RNA–Protein interactions for RNA: ENST00000516665.1

RNU6-539P-201, Transcript of RNA, U6 small nuclear 539, pseudogene, humanhuman

BASIC

Gene RNU6-539P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-539P-201ENST00000516665 INSIG2Q9Y5U4 225 aa-3.24□□□□□ -2.93
RNU6-539P-201ENST00000516665 UNC13CQ8NB66 2214 aa-3.24□□□□□ -2.93
RNU6-539P-201ENST00000516665 LINC01619G3V211 115 aa-3.25□□□□□ -2.93
RNU6-539P-201ENST00000516665 AKR7A2O43488 359 aa-3.25□□□□□ -2.93
RNU6-539P-201ENST00000516665 KLRC4O43908 158 aa-3.25□□□□□ -2.93
RNU6-539P-201ENST00000516665 GABRG2P18507 467 aa-3.25□□□□□ -2.93
RNU6-539P-201ENST00000516665 CCNOP22674 350 aa-3.25□□□□□ -2.93
RNU6-539P-201ENST00000516665 ETV6P41212 452 aa-3.25□□□□□ -2.93
RNU6-539P-201ENST00000516665 FABP6P51161 128 aa-3.25□□□□□ -2.93
RNU6-539P-201ENST00000516665 WFDC2Q14508 124 aa-3.25□□□□□ -2.93
RNU6-539P-201ENST00000516665 PMVKQ15126 192 aa-3.25□□□□□ -2.93
RNU6-539P-201ENST00000516665 GLRA4Q5JXX5 417 aa-3.25□□□□□ -2.93
RNU6-539P-201ENST00000516665 PDZK1Q5T2W1 519 aa-3.25□□□□□ -2.93
RNU6-539P-201ENST00000516665 TMED8Q6PL24 325 aaPredicted RBP-3.25□□□□□ -2.93
RNU6-539P-201ENST00000516665 ZNF705AQ6ZN79 300 aaPredicted RBP-3.25□□□□□ -2.93
RNU6-539P-201ENST00000516665 SSX7Q7RTT5 188 aa-3.25□□□□□ -2.93
RNU6-539P-201ENST00000516665 MTERF4Q7Z6M4 381 aaKnown RBP-3.25□□□□□ -2.93
RNU6-539P-201ENST00000516665 Q86TA4 180 aa-3.25□□□□□ -2.93
RNU6-539P-201ENST00000516665 LRRC75A-AS1Q8N1F1 130 aa-3.25□□□□□ -2.93
RNU6-539P-201ENST00000516665 OR52K1Q8NGK4 314 aa-3.25□□□□□ -2.93
RNU6-539P-201ENST00000516665 PLPPR1Q8TBJ4 325 aa-3.25□□□□□ -2.93
RNU6-539P-201ENST00000516665 RASSF5Q8WWW0 418 aa-3.25□□□□□ -2.93
RNU6-539P-201ENST00000516665 NAT6Q93015 286 aa-3.25□□□□□ -2.93
RNU6-539P-201ENST00000516665 C4orf36Q96KX1 117 aa-3.25□□□□□ -2.93
RNU6-539P-201ENST00000516665 VAT1Q99536 393 aa-3.25□□□□□ -2.93
RNU6-539P-201ENST00000516665 TSGA10Q9BZW7 698 aa-3.25□□□□□ -2.93
RNU6-539P-201ENST00000516665 GOLPH3Q9H4A6 298 aa-3.25□□□□□ -2.93
RNU6-539P-201ENST00000516665 CD209Q9NNX6 404 aa-3.25□□□□□ -2.93
RNU6-539P-201ENST00000516665 HMG20BQ9P0W2 317 aa-3.25□□□□□ -2.93
RNU6-539P-201ENST00000516665 CFAP45Q9UL16 551 aa-3.25□□□□□ -2.93
RNU6-539P-201ENST00000516665 C14orf166Q9Y224 244 aaKnown RBP-3.25□□□□□ -2.93
RNU6-539P-201ENST00000516665 PIGLQ9Y2B2 252 aa-3.25□□□□□ -2.93
RNU6-539P-201ENST00000516665 PPRC1Q5VV67 1664 aaKnown RBP-3.25□□□□□ -2.93
RNU6-539P-201ENST00000516665 COL6A5A8TX70 2615 aa-3.25□□□□□ -2.93
RNU6-539P-201ENST00000516665 ANK3Q12955 4377 aaKnown RBP-3.26□□□□□ -2.93
RNU6-539P-201ENST00000516665 ATRNO75882 1429 aa-3.26□□□□□ -2.93
RNU6-539P-201ENST00000516665 LOC389332A0A1B0GUA5 103 aa-3.26□□□□□ -2.93
RNU6-539P-201ENST00000516665 CFAP73A6NFT4 308 aa-3.26□□□□□ -2.93
RNU6-539P-201ENST00000516665 H7C2G1 150 aa-3.26□□□□□ -2.93
RNU6-539P-201ENST00000516665 J3QLI3 93 aa-3.26□□□□□ -2.93
RNU6-539P-201ENST00000516665 SDCBPO00560 298 aaPredicted RBP-3.26□□□□□ -2.93
RNU6-539P-201ENST00000516665 NME4O00746 187 aa-3.26□□□□□ -2.93
RNU6-539P-201ENST00000516665 KINO60870 393 aaKnown RBP-3.26□□□□□ -2.93
RNU6-539P-201ENST00000516665 DIRAS3O95661 229 aa-3.26□□□□□ -2.93
RNU6-539P-201ENST00000516665 UGT2B4P06133 528 aa-3.26□□□□□ -2.93
RNU6-539P-201ENST00000516665 ERICH5Q6P6B1 374 aa-3.26□□□□□ -2.93
RNU6-539P-201ENST00000516665 IDO2Q6ZQW0 420 aa-3.26□□□□□ -2.93
RNU6-539P-201ENST00000516665 Q6ZSR3 168 aa-3.26□□□□□ -2.93
RNU6-539P-201ENST00000516665 DHFR2Q86XF0 187 aa-3.26□□□□□ -2.93
RNU6-539P-201ENST00000516665 OR5AR1Q8NGP9 310 aa-3.26□□□□□ -2.93
RNU6-539P-201ENST00000516665 NAT14Q8WUY8 206 aa-3.26□□□□□ -2.93
RNU6-539P-201ENST00000516665 NELFBQ8WX92 580 aa-3.26□□□□□ -2.93
RNU6-539P-201ENST00000516665 JSRP1Q96MG2 331 aaPredicted RBP-3.26□□□□□ -2.93
RNU6-539P-201ENST00000516665 TRIM62Q9BVG3 475 aa-3.26□□□□□ -2.93
RNU6-539P-201ENST00000516665 PARD6BQ9BYG5 372 aa-3.26□□□□□ -2.93
RNU6-539P-201ENST00000516665 COMMD5Q9GZQ3 224 aa-3.26□□□□□ -2.93
RNU6-539P-201ENST00000516665 OR51V1Q9H2C8 321 aa-3.26□□□□□ -2.93
RNU6-539P-201ENST00000516665 AZI2Q9H6S1 392 aa-3.26□□□□□ -2.93
RNU6-539P-201ENST00000516665 WDR54Q9H977 334 aa-3.26□□□□□ -2.93
RNU6-539P-201ENST00000516665 MRPS30Q9NP92 439 aaKnown RBP-3.26□□□□□ -2.93
RNU6-539P-201ENST00000516665 POLE4Q9NR33 117 aa-3.26□□□□□ -2.93
RNU6-539P-201ENST00000516665 NBEAL2Q6ZNJ1 2754 aa-3.26□□□□□ -2.93
RNU6-539P-201ENST00000516665 UNC13BO14795 1591 aa-3.26□□□□□ -2.93
RNU6-539P-201ENST00000516665 NDUFS5O43920 106 aa-3.27□□□□□ -2.93
RNU6-539P-201ENST00000516665 CLDN9O95484 217 aa-3.27□□□□□ -2.93
RNU6-539P-201ENST00000516665 IGHV1-69P01742 117 aa-3.27□□□□□ -2.93
RNU6-539P-201ENST00000516665 REG1AP05451 166 aa-3.27□□□□□ -2.93
RNU6-539P-201ENST00000516665 SCGB1C2P0DMR2 95 aa-3.27□□□□□ -2.93
RNU6-539P-201ENST00000516665 RAB4AP20338 218 aa-3.27□□□□□ -2.93
RNU6-539P-201ENST00000516665 DEFA6Q01524 100 aa-3.27□□□□□ -2.93
RNU6-539P-201ENST00000516665 PDE6HQ13956 83 aa-3.27□□□□□ -2.93
RNU6-539P-201ENST00000516665 IMMTQ16891 758 aaKnown RBP-3.27□□□□□ -2.93
RNU6-539P-201ENST00000516665 DRAM2Q6UX65 266 aa-3.27□□□□□ -2.93
RNU6-539P-201ENST00000516665 CNEP1R1Q8N9A8 125 aa-3.27□□□□□ -2.93
RNU6-539P-201ENST00000516665 SCGB1C1Q8TD33 95 aa-3.27□□□□□ -2.93
RNU6-539P-201ENST00000516665 BCL2L14Q9BZR8 327 aa-3.27□□□□□ -2.93
RNU6-539P-201ENST00000516665 RBM12B-AS1Q9P1G2 102 aa-3.27□□□□□ -2.93
RNU6-539P-201ENST00000516665 ACTR3BQ9P1U1 418 aa-3.27□□□□□ -2.93
RNU6-539P-201ENST00000516665 MGAT4BQ9UQ53 548 aa-3.27□□□□□ -2.93
RNU6-539P-201ENST00000516665 AP3M1Q9Y2T2 418 aa-3.27□□□□□ -2.93
RNU6-539P-201ENST00000516665 STRAPQ9Y3F4 350 aaKnown RBP-3.27□□□□□ -2.93
RNU6-539P-201ENST00000516665 AKNAQ7Z591 1439 aa-3.27□□□□□ -2.93
RNU6-539P-201ENST00000516665 TRAV25A0A0B4J276 109 aa-3.28□□□□□ -2.93
RNU6-539P-201ENST00000516665 ANKRD65E5RJM6 399 aa-3.28□□□□□ -2.93
RNU6-539P-201ENST00000516665 FADS1O60427 444 aa-3.28□□□□□ -2.93
RNU6-539P-201ENST00000516665 NCK1P16333 377 aa-3.28□□□□□ -2.93
RNU6-539P-201ENST00000516665 GABRA2P47869 451 aa-3.28□□□□□ -2.93
RNU6-539P-201ENST00000516665 ROMO1P60602 79 aa-3.28□□□□□ -2.93
RNU6-539P-201ENST00000516665 USF2Q15853 346 aaPredicted RBP-3.28□□□□□ -2.93
RNU6-539P-201ENST00000516665 UBE2NLQ5JXB2 153 aa-3.28□□□□□ -2.93
RNU6-539P-201ENST00000516665 CDKL4Q5MAI5 379 aa-3.28□□□□□ -2.93
RNU6-539P-201ENST00000516665 BLOC1S2Q6QNY1 142 aa-3.28□□□□□ -2.93
RNU6-539P-201ENST00000516665 PATE2Q6UY27 113 aa-3.28□□□□□ -2.93
RNU6-539P-201ENST00000516665 FNDC9Q8TBE3 224 aa-3.28□□□□□ -2.93
RNU6-539P-201ENST00000516665 MITD1Q8WV92 249 aa-3.28□□□□□ -2.93
RNU6-539P-201ENST00000516665 PSMF1Q92530 271 aa-3.28□□□□□ -2.93
RNU6-539P-201ENST00000516665 PPWD1Q96BP3 646 aaKnown RBP-3.28□□□□□ -2.93
RNU6-539P-201ENST00000516665 TMEM175Q9BSA9 504 aa-3.28□□□□□ -2.93
RNU6-539P-201ENST00000516665 NXF2Q9GZY0 626 aaKnown RBP-3.28□□□□□ -2.93
RNU6-539P-201ENST00000516665 PRO0628Q9UI54 55 aa-3.28□□□□□ -2.93
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms