RNA–Protein interactions for RNA: ENST00000514536.5

USP46-209, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 1,589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-209ENST00000514536 PLA1AQ53H76 456 aa11.29□□□□□ -0.6
USP46-209ENST00000514536 PLAC9Q5JTB6 97 aa11.29□□□□□ -0.6
USP46-209ENST00000514536 C6orf183Q5T699 404 aa11.29□□□□□ -0.6
USP46-209ENST00000514536 FAM53AQ6NSI3 398 aaPredicted RBP11.29□□□□□ -0.6
USP46-209ENST00000514536 C5orf24Q7Z6I8 188 aa11.29□□□□□ -0.6
USP46-209ENST00000514536 PRR18Q8N4B5 295 aa11.29□□□□□ -0.6
USP46-209ENST00000514536 OR9G1Q8NH87 305 aa11.29□□□□□ -0.6
USP46-209ENST00000514536 OR1L1Q8NH94 360 aa11.29□□□□□ -0.6
USP46-209ENST00000514536 TAF15Q92804 592 aaKnown RBP eCLIP11.29□□□□□ -0.6
USP46-209ENST00000514536 PECRQ9BY49 303 aa11.29□□□□□ -0.6
USP46-209ENST00000514536 MRPS26Q9BYN8 205 aaKnown RBP11.29□□□□□ -0.6
USP46-209ENST00000514536 KCNIP1Q9NZI2 227 aa11.29□□□□□ -0.6
USP46-209ENST00000514536 AK3Q9UIJ7 227 aa11.29□□□□□ -0.6
USP46-209ENST00000514536 HSF4Q9ULV5 492 aa11.29□□□□□ -0.6
USP46-209ENST00000514536 IGHV3-43A0A0B4J1X8 118 aa11.28□□□□□ -0.6
USP46-209ENST00000514536 BTBD17A6NE02 478 aa11.28□□□□□ -0.6
USP46-209ENST00000514536 FAM181BA6NEQ2 426 aa11.28□□□□□ -0.6
USP46-209ENST00000514536 H3BUX3 64 aa11.28□□□□□ -0.6
USP46-209ENST00000514536 SDCBPO00560 298 aaPredicted RBP11.28□□□□□ -0.6
USP46-209ENST00000514536 SPINT2O43291 252 aa11.28□□□□□ -0.6
USP46-209ENST00000514536 HBZP02008 142 aa11.28□□□□□ -0.6
USP46-209ENST00000514536 IGHV3-43DP0DP04 118 aa11.28□□□□□ -0.6
USP46-209ENST00000514536 RAB13P51153 203 aa11.28□□□□□ -0.6
USP46-209ENST00000514536 LRRC75BQ2VPJ9 315 aa11.28□□□□□ -0.6
USP46-209ENST00000514536 HLA-DRB5Q30154 266 aa11.28□□□□□ -0.6
USP46-209ENST00000514536 MOGAT2Q3SYC2 334 aa11.28□□□□□ -0.6
USP46-209ENST00000514536 IDNKQ5T6J7 187 aa11.28□□□□□ -0.6
USP46-209ENST00000514536 TRAT1Q6PIZ9 186 aa11.28□□□□□ -0.6
USP46-209ENST00000514536 PTX4Q96A99 478 aa11.28□□□□□ -0.6
USP46-209ENST00000514536 ATG5Q9H1Y0 275 aa11.28□□□□□ -0.6
USP46-209ENST00000514536 TAF9BQ9HBM6 251 aa11.28□□□□□ -0.6
USP46-209ENST00000514536 CHMP1AQ9HD42 196 aaPredicted RBP11.28□□□□□ -0.6
USP46-209ENST00000514536 MBNL3Q9NUK0 354 aaKnown RBP11.28□□□□□ -0.6
USP46-209ENST00000514536 DPM3Q9P2X0 92 aa11.28□□□□□ -0.6
USP46-209ENST00000514536 PSG11Q9UQ72 335 aa11.28□□□□□ -0.6
USP46-209ENST00000514536 METTL21EPA6NDL7 271 aa11.28□□□□□ -0.6
USP46-209ENST00000514536 BUB1B-PAK6H3BSN5 160 aa11.28□□□□□ -0.6
USP46-209ENST00000514536 J3QR06 171 aa11.28□□□□□ -0.6
USP46-209ENST00000514536 F2RL2O00254 374 aa11.28□□□□□ -0.6
USP46-209ENST00000514536 GPR137BO60478 399 aa11.28□□□□□ -0.6
USP46-209ENST00000514536 NAPSAO96009 420 aa11.28□□□□□ -0.6
USP46-209ENST00000514536 CRYBA1P05813 215 aa11.28□□□□□ -0.6
USP46-209ENST00000514536 RPS19P39019 145 aaKnown RBP11.28□□□□□ -0.6
USP46-209ENST00000514536 GNG10P50151 68 aa11.28□□□□□ -0.6
USP46-209ENST00000514536 LOXL3P58215 753 aa11.28□□□□□ -0.6
USP46-209ENST00000514536 OLFML2AQ68BL7 652 aa11.28□□□□□ -0.6
USP46-209ENST00000514536 SLC16A12Q6ZSM3 486 aa11.28□□□□□ -0.6
USP46-209ENST00000514536 OR52M1Q8NGK5 317 aa11.28□□□□□ -0.6
USP46-209ENST00000514536 OR10R2Q8NGX6 335 aa11.28□□□□□ -0.6
USP46-209ENST00000514536 OR5R1Q8NH85 324 aa11.28□□□□□ -0.6
USP46-209ENST00000514536 SETD6Q8TBK2 473 aa11.28□□□□□ -0.6
USP46-209ENST00000514536 RAB3CQ96E17 227 aa11.28□□□□□ -0.6
USP46-209ENST00000514536 HDHD3Q9BSH5 251 aaPredicted RBP11.28□□□□□ -0.6
USP46-209ENST00000514536 MMP28Q9H239 520 aa11.28□□□□□ -0.6
USP46-209ENST00000514536 RAB9BQ9NP90 201 aa11.28□□□□□ -0.6
USP46-209ENST00000514536 GFOD1Q9NXC2 390 aa11.28□□□□□ -0.6
USP46-209ENST00000514536 A0A1W2PPE3 182 aa11.27□□□□□ -0.61
USP46-209ENST00000514536 TMEM89A2RUT3 159 aa11.27□□□□□ -0.61
USP46-209ENST00000514536 LEUTXA8MZ59 168 aa11.27□□□□□ -0.61
USP46-209ENST00000514536 RAB27BO00194 218 aa11.27□□□□□ -0.61
USP46-209ENST00000514536 HKR1P10072 659 aa11.27□□□□□ -0.61
USP46-209ENST00000514536 LY6EQ16553 131 aa11.27□□□□□ -0.61
USP46-209ENST00000514536 AANATQ16613 207 aa11.27□□□□□ -0.61
USP46-209ENST00000514536 LGALS14Q8TCE9 139 aa11.27□□□□□ -0.61
USP46-209ENST00000514536 PIFOQ8TCI5 191 aa11.27□□□□□ -0.61
USP46-209ENST00000514536 CMSS1Q9BQ75 279 aaKnown RBP11.27□□□□□ -0.61
USP46-209ENST00000514536 RIMS4Q9H426 269 aaPredicted RBP11.27□□□□□ -0.61
USP46-209ENST00000514536 VPREB3Q9UKI3 123 aa11.27□□□□□ -0.61
USP46-209ENST00000514536 KCNK7Q9Y2U2 307 aa11.27□□□□□ -0.61
USP46-209ENST00000514536 A0A075B6Q4 140 aa11.26□□□□□ -0.61
USP46-209ENST00000514536 VGLL3A8MV65 326 aa11.26□□□□□ -0.61
USP46-209ENST00000514536 TFAP2AP05549 437 aa11.26□□□□□ -0.61
USP46-209ENST00000514536 GNB3P16520 340 aa11.26□□□□□ -0.61
USP46-209ENST00000514536 VBP1P61758 197 aa11.26□□□□□ -0.61
USP46-209ENST00000514536 NCS1P62166 190 aa11.26□□□□□ -0.61
USP46-209ENST00000514536 ZNF880Q6PDB4 577 aa11.26□□□□□ -0.61
USP46-209ENST00000514536 Q6ZPA2 131 aa11.26□□□□□ -0.61
USP46-209ENST00000514536 OR52L2PQ8NGH6 319 aa11.26□□□□□ -0.61
USP46-209ENST00000514536 OR10V1Q8NGI7 309 aa11.26□□□□□ -0.61
USP46-209ENST00000514536 OR5H6Q8NGV6 325 aa11.26□□□□□ -0.61
USP46-209ENST00000514536 CREB3L1Q96BA8 519 aa11.26□□□□□ -0.61
USP46-209ENST00000514536 NAA50Q9GZZ1 169 aaKnown RBP11.26□□□□□ -0.61
USP46-209ENST00000514536 OR2S2Q9NQN1 319 aa11.26□□□□□ -0.61
USP46-209ENST00000514536 ABCB10Q9NRK6 738 aa11.26□□□□□ -0.61
USP46-209ENST00000514536 GNG12Q9UBI6 72 aa11.26□□□□□ -0.61
USP46-209ENST00000514536 TRBV6-6A0A0A6YYG2 114 aa11.25□□□□□ -0.61
USP46-209ENST00000514536 LY6LH3BQJ8 138 aa11.25□□□□□ -0.61
USP46-209ENST00000514536 CEACAM3P40198 252 aa11.25□□□□□ -0.61
USP46-209ENST00000514536 ALDH3B2P48448 385 aa11.25□□□□□ -0.61
USP46-209ENST00000514536 SERPINB10P48595 397 aa11.25□□□□□ -0.61
USP46-209ENST00000514536 HMGN3Q15651 99 aa11.25□□□□□ -0.61
USP46-209ENST00000514536 TPTE2P1Q5T6R2 138 aa11.25□□□□□ -0.61
USP46-209ENST00000514536 GPR107Q5VW38 600 aa11.25□□□□□ -0.61
USP46-209ENST00000514536 ZNF554Q86TJ5 538 aa11.25□□□□□ -0.61
USP46-209ENST00000514536 ANKRD13BQ86YJ7 626 aa11.25□□□□□ -0.61
USP46-209ENST00000514536 CD3GP09693 182 aa11.24□□□□□ -0.61
USP46-209ENST00000514536 TMEM30BQ3MIR4 351 aa11.24□□□□□ -0.61
USP46-209ENST00000514536 C12orf54Q6X4T0 127 aa11.24□□□□□ -0.61
USP46-209ENST00000514536 GPR141Q7Z602 305 aa11.24□□□□□ -0.61
USP46-209ENST00000514536 OR10X1Q8NGY0 326 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms