RNA–Protein interactions for RNA: ENST00000515459.5

LMNA-223, Transcript of lamin A/C, humanhuman

TSL 5

Gene LMNA, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-223ENST00000515459 GABPB1Q06547 395 aaPredicted RBP12.21□□□□□ -0.45
LMNA-223ENST00000515459 MMDQ15546 238 aa12.21□□□□□ -0.45
LMNA-223ENST00000515459 ASCL4Q6XD76 172 aa12.21□□□□□ -0.45
LMNA-223ENST00000515459 SLC25A48Q6ZT89 311 aaKnown RBP12.21□□□□□ -0.45
LMNA-223ENST00000515459 AMIGO2Q86SJ2 522 aa12.21□□□□□ -0.45
LMNA-223ENST00000515459 CCDC107Q8WV48 283 aa12.21□□□□□ -0.45
LMNA-223ENST00000515459 RBMXL1Q96E39 390 aaKnown RBP12.21□□□□□ -0.45
LMNA-223ENST00000515459 MRPL48Q96GC5 212 aaKnown RBP12.21□□□□□ -0.45
LMNA-223ENST00000515459 MYCBPQ99417 103 aaPredicted RBP12.21□□□□□ -0.45
LMNA-223ENST00000515459 IMPAD1Q9NX62 359 aa12.21□□□□□ -0.45
LMNA-223ENST00000515459 WSB1Q9Y6I7 421 aa12.21□□□□□ -0.45
LMNA-223ENST00000515459 TRIM64CA6NLI5 447 aa12.2□□□□□ -0.46
LMNA-223ENST00000515459 SLC31A2O15432 143 aa12.2□□□□□ -0.46
LMNA-223ENST00000515459 CDRT1O95170 752 aa12.2□□□□□ -0.46
LMNA-223ENST00000515459 CSTBP04080 98 aaKnown RBP12.2□□□□□ -0.46
LMNA-223ENST00000515459 VHLP40337 213 aa12.2□□□□□ -0.46
LMNA-223ENST00000515459 RAB9AP51151 201 aa12.2□□□□□ -0.46
LMNA-223ENST00000515459 RBM11P57052 281 aaKnown RBP12.2□□□□□ -0.46
LMNA-223ENST00000515459 GALEQ14376 348 aa12.2□□□□□ -0.46
LMNA-223ENST00000515459 NHLRC3Q5JS37 347 aa12.2□□□□□ -0.46
LMNA-223ENST00000515459 ZNF529Q6P280 563 aa12.2□□□□□ -0.46
LMNA-223ENST00000515459 ZNF439Q8NDP4 499 aa12.2□□□□□ -0.46
LMNA-223ENST00000515459 OR51A2Q8NGJ7 313 aa12.2□□□□□ -0.46
LMNA-223ENST00000515459 OR6Q1Q8NGQ2 317 aa12.2□□□□□ -0.46
LMNA-223ENST00000515459 OR52N1Q8NH53 320 aa12.2□□□□□ -0.46
LMNA-223ENST00000515459 OR5AK2Q8NH90 309 aa12.2□□□□□ -0.46
LMNA-223ENST00000515459 DLX4Q92988 240 aaPredicted RBP12.2□□□□□ -0.46
LMNA-223ENST00000515459 ISOC1Q96CN7 298 aa12.2□□□□□ -0.46
LMNA-223ENST00000515459 TM2D3Q9BRN9 247 aa12.2□□□□□ -0.46
LMNA-223ENST00000515459 GHITMQ9H3K2 345 aa12.2□□□□□ -0.46
LMNA-223ENST00000515459 EPPK1P58107 5090 aaKnown RBP12.19□□□□□ -0.46
LMNA-223ENST00000515459 TRAV41A0A0B4J266 112 aa12.19□□□□□ -0.46
LMNA-223ENST00000515459 FAM90A10PA6NDY2 464 aa12.19□□□□□ -0.46
LMNA-223ENST00000515459 AIPO00170 330 aa12.19□□□□□ -0.46
LMNA-223ENST00000515459 GEMIN2O14893 280 aaKnown RBP12.19□□□□□ -0.46
LMNA-223ENST00000515459 ATP6V0E1O15342 81 aa12.19□□□□□ -0.46
LMNA-223ENST00000515459 ZNF134P52741 427 aa12.19□□□□□ -0.46
LMNA-223ENST00000515459 SLC25A30Q5SVS4 291 aa12.19□□□□□ -0.46
LMNA-223ENST00000515459 ATAD3CQ5T2N8 411 aa12.19□□□□□ -0.46
LMNA-223ENST00000515459 MEDAGQ5VYS4 303 aa12.19□□□□□ -0.46
LMNA-223ENST00000515459 LINC00596Q86U02 117 aa12.19□□□□□ -0.46
LMNA-223ENST00000515459 SYS1Q8N2H4 156 aa12.19□□□□□ -0.46
LMNA-223ENST00000515459 NEK7Q8TDX7 302 aa12.19□□□□□ -0.46
LMNA-223ENST00000515459 SLC7A6OSQ96CW6 309 aaPredicted RBP12.19□□□□□ -0.46
LMNA-223ENST00000515459 PDCD1LG2Q9BQ51 273 aa12.19□□□□□ -0.46
LMNA-223ENST00000515459 ALG8Q9BVK2 526 aa12.19□□□□□ -0.46
LMNA-223ENST00000515459 ISG20L2Q9H9L3 353 aaKnown RBP12.19□□□□□ -0.46
LMNA-223ENST00000515459 RAB9BQ9NP90 201 aa12.19□□□□□ -0.46
LMNA-223ENST00000515459 PARP11Q9NR21 331 aa12.19□□□□□ -0.46
LMNA-223ENST00000515459 IL36GQ9NZH8 169 aa12.19□□□□□ -0.46
LMNA-223ENST00000515459 GNG12Q9UBI6 72 aa12.19□□□□□ -0.46
LMNA-223ENST00000515459 ING4Q9UNL4 249 aa12.19□□□□□ -0.46
LMNA-223ENST00000515459 EXOGQ9Y2C4 368 aaKnown RBP12.19□□□□□ -0.46
LMNA-223ENST00000515459 AP4S1Q9Y587 144 aa12.19□□□□□ -0.46
LMNA-223ENST00000515459 SACSQ9NZJ4 4579 aa12.19□□□□□ -0.46
LMNA-223ENST00000515459 CSMD3Q7Z407 3707 aa12.18□□□□□ -0.46
LMNA-223ENST00000515459 LINC01619G3V211 115 aa12.18□□□□□ -0.46
LMNA-223ENST00000515459 LDLRAD4O15165 306 aa12.18□□□□□ -0.46
LMNA-223ENST00000515459 SPINT2O43291 252 aa12.18□□□□□ -0.46
LMNA-223ENST00000515459 HLA-DRB1P01911 266 aa12.18□□□□□ -0.46
LMNA-223ENST00000515459 MT-ND4P03905 459 aa12.18□□□□□ -0.46
LMNA-223ENST00000515459 SLURP1P55000 103 aa12.18□□□□□ -0.46
LMNA-223ENST00000515459 MRPL28Q13084 256 aaKnown RBP12.18□□□□□ -0.46
LMNA-223ENST00000515459 LSAMPQ13449 338 aa12.18□□□□□ -0.46
LMNA-223ENST00000515459 SRSF7Q16629 238 aaKnown RBP eCLIP12.18□□□□□ -0.46
LMNA-223ENST00000515459 MPV17LQ2QL34 196 aa12.18□□□□□ -0.46
LMNA-223ENST00000515459 TMEM30BQ3MIR4 351 aa12.18□□□□□ -0.46
LMNA-223ENST00000515459 CT45A1Q5HYN5 189 aa12.18□□□□□ -0.46
LMNA-223ENST00000515459 ACSM6Q6P461 480 aa12.18□□□□□ -0.46
LMNA-223ENST00000515459 ZNF497Q6ZNH5 498 aa12.18□□□□□ -0.46
LMNA-223ENST00000515459 LHFPL3Q86UP9 236 aa12.18□□□□□ -0.46
LMNA-223ENST00000515459 STX19Q8N4C7 294 aa12.18□□□□□ -0.46
LMNA-223ENST00000515459 CT45A3Q8NHU0 189 aa12.18□□□□□ -0.46
LMNA-223ENST00000515459 ALX4Q9H161 411 aaPredicted RBP12.18□□□□□ -0.46
LMNA-223ENST00000515459 METTL9Q9H1A3 318 aa12.18□□□□□ -0.46
LMNA-223ENST00000515459 EDA2RQ9HAV5 297 aa12.18□□□□□ -0.46
LMNA-223ENST00000515459 OAZ3Q9UMX2 235 aa12.18□□□□□ -0.46
LMNA-223ENST00000515459 DNAH1Q9P2D7 4330 aa12.18□□□□□ -0.46
LMNA-223ENST00000515459 MAGEA13PA6NCF6 341 aa12.17□□□□□ -0.46
LMNA-223ENST00000515459 SNTNA6NMZ2 147 aa12.17□□□□□ -0.46
LMNA-223ENST00000515459 LANCL1O43813 399 aa12.17□□□□□ -0.46
LMNA-223ENST00000515459 OR8U9P0C7N5 309 aa12.17□□□□□ -0.46
LMNA-223ENST00000515459 FCGR1AP12314 374 aa12.17□□□□□ -0.46
LMNA-223ENST00000515459 SERPINA2P20848 420 aa12.17□□□□□ -0.46
LMNA-223ENST00000515459 ACTBP60709 375 aa12.17□□□□□ -0.46
LMNA-223ENST00000515459 SNRPGP62308 76 aaKnown RBP12.17□□□□□ -0.46
LMNA-223ENST00000515459 STEAP3Q658P3 488 aa12.17□□□□□ -0.46
LMNA-223ENST00000515459 ADAMTSL5Q6ZMM2 481 aa12.17□□□□□ -0.46
LMNA-223ENST00000515459 OR10V1Q8NGI7 309 aa12.17□□□□□ -0.46
LMNA-223ENST00000515459 ARPC1AQ92747 370 aa12.17□□□□□ -0.46
LMNA-223ENST00000515459 LGALS12Q96DT0 336 aa12.17□□□□□ -0.46
LMNA-223ENST00000515459 S100A13Q99584 98 aa12.17□□□□□ -0.46
LMNA-223ENST00000515459 JAM3Q9BX67 310 aa12.17□□□□□ -0.46
LMNA-223ENST00000515459 PAK1IP1Q9NWT1 392 aaPredicted RBP12.17□□□□□ -0.46
LMNA-223ENST00000515459 TAS2R4Q9NYW5 299 aa12.17□□□□□ -0.46
LMNA-223ENST00000515459 MRPS28Q9Y2Q9 187 aaKnown RBP12.17□□□□□ -0.46
LMNA-223ENST00000515459 IGHV7-81A0A0B4J1V7 117 aa12.16□□□□□ -0.46
LMNA-223ENST00000515459 C12orf77C9JDV5 145 aa12.16□□□□□ -0.46
LMNA-223ENST00000515459 E9PI62 339 aa12.16□□□□□ -0.46
LMNA-223ENST00000515459 CD2P06729 351 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms