RNA–Protein interactions for RNA: ENST00000516060.1

SCARNA23-201, small Cajal body-specific RNA 23, humanhuman

BASIC

Gene SCARNA23, Length 130 nt, Biotype scaRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA23-201ENST00000516060 A0A0D9SEW6 157 aa-1.9□□□□□ -2.71
SCARNA23-201ENST00000516060 A0A1B0GWJ7 208 aa-1.9□□□□□ -2.71
SCARNA23-201ENST00000516060 BHLHE40O14503 412 aa-1.9□□□□□ -2.71
SCARNA23-201ENST00000516060 B3GALNT1O75752 331 aa-1.9□□□□□ -2.71
SCARNA23-201ENST00000516060 IDH1O75874 414 aaKnown RBP-1.9□□□□□ -2.71
SCARNA23-201ENST00000516060 IFITM1P13164 125 aa-1.9□□□□□ -2.71
SCARNA23-201ENST00000516060 GTF2H1P32780 548 aa-1.9□□□□□ -2.71
SCARNA23-201ENST00000516060 MDH1P40925 334 aaKnown RBP-1.9□□□□□ -2.71
SCARNA23-201ENST00000516060 RFC3P40938 356 aa-1.9□□□□□ -2.71
SCARNA23-201ENST00000516060 GABRA6Q16445 453 aa-1.9□□□□□ -2.71
SCARNA23-201ENST00000516060 Q499Y3 187 aa-1.9□□□□□ -2.71
SCARNA23-201ENST00000516060 HENMT1Q5T8I9 393 aaKnown RBP-1.9□□□□□ -2.71
SCARNA23-201ENST00000516060 CLECL1Q8IZS7 167 aa-1.9□□□□□ -2.71
SCARNA23-201ENST00000516060 C17orf78Q8N4C9 275 aa-1.9□□□□□ -2.71
SCARNA23-201ENST00000516060 PROKR2Q8NFJ6 384 aa-1.9□□□□□ -2.71
SCARNA23-201ENST00000516060 OR4P4Q8NGL7 312 aa-1.9□□□□□ -2.71
SCARNA23-201ENST00000516060 OR9G4Q8NGQ1 327 aa-1.9□□□□□ -2.71
SCARNA23-201ENST00000516060 OR5P2Q8WZ92 322 aa-1.9□□□□□ -2.71
SCARNA23-201ENST00000516060 RCN3Q96D15 328 aa-1.9□□□□□ -2.71
SCARNA23-201ENST00000516060 ACBD6Q9BR61 282 aa-1.9□□□□□ -2.71
SCARNA23-201ENST00000516060 TMED9Q9BVK6 235 aa-1.9□□□□□ -2.71
SCARNA23-201ENST00000516060 GOLPH3Q9H4A6 298 aa-1.9□□□□□ -2.71
SCARNA23-201ENST00000516060 REEP1Q9H902 201 aa-1.9□□□□□ -2.71
SCARNA23-201ENST00000516060 ANAPC1Q9H1A4 1944 aa-1.9□□□□□ -2.71
SCARNA23-201ENST00000516060 HECTD1Q9ULT8 2610 aa-1.91□□□□□ -2.72
SCARNA23-201ENST00000516060 TRBV9A0A0B4J1U6 114 aa-1.91□□□□□ -2.72
SCARNA23-201ENST00000516060 FAM170AA1A519 330 aa-1.91□□□□□ -2.72
SCARNA23-201ENST00000516060 OR2AT4A6NND4 320 aa-1.91□□□□□ -2.72
SCARNA23-201ENST00000516060 J3QLI3 93 aa-1.91□□□□□ -2.72
SCARNA23-201ENST00000516060 CD160O95971 181 aa-1.91□□□□□ -2.72
SCARNA23-201ENST00000516060 LTAP01374 205 aa-1.91□□□□□ -2.72
SCARNA23-201ENST00000516060 CECR9P0C854 216 aa-1.91□□□□□ -2.72
SCARNA23-201ENST00000516060 TAC1P20366 129 aa-1.91□□□□□ -2.72
SCARNA23-201ENST00000516060 GABRA3P34903 492 aa-1.91□□□□□ -2.72
SCARNA23-201ENST00000516060 TNNT2P45379 298 aaPredicted RBP-1.91□□□□□ -2.72
SCARNA23-201ENST00000516060 TSPEAR-AS2P59090 65 aa-1.91□□□□□ -2.72
SCARNA23-201ENST00000516060 PSG9Q00887 426 aa-1.91□□□□□ -2.72
SCARNA23-201ENST00000516060 SELENBP1Q13228 472 aa-1.91□□□□□ -2.72
SCARNA23-201ENST00000516060 TTC23LQ6PF05 361 aa-1.91□□□□□ -2.72
SCARNA23-201ENST00000516060 FAM19A5Q7Z5A7 132 aaPredicted RBP-1.91□□□□□ -2.72
SCARNA23-201ENST00000516060 VTCN1Q7Z7D3 282 aa-1.91□□□□□ -2.72
SCARNA23-201ENST00000516060 C3orf56Q8N813 242 aa-1.91□□□□□ -2.72
SCARNA23-201ENST00000516060 OR56A4Q8NGH8 313 aa-1.91□□□□□ -2.72
SCARNA23-201ENST00000516060 OR1L8Q8NGR8 309 aa-1.91□□□□□ -2.72
SCARNA23-201ENST00000516060 ATP6V1E2Q96A05 226 aa-1.91□□□□□ -2.72
SCARNA23-201ENST00000516060 SCGB3A2Q96PL1 93 aa-1.91□□□□□ -2.72
SCARNA23-201ENST00000516060 TMEM237Q96Q45 408 aa-1.91□□□□□ -2.72
SCARNA23-201ENST00000516060 METTL26Q96S19 204 aa-1.91□□□□□ -2.72
SCARNA23-201ENST00000516060 FAAP24Q9BTP7 215 aa-1.91□□□□□ -2.72
SCARNA23-201ENST00000516060 TPPP3Q9BW30 176 aa-1.91□□□□□ -2.72
SCARNA23-201ENST00000516060 ZYG11BQ9C0D3 744 aa-1.91□□□□□ -2.72
SCARNA23-201ENST00000516060 EIF5A2Q9GZV4 153 aaKnown RBP-1.91□□□□□ -2.72
SCARNA23-201ENST00000516060 DCSTAMPQ9H295 470 aa-1.91□□□□□ -2.72
SCARNA23-201ENST00000516060 RWDD1Q9H446 243 aaPredicted RBP-1.91□□□□□ -2.72
SCARNA23-201ENST00000516060 TMEM165Q9HC07 324 aa-1.91□□□□□ -2.72
SCARNA23-201ENST00000516060 OR51B2Q9Y5P1 312 aa-1.91□□□□□ -2.72
SCARNA23-201ENST00000516060 SCAF11Q99590 1463 aaKnown RBP-1.91□□□□□ -2.72
SCARNA23-201ENST00000516060 GOLGA6L10A6NI86 522 aa-1.92□□□□□ -2.72
SCARNA23-201ENST00000516060 PCP4L1A6NKN8 68 aa-1.92□□□□□ -2.72
SCARNA23-201ENST00000516060 H0YC42 278 aa-1.92□□□□□ -2.72
SCARNA23-201ENST00000516060 UBDO15205 165 aa-1.92□□□□□ -2.72
SCARNA23-201ENST00000516060 CST1P01037 141 aa-1.92□□□□□ -2.72
SCARNA23-201ENST00000516060 UBBP0CG47 229 aa-1.92□□□□□ -2.72
SCARNA23-201ENST00000516060 CCL3P10147 92 aa-1.92□□□□□ -2.72
SCARNA23-201ENST00000516060 ZNF24P17028 368 aa-1.92□□□□□ -2.72
SCARNA23-201ENST00000516060 PRTN3P24158 256 aa-1.92□□□□□ -2.72
SCARNA23-201ENST00000516060 GPR1P46091 355 aa-1.92□□□□□ -2.72
SCARNA23-201ENST00000516060 RPL28P46779 137 aaKnown RBP-1.92□□□□□ -2.72
SCARNA23-201ENST00000516060 ETV1P50549 477 aa-1.92□□□□□ -2.72
SCARNA23-201ENST00000516060 RPL18AQ02543 176 aaKnown RBP-1.92□□□□□ -2.72
SCARNA23-201ENST00000516060 INAQ16352 499 aa-1.92□□□□□ -2.72
SCARNA23-201ENST00000516060 GOLGA7BQ2TAP0 167 aa-1.92□□□□□ -2.72
SCARNA23-201ENST00000516060 CDNFQ49AH0 187 aa-1.92□□□□□ -2.72
SCARNA23-201ENST00000516060 NXNL2Q5VZ03 156 aa-1.92□□□□□ -2.72
SCARNA23-201ENST00000516060 LYZL1Q6UWQ5 148 aa-1.92□□□□□ -2.72
SCARNA23-201ENST00000516060 NDUFAF7Q7L592 441 aa-1.92□□□□□ -2.72
SCARNA23-201ENST00000516060 TMEM156Q8N614 296 aa-1.92□□□□□ -2.72
SCARNA23-201ENST00000516060 FNDC9Q8TBE3 224 aa-1.92□□□□□ -2.72
SCARNA23-201ENST00000516060 CCDC47Q96A33 483 aaKnown RBP-1.92□□□□□ -2.72
SCARNA23-201ENST00000516060 CCDC127Q96BQ5 260 aa-1.92□□□□□ -2.72
SCARNA23-201ENST00000516060 AGMATQ9BSE5 352 aa-1.92□□□□□ -2.72
SCARNA23-201ENST00000516060 ROPN1BQ9BZX4 212 aaPredicted RBP-1.92□□□□□ -2.72
SCARNA23-201ENST00000516060 WDR55Q9H6Y2 383 aaPredicted RBP-1.92□□□□□ -2.72
SCARNA23-201ENST00000516060 PROK2Q9HC23 129 aa-1.92□□□□□ -2.72
SCARNA23-201ENST00000516060 TBC1D24Q9ULP9 559 aa-1.92□□□□□ -2.72
SCARNA23-201ENST00000516060 KIF3AQ9Y496 699 aa-1.92□□□□□ -2.72
SCARNA23-201ENST00000516060 CSMD3Q7Z407 3707 aa-1.92□□□□□ -2.72
SCARNA23-201ENST00000516060 USP9YO00507 2555 aaPredicted RBP-1.92□□□□□ -2.72
SCARNA23-201ENST00000516060 ABCB11O95342 1321 aa-1.92□□□□□ -2.72
SCARNA23-201ENST00000516060 CEP192Q8TEP8 1941 aa-1.93□□□□□ -2.72
SCARNA23-201ENST00000516060 HYPMO75409 117 aa-1.93□□□□□ -2.72
SCARNA23-201ENST00000516060 UBE2IP63279 158 aaKnown RBP-1.93□□□□□ -2.72
SCARNA23-201ENST00000516060 SLC35A2P78381 396 aa-1.93□□□□□ -2.72
SCARNA23-201ENST00000516060 DEFA6Q01524 100 aa-1.93□□□□□ -2.72
SCARNA23-201ENST00000516060 TRMT5Q32P41 509 aaKnown RBP-1.93□□□□□ -2.72
SCARNA23-201ENST00000516060 CTSL3PQ5NE16 218 aa-1.93□□□□□ -2.72
SCARNA23-201ENST00000516060 TMEM220Q6QAJ8 160 aa-1.93□□□□□ -2.72
SCARNA23-201ENST00000516060 SPESP1Q6UW49 350 aa-1.93□□□□□ -2.72
SCARNA23-201ENST00000516060 OR10Z1Q8NGY1 313 aa-1.93□□□□□ -2.72
SCARNA23-201ENST00000516060 ING5Q8WYH8 240 aa-1.93□□□□□ -2.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms