RNA–Protein interactions for RNA: ENST00000520451.1

CSMD1-207, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-207ENST00000520451 TRBV5-5A0A0J9YX44 114 aa11.93□□□□□ -0.5
CSMD1-207ENST00000520451 SLC31A2O15432 143 aa11.93□□□□□ -0.5
CSMD1-207ENST00000520451 BAG2O95816 211 aa11.93□□□□□ -0.5
CSMD1-207ENST00000520451 MOSP00540 346 aa11.93□□□□□ -0.5
CSMD1-207ENST00000520451 RPLP1P05386 114 aaKnown RBP11.93□□□□□ -0.5
CSMD1-207ENST00000520451 CD1BP29016 333 aa11.93□□□□□ -0.5
CSMD1-207ENST00000520451 GPR176Q14439 515 aa11.93□□□□□ -0.5
CSMD1-207ENST00000520451 PNLIPRP3Q17RR3 467 aa11.93□□□□□ -0.5
CSMD1-207ENST00000520451 Q499Y3 187 aa11.93□□□□□ -0.5
CSMD1-207ENST00000520451 UNQ9370/PRO34162Q6UXP9 181 aa11.93□□□□□ -0.5
CSMD1-207ENST00000520451 LCNL1Q6ZST4 164 aa11.93□□□□□ -0.5
CSMD1-207ENST00000520451 ZFP41Q8N8Y5 198 aa11.93□□□□□ -0.5
CSMD1-207ENST00000520451 TMEM104Q8NE00 496 aa11.93□□□□□ -0.5
CSMD1-207ENST00000520451 MUL1Q969V5 352 aa11.93□□□□□ -0.5
CSMD1-207ENST00000520451 ST6GALNAC6Q969X2 333 aa11.93□□□□□ -0.5
CSMD1-207ENST00000520451 RAX2Q96IS3 184 aa11.93□□□□□ -0.5
CSMD1-207ENST00000520451 RDH12Q96NR8 316 aa11.93□□□□□ -0.5
CSMD1-207ENST00000520451 RASL11BQ9BPW5 248 aa11.93□□□□□ -0.5
CSMD1-207ENST00000520451 SPACA1Q9HBV2 294 aa11.93□□□□□ -0.5
CSMD1-207ENST00000520451 GNG12Q9UBI6 72 aa11.93□□□□□ -0.5
CSMD1-207ENST00000520451 TRAPPC2LQ9UL33 140 aa11.93□□□□□ -0.5
CSMD1-207ENST00000520451 MRPS28Q9Y2Q9 187 aaKnown RBP11.93□□□□□ -0.5
CSMD1-207ENST00000520451 DNAH9Q9NYC9 4486 aa11.93□□□□□ -0.5
CSMD1-207ENST00000520451 ZNF736B4DX44 427 aaPredicted RBP11.92□□□□□ -0.5
CSMD1-207ENST00000520451 C12orf77C9JDV5 145 aa11.92□□□□□ -0.5
CSMD1-207ENST00000520451 MCRIP1C9JLW8 97 aa11.92□□□□□ -0.5
CSMD1-207ENST00000520451 H0YHG0 523 aa11.92□□□□□ -0.5
CSMD1-207ENST00000520451 CCL24O00175 119 aa11.92□□□□□ -0.5
CSMD1-207ENST00000520451 SPINT2O43291 252 aa11.92□□□□□ -0.5
CSMD1-207ENST00000520451 GPX5O75715 221 aa11.92□□□□□ -0.5
CSMD1-207ENST00000520451 MED21Q13503 144 aa11.92□□□□□ -0.5
CSMD1-207ENST00000520451 GPR50Q13585 617 aa11.92□□□□□ -0.5
CSMD1-207ENST00000520451 Q3ZCU0 254 aa11.92□□□□□ -0.5
CSMD1-207ENST00000520451 YIF1BQ5BJH7 314 aa11.92□□□□□ -0.5
CSMD1-207ENST00000520451 CXorf66Q5JRM2 361 aaPredicted RBP11.92□□□□□ -0.5
CSMD1-207ENST00000520451 SYT6Q5T7P8 510 aaPredicted RBP11.92□□□□□ -0.5
CSMD1-207ENST00000520451 DMKNQ6E0U4 476 aaPredicted RBP11.92□□□□□ -0.5
CSMD1-207ENST00000520451 GLIPR1L1Q6UWM5 242 aa11.92□□□□□ -0.5
CSMD1-207ENST00000520451 SLC25A48Q6ZT89 311 aaKnown RBP11.92□□□□□ -0.5
CSMD1-207ENST00000520451 PRR18Q8N4B5 295 aa11.92□□□□□ -0.5
CSMD1-207ENST00000520451 JAGN1Q8N5M9 183 aa11.92□□□□□ -0.5
CSMD1-207ENST00000520451 OR10V1Q8NGI7 309 aa11.92□□□□□ -0.5
CSMD1-207ENST00000520451 OR4K15Q8NH41 348 aa11.92□□□□□ -0.5
CSMD1-207ENST00000520451 S1PR3Q99500 378 aa11.92□□□□□ -0.5
CSMD1-207ENST00000520451 B9D2Q9BPU9 175 aa11.92□□□□□ -0.5
CSMD1-207ENST00000520451 GON7Q9BXV9 100 aa11.92□□□□□ -0.5
CSMD1-207ENST00000520451 RAB9BQ9NP90 201 aa11.92□□□□□ -0.5
CSMD1-207ENST00000520451 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.92□□□□□ -0.5
CSMD1-207ENST00000520451 PLSCR3Q9NRY6 295 aa11.92□□□□□ -0.5
CSMD1-207ENST00000520451 CHCHD3Q9NX63 227 aaKnown RBP11.92□□□□□ -0.5
CSMD1-207ENST00000520451 ETAA1Q9NY74 926 aa11.92□□□□□ -0.5
CSMD1-207ENST00000520451 RCC2Q9P258 522 aaKnown RBP11.92□□□□□ -0.5
CSMD1-207ENST00000520451 TXNL1O43396 289 aa11.91□□□□□ -0.5
CSMD1-207ENST00000520451 RRP9O43818 475 aaKnown RBP11.91□□□□□ -0.5
CSMD1-207ENST00000520451 FSTP19883 344 aa11.91□□□□□ -0.5
CSMD1-207ENST00000520451 RPS11P62280 158 aaKnown RBP eCLIP11.91□□□□□ -0.5
CSMD1-207ENST00000520451 DGCR2P98153 550 aa11.91□□□□□ -0.5
CSMD1-207ENST00000520451 FOXE3Q13461 319 aa11.91□□□□□ -0.5
CSMD1-207ENST00000520451 DCTN2Q13561 401 aaKnown RBP11.91□□□□□ -0.5
CSMD1-207ENST00000520451 DEFB136Q30KP8 78 aa11.91□□□□□ -0.5
CSMD1-207ENST00000520451 TMEM30BQ3MIR4 351 aa11.91□□□□□ -0.5
CSMD1-207ENST00000520451 C6orf183Q5T699 404 aa11.91□□□□□ -0.5
CSMD1-207ENST00000520451 RAB12Q6IQ22 244 aa11.91□□□□□ -0.5
CSMD1-207ENST00000520451 ZNF439Q8NDP4 499 aa11.91□□□□□ -0.5
CSMD1-207ENST00000520451 OR8H1Q8NGG4 311 aa11.91□□□□□ -0.5
CSMD1-207ENST00000520451 OR8U1Q8NH10 309 aa11.91□□□□□ -0.5
CSMD1-207ENST00000520451 OR1L1Q8NH94 360 aa11.91□□□□□ -0.5
CSMD1-207ENST00000520451 CYGBQ8WWM9 190 aa11.91□□□□□ -0.5
CSMD1-207ENST00000520451 RBMXL1Q96E39 390 aaKnown RBP11.91□□□□□ -0.5
CSMD1-207ENST00000520451 TMEM80Q96HE8 168 aa11.91□□□□□ -0.5
CSMD1-207ENST00000520451 PGLYRP3Q96LB9 341 aa11.91□□□□□ -0.5
CSMD1-207ENST00000520451 OR14A2Q96R54 314 aa11.91□□□□□ -0.5
CSMD1-207ENST00000520451 DCLRE1BQ9H816 532 aa11.91□□□□□ -0.5
CSMD1-207ENST00000520451 ZMAT5Q9UDW3 170 aaKnown RBP11.91□□□□□ -0.5
CSMD1-207ENST00000520451 TRBV5-7A0A0A0MS05 114 aa11.9□□□□□ -0.5
CSMD1-207ENST00000520451 PNMA8CA0A1B0GUJ8 204 aa11.9□□□□□ -0.5
CSMD1-207ENST00000520451 A0A1W2PPK0 400 aa11.9□□□□□ -0.5
CSMD1-207ENST00000520451 HBZP02008 142 aa11.9□□□□□ -0.5
CSMD1-207ENST00000520451 ELANEP08246 267 aa11.9□□□□□ -0.5
CSMD1-207ENST00000520451 ZNF134P52741 427 aa11.9□□□□□ -0.5
CSMD1-207ENST00000520451 ZNF137PP52743 207 aa11.9□□□□□ -0.5
CSMD1-207ENST00000520451 F2RL1P55085 397 aa11.9□□□□□ -0.5
CSMD1-207ENST00000520451 GP2P55259 537 aaKnown RBP11.9□□□□□ -0.5
CSMD1-207ENST00000520451 CT45A1Q5HYN5 189 aa11.9□□□□□ -0.5
CSMD1-207ENST00000520451 AWAT2Q6E213 333 aa11.9□□□□□ -0.5
CSMD1-207ENST00000520451 FAM71E2Q8N5Q1 922 aa11.9□□□□□ -0.5
CSMD1-207ENST00000520451 CT45A3Q8NHU0 189 aa11.9□□□□□ -0.5
CSMD1-207ENST00000520451 TFAP2CQ92754 450 aa11.9□□□□□ -0.5
CSMD1-207ENST00000520451 MRPS24Q96EL2 167 aaKnown RBP11.9□□□□□ -0.5
CSMD1-207ENST00000520451 HSPB9Q9BQS6 159 aa11.9□□□□□ -0.5
CSMD1-207ENST00000520451 SELENOIQ9C0D9 397 aa11.9□□□□□ -0.5
CSMD1-207ENST00000520451 BANF2Q9H503 90 aa11.9□□□□□ -0.5
CSMD1-207ENST00000520451 PEX16Q9Y5Y5 336 aa11.9□□□□□ -0.5
CSMD1-207ENST00000520451 TENM3Q9P273 2699 aa11.9□□□□□ -0.5
CSMD1-207ENST00000520451 CRTAPO75718 401 aaPredicted RBP11.89□□□□□ -0.51
CSMD1-207ENST00000520451 MAS1P04201 325 aa11.89□□□□□ -0.51
CSMD1-207ENST00000520451 MGMTP16455 207 aa11.89□□□□□ -0.51
CSMD1-207ENST00000520451 RCC1P18754 421 aaPredicted RBP11.89□□□□□ -0.51
CSMD1-207ENST00000520451 VDAC1P21796 283 aa11.89□□□□□ -0.51
CSMD1-207ENST00000520451 SOX6P35712 828 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms