RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 SYT6Q5T7P8 510 aaPredicted RBP10.27□□□□□ -0.77
CLCN3-210ENST00000515420 SPARTQ8N0X7 666 aa10.27□□□□□ -0.77
CLCN3-210ENST00000515420 TOMM40LQ969M1 308 aa10.27□□□□□ -0.77
CLCN3-210ENST00000515420 ARL11Q969Q4 196 aa10.27□□□□□ -0.77
CLCN3-210ENST00000515420 RPEQ96AT9 228 aa10.27□□□□□ -0.77
CLCN3-210ENST00000515420 AKR1E2Q96JD6 320 aa10.27□□□□□ -0.77
CLCN3-210ENST00000515420 GFI1Q99684 422 aa10.27□□□□□ -0.77
CLCN3-210ENST00000515420 URM1Q9BTM9 101 aaKnown RBP10.27□□□□□ -0.77
CLCN3-210ENST00000515420 LIN7BQ9HAP6 207 aa10.27□□□□□ -0.77
CLCN3-210ENST00000515420 PLGRKTQ9HBL7 147 aa10.27□□□□□ -0.77
CLCN3-210ENST00000515420 TRAPPC2LQ9UL33 140 aa10.27□□□□□ -0.77
CLCN3-210ENST00000515420 V9GY05 133 aa10.27□□□□□ -0.77
CLCN3-210ENST00000515420 TRAV39A0A0B4J263 110 aa10.26□□□□□ -0.77
CLCN3-210ENST00000515420 C12orf77C9JDV5 145 aa10.26□□□□□ -0.77
CLCN3-210ENST00000515420 SDCBPO00560 298 aaPredicted RBP10.26□□□□□ -0.77
CLCN3-210ENST00000515420 PDCD5O14737 125 aa10.26□□□□□ -0.77
CLCN3-210ENST00000515420 TIMM23O14925 209 aa10.26□□□□□ -0.77
CLCN3-210ENST00000515420 RAB7AP51149 207 aa10.26□□□□□ -0.77
CLCN3-210ENST00000515420 RAB11BQ15907 218 aa10.26□□□□□ -0.77
CLCN3-210ENST00000515420 UTF1Q5T230 341 aa10.26□□□□□ -0.77
CLCN3-210ENST00000515420 STEAP3Q658P3 488 aa10.26□□□□□ -0.77
CLCN3-210ENST00000515420 THNSL2Q86YJ6 484 aa10.26□□□□□ -0.77
CLCN3-210ENST00000515420 OR8H3Q8N146 312 aa10.26□□□□□ -0.77
CLCN3-210ENST00000515420 FAM89BQ8N5H3 189 aa10.26□□□□□ -0.77
CLCN3-210ENST00000515420 PRSS22Q9GZN4 317 aa10.26□□□□□ -0.77
CLCN3-210ENST00000515420 GFOD1Q9NXC2 390 aa10.26□□□□□ -0.77
CLCN3-210ENST00000515420 AK6Q9Y3D8 172 aaKnown RBP10.26□□□□□ -0.77
CLCN3-210ENST00000515420 FAM90A9PA6NNJ1 464 aa10.25□□□□□ -0.77
CLCN3-210ENST00000515420 JUNBP17275 347 aaPredicted RBP10.25□□□□□ -0.77
CLCN3-210ENST00000515420 MYL9P24844 172 aa10.25□□□□□ -0.77
CLCN3-210ENST00000515420 FGF9P31371 208 aaPredicted RBP10.25□□□□□ -0.77
CLCN3-210ENST00000515420 ZNF816Q0VGE8 651 aaPredicted RBP10.25□□□□□ -0.77
CLCN3-210ENST00000515420 KCTD21Q4G0X4 260 aa10.25□□□□□ -0.77
CLCN3-210ENST00000515420 OR10K2Q6IF99 312 aa10.25□□□□□ -0.77
CLCN3-210ENST00000515420 ZNF773Q6PK81 442 aa10.25□□□□□ -0.77
CLCN3-210ENST00000515420 TMEM219Q86XT9 240 aa10.25□□□□□ -0.77
CLCN3-210ENST00000515420 OR10X1Q8NGY0 326 aa10.25□□□□□ -0.77
CLCN3-210ENST00000515420 OR4K15Q8NH41 348 aa10.25□□□□□ -0.77
CLCN3-210ENST00000515420 MRPL30Q8TCC3 161 aaKnown RBP10.25□□□□□ -0.77
CLCN3-210ENST00000515420 CCDC107Q8WV48 283 aa10.25□□□□□ -0.77
CLCN3-210ENST00000515420 FAM3DQ96BQ1 224 aa10.25□□□□□ -0.77
CLCN3-210ENST00000515420 OCSTAMPQ9BR26 566 aa10.25□□□□□ -0.77
CLCN3-210ENST00000515420 LPAR5Q9H1C0 372 aa10.25□□□□□ -0.77
CLCN3-210ENST00000515420 ZNF702PQ9H963 129 aa10.25□□□□□ -0.77
CLCN3-210ENST00000515420 KCNIP1Q9NZI2 227 aa10.25□□□□□ -0.77
CLCN3-210ENST00000515420 HSF4Q9ULV5 492 aa10.25□□□□□ -0.77
CLCN3-210ENST00000515420 A0A1W2PPI3 338 aa10.24□□□□□ -0.77
CLCN3-210ENST00000515420 UBE2QL1A1L167 161 aa10.24□□□□□ -0.77
CLCN3-210ENST00000515420 M0QZ24 198 aa10.24□□□□□ -0.77
CLCN3-210ENST00000515420 M0QZK8 103 aa10.24□□□□□ -0.77
CLCN3-210ENST00000515420 OR2F2O95006 317 aa10.24□□□□□ -0.77
CLCN3-210ENST00000515420 HBZP02008 142 aa10.24□□□□□ -0.77
CLCN3-210ENST00000515420 RCC1P18754 421 aaPredicted RBP10.24□□□□□ -0.77
CLCN3-210ENST00000515420 IL3RAP26951 378 aa10.24□□□□□ -0.77
CLCN3-210ENST00000515420 BLVRBP30043 206 aaPredicted RBP10.24□□□□□ -0.77
CLCN3-210ENST00000515420 GNG10P50151 68 aa10.24□□□□□ -0.77
CLCN3-210ENST00000515420 ZNF137PP52743 207 aa10.24□□□□□ -0.77
CLCN3-210ENST00000515420 KRTAP10-3P60369 221 aa10.24□□□□□ -0.77
CLCN3-210ENST00000515420 HABP2Q14520 560 aaPredicted RBP10.24□□□□□ -0.77
CLCN3-210ENST00000515420 LTC4SQ16873 150 aa10.24□□□□□ -0.77
CLCN3-210ENST00000515420 NKAPLQ5M9Q1 402 aa10.24□□□□□ -0.77
CLCN3-210ENST00000515420 SLC25A48Q6ZT89 311 aaKnown RBP10.24□□□□□ -0.77
CLCN3-210ENST00000515420 MOB1BQ7L9L4 216 aa10.24□□□□□ -0.77
CLCN3-210ENST00000515420 ZNF439Q8NDP4 499 aa10.24□□□□□ -0.77
CLCN3-210ENST00000515420 LEAP2Q969E1 77 aa10.24□□□□□ -0.77
CLCN3-210ENST00000515420 RBM14Q96PK6 669 aaKnown RBP10.24□□□□□ -0.77
CLCN3-210ENST00000515420 SULT4A1Q9BR01 284 aa10.24□□□□□ -0.77
CLCN3-210ENST00000515420 NICN1Q9BSH3 213 aa10.24□□□□□ -0.77
CLCN3-210ENST00000515420 RIMS4Q9H426 269 aaPredicted RBP10.24□□□□□ -0.77
CLCN3-210ENST00000515420 TAF9BQ9HBM6 251 aa10.24□□□□□ -0.77
CLCN3-210ENST00000515420 PLEKHJ1Q9NW61 149 aa10.24□□□□□ -0.77
CLCN3-210ENST00000515420 GNG12Q9UBI6 72 aa10.24□□□□□ -0.77
CLCN3-210ENST00000515420 STEAP1Q9UHE8 339 aa10.24□□□□□ -0.77
CLCN3-210ENST00000515420 JPT1Q9UK76 154 aa10.24□□□□□ -0.77
CLCN3-210ENST00000515420 MGAM2Q2M2H8 2515 aa10.24□□□□□ -0.77
CLCN3-210ENST00000515420 TET2Q6N021 2002 aaPredicted RBP10.23□□□□□ -0.77
CLCN3-210ENST00000515420 TRBV6-6A0A0A6YYG2 114 aa10.23□□□□□ -0.77
CLCN3-210ENST00000515420 HSD17B6O14756 317 aa10.23□□□□□ -0.77
CLCN3-210ENST00000515420 LDLRAD4O15165 306 aa10.23□□□□□ -0.77
CLCN3-210ENST00000515420 TXNL1O43396 289 aa10.23□□□□□ -0.77
CLCN3-210ENST00000515420 NAPSAO96009 420 aa10.23□□□□□ -0.77
CLCN3-210ENST00000515420 IGHV3-7P01780 117 aa10.23□□□□□ -0.77
CLCN3-210ENST00000515420 GAPDHP04406 335 aaKnown RBP10.23□□□□□ -0.77
CLCN3-210ENST00000515420 FAM106CPP0CH98 169 aa10.23□□□□□ -0.77
CLCN3-210ENST00000515420 RAB3BP20337 219 aa10.23□□□□□ -0.77
CLCN3-210ENST00000515420 PSMB9P28065 219 aa10.23□□□□□ -0.77
CLCN3-210ENST00000515420 HTD2P86397 168 aa10.23□□□□□ -0.77
CLCN3-210ENST00000515420 SRSF4Q08170 494 aaKnown RBP10.23□□□□□ -0.77
CLCN3-210ENST00000515420 HERPUD1Q15011 391 aa10.23□□□□□ -0.77
CLCN3-210ENST00000515420 P2RY14Q15391 338 aa10.23□□□□□ -0.77
CLCN3-210ENST00000515420 HMGN3Q15651 99 aa10.23□□□□□ -0.77
CLCN3-210ENST00000515420 LY6G6FQ5SQ64 297 aa10.23□□□□□ -0.77
CLCN3-210ENST00000515420 ZNF880Q6PDB4 577 aa10.23□□□□□ -0.77
CLCN3-210ENST00000515420 C6orf201Q7Z4U5 140 aa10.23□□□□□ -0.77
CLCN3-210ENST00000515420 OR51D1Q8NGF3 324 aa10.23□□□□□ -0.77
CLCN3-210ENST00000515420 OR56B1Q8NGI3 324 aa10.23□□□□□ -0.77
CLCN3-210ENST00000515420 CAPSLQ8WWF8 208 aa10.23□□□□□ -0.77
CLCN3-210ENST00000515420 CFHR4Q92496 578 aa10.23□□□□□ -0.77
CLCN3-210ENST00000515420 SLC25A33Q9BSK2 321 aa10.23□□□□□ -0.77
CLCN3-210ENST00000515420 FAAP24Q9BTP7 215 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms