521253 TXNL4BQ9NX01 149 aaKnown RBP16.55■□□□□ 0.24
TRIM35-203ENST00000521253 KCNIP1Q9NZI2 227 aa16.55■□□□□ 0.24
TRIM35-203ENST00000521253 GNG12Q9UBI6 72 aa16.55■□□□□ 0.24
TRIM35-203ENST00000521253 STUB1Q9UNE7 303 aa16.55■□□□□ 0.24
TRIM35-203ENST00000521253 TMEM272A0A1B0GTI8 110 aa16.54■□□□□ 0.24
TRIM35-203ENST00000521253 A0A1W2PPI3 338 aa16.54■□□□□ 0.24
TRIM35-203ENST00000521253 IFITM5A6NNB3 132 aa16.54■□□□□ 0.24
TRIM35-203ENST00000521253 FOXI3A8MTJ6 420 aaPredicted RBP16.54■□□□□ 0.24
TRIM35-203ENST00000521253 RAB3BP20337 219 aa16.54■□□□□ 0.24
TRIM35-203ENST00000521253 FGF9P31371 208 aaPredicted RBP16.54■□□□□ 0.24
TRIM35-203ENST00000521253 RANBP1P43487 201 aa16.54■□□□□ 0.24
TRIM35-203ENST00000521253 TMEM30BQ3MIR4 351 aa16.54■□□□□ 0.24
TRIM35-203ENST00000521253 ZNF554Q86TJ5 538 aa16.54■□□□□ 0.24
TRIM35-203ENST00000521253 NR2C2APQ86WQ0 139 aa16.54■□□□□ 0.24
TRIM35-203ENST00000521253 C8orf31Q8N9H6 132 aa16.54■□□□□ 0.24
TRIM35-203ENST00000521253 OR10V1Q8NGI7 309 aa16.54■□□□□ 0.24
TRIM35-203ENST00000521253 OCSTAMPQ9BR26 566 aa16.54■□□□□ 0.24
TRIM35-203ENST00000521253 TIMM23O14925 209 aa16.53■□□□□ 0.24
TRIM35-203ENST00000521253 SLC31A2O15432 143 aa16.53■□□□□ 0.24
TRIM35-203ENST00000521253 NAPSAO96009 420 aa16.53■□□□□ 0.24
TRIM35-203ENST00000521253 VEGFCP49767 419 aa16.53■□□□□ 0.24
TRIM35-203ENST00000521253 BLCAPP62952 87 aa16.53■□□□□ 0.24
TRIM35-203ENST00000521253 HABP2Q14520 560 aaPredicted RBP16.53■□□□□ 0.24
TRIM35-203ENST00000521253 Q3ZCU0 254 aa16.53■□□□□ 0.24
TRIM35-203ENST00000521253 PRR31Q5SQ13 230 aa16.53■□□□□ 0.24
TRIM35-203ENST00000521253 Q6ZPA2 131 aa16.53■□□□□ 0.24
TRIM35-203ENST00000521253 Q8N2B8 174 aa16.53■□□□□ 0.24
TRIM35-203ENST00000521253 ZNF439Q8NDP4 499 aa16.53■□□□□ 0.24
TRIM35-203ENST00000521253 OR56B4Q8NH76 319 aa16.53■□□□□ 0.24
TRIM35-203ENST00000521253 OR51E2Q9H255 320 aa16.53■□□□□ 0.24
TRIM35-203ENST00000521253 ZNF696Q9H7X3 374 aa16.53■□□□□ 0.24
TRIM35-203ENST00000521253 SMIM30A4D0T7 59 aa16.52■□□□□ 0.24
TRIM35-203ENST00000521253 FAM90A9PA6NNJ1 464 aa16.52■□□□□ 0.24
TRIM35-203ENST00000521253 HSD17B6O14756 317 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms