RNA–Protein interactions for RNA: ENST00000513678.5

MATR3-222, Transcript of matrin 3, human

TSL 2

Gene MATR3, Length 444 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-222	ENST00000513678	NRG4	Q8WWG1	115 aa		13.36	□□□□□ -0.27
MATR3-222	ENST00000513678	PHF21A	Q96BD5	680 aa		13.36	□□□□□ -0.27
MATR3-222	ENST00000513678	CST11	Q9H112	138 aa		13.36	□□□□□ -0.27
MATR3-222	ENST00000513678	DUSP21	Q9H596	190 aa		13.36	□□□□□ -0.27
MATR3-222	ENST00000513678	MOB4	Q9Y3A3	225 aa		13.36	□□□□□ -0.27
MATR3-222	ENST00000513678	SH2D7	A6NKC9	451 aa	Predicted RBP	13.35	□□□□□ -0.27
MATR3-222	ENST00000513678		H0YHG0	523 aa		13.35	□□□□□ -0.27
MATR3-222	ENST00000513678	IGHV3-7	P01780	117 aa		13.35	□□□□□ -0.27
MATR3-222	ENST00000513678	SNRNP70	P08621	437 aa	Known RBP	13.35	□□□□□ -0.27
MATR3-222	ENST00000513678	FUT3	P21217	361 aa		13.35	□□□□□ -0.27
MATR3-222	ENST00000513678	AQP4	P55087	323 aa		13.35	□□□□□ -0.27
MATR3-222	ENST00000513678	DIAPH2-AS1	Q14236	149 aa		13.35	□□□□□ -0.27
MATR3-222	ENST00000513678	LTC4S	Q16873	150 aa		13.35	□□□□□ -0.27
MATR3-222	ENST00000513678	C1orf100	Q5SVJ3	147 aa		13.35	□□□□□ -0.27
MATR3-222	ENST00000513678	C6orf183	Q5T699	404 aa		13.35	□□□□□ -0.27
MATR3-222	ENST00000513678	STEAP3	Q658P3	488 aa		13.35	□□□□□ -0.27
MATR3-222	ENST00000513678	SIGIRR	Q6IA17	410 aa		13.35	□□□□□ -0.27
MATR3-222	ENST00000513678	DRAM1	Q8N682	238 aa		13.35	□□□□□ -0.27
MATR3-222	ENST00000513678	ST6GALNAC6	Q969X2	333 aa		13.35	□□□□□ -0.27
MATR3-222	ENST00000513678	ANKRD60	Q9BZ19	345 aa		13.35	□□□□□ -0.27
MATR3-222	ENST00000513678	SELENOI	Q9C0D9	397 aa		13.35	□□□□□ -0.27
MATR3-222	ENST00000513678	NECAP2	Q9NVZ3	263 aa		13.35	□□□□□ -0.27
MATR3-222	ENST00000513678	ETAA1	Q9NY74	926 aa		13.35	□□□□□ -0.27
MATR3-222	ENST00000513678	TSSC4	Q9Y5U2	329 aa	Predicted RBP	13.35	□□□□□ -0.27
MATR3-222	ENST00000513678		A0A1W2PRX2	142 aa		13.34	□□□□□ -0.27
MATR3-222	ENST00000513678	C12orf77	C9JDV5	145 aa		13.34	□□□□□ -0.27
MATR3-222	ENST00000513678	PTGES3L	E9PB15	166 aa		13.34	□□□□□ -0.27
MATR3-222	ENST00000513678	CCRL2	O00421	344 aa		13.34	□□□□□ -0.27
MATR3-222	ENST00000513678	SDCBP	O00560	298 aa	Predicted RBP	13.34	□□□□□ -0.27
MATR3-222	ENST00000513678	HSD17B6	O14756	317 aa		13.34	□□□□□ -0.27
MATR3-222	ENST00000513678	CRTAP	O75718	401 aa	Predicted RBP	13.34	□□□□□ -0.27
MATR3-222	ENST00000513678	GAPDH	P04406	335 aa	Known RBP	13.34	□□□□□ -0.27
MATR3-222	ENST00000513678	MYF6	P23409	242 aa		13.34	□□□□□ -0.27
MATR3-222	ENST00000513678	GNG10	P50151	68 aa		13.34	□□□□□ -0.27
MATR3-222	ENST00000513678	ZNF137P	P52743	207 aa		13.34	□□□□□ -0.27
MATR3-222	ENST00000513678	GABPB1	Q06547	395 aa	Predicted RBP	13.34	□□□□□ -0.27
MATR3-222	ENST00000513678	C10orf99	Q6UWK7	81 aa		13.34	□□□□□ -0.27
MATR3-222	ENST00000513678	CENPV	Q7Z7K6	275 aa	Predicted RBP	13.34	□□□□□ -0.27
MATR3-222	ENST00000513678	LRRTM1	Q86UE6	522 aa		13.34	□□□□□ -0.27
MATR3-222	ENST00000513678	IZUMO1	Q8IYV9	350 aa		13.34	□□□□□ -0.27
MATR3-222	ENST00000513678	BANF2	Q9H503	90 aa		13.34	□□□□□ -0.27
MATR3-222	ENST00000513678	ISYNA1	Q9NPH2	558 aa		13.34	□□□□□ -0.27
MATR3-222	ENST00000513678	MBNL3	Q9NUK0	354 aa	Known RBP	13.34	□□□□□ -0.27
MATR3-222	ENST00000513678	TPRKB	Q9Y3C4	175 aa		13.34	□□□□□ -0.27
MATR3-222	ENST00000513678	PEX16	Q9Y5Y5	336 aa		13.34	□□□□□ -0.27
MATR3-222	ENST00000513678	SPINT2	O43291	252 aa		13.33	□□□□□ -0.28
MATR3-222	ENST00000513678	PDCD6	O75340	191 aa		13.33	□□□□□ -0.28
MATR3-222	ENST00000513678	UCHL1	P09936	223 aa		13.33	□□□□□ -0.28
MATR3-222	ENST00000513678	TPBG	Q13641	420 aa		13.33	□□□□□ -0.28
MATR3-222	ENST00000513678	INSL4	Q14641	139 aa		13.33	□□□□□ -0.28
MATR3-222	ENST00000513678	SYT6	Q5T7P8	510 aa	Predicted RBP	13.33	□□□□□ -0.28
MATR3-222	ENST00000513678	GLT8D1	Q68CQ7	371 aa		13.33	□□□□□ -0.28
MATR3-222	ENST00000513678	SLC25A48	Q6ZT89	311 aa	Known RBP	13.33	□□□□□ -0.28
MATR3-222	ENST00000513678	C5orf56	Q8N8D9	126 aa		13.33	□□□□□ -0.28
MATR3-222	ENST00000513678	ZNF439	Q8NDP4	499 aa		13.33	□□□□□ -0.28
MATR3-222	ENST00000513678	OR4X2	Q8NGF9	303 aa		13.33	□□□□□ -0.28
MATR3-222	ENST00000513678	CCDC107	Q8WV48	283 aa		13.33	□□□□□ -0.28
MATR3-222	ENST00000513678	AURKAIP1	Q9NWT8	199 aa	Predicted RBP	13.33	□□□□□ -0.28
MATR3-222	ENST00000513678	TRAPPC2L	Q9UL33	140 aa		13.33	□□□□□ -0.28
MATR3-222	ENST00000513678	IGHV1-3	A0A0C4DH29	117 aa		13.32	□□□□□ -0.28
MATR3-222	ENST00000513678	TCRBV4S1A1T	A0A5B7	111 aa		13.32	□□□□□ -0.28
MATR3-222	ENST00000513678	TXNL1	O43396	289 aa		13.32	□□□□□ -0.28
MATR3-222	ENST00000513678	PF4V1	P10720	104 aa		13.32	□□□□□ -0.28
MATR3-222	ENST00000513678	TMEM11	P17152	192 aa		13.32	□□□□□ -0.28
MATR3-222	ENST00000513678	SRM	P19623	302 aa		13.32	□□□□□ -0.28
MATR3-222	ENST00000513678	IL3RA	P26951	378 aa		13.32	□□□□□ -0.28
MATR3-222	ENST00000513678	HSD17B12	Q53GQ0	312 aa		13.32	□□□□□ -0.28
MATR3-222	ENST00000513678	FAM27D1	Q5T7N8	215 aa		13.32	□□□□□ -0.28
MATR3-222	ENST00000513678		Q8N6K4	173 aa		13.32	□□□□□ -0.28
MATR3-222	ENST00000513678	SGCD	Q92629	289 aa		13.32	□□□□□ -0.28
MATR3-222	ENST00000513678	TMED9	Q9BVK6	235 aa		13.32	□□□□□ -0.28
MATR3-222	ENST00000513678	VCX3B	Q9H321	246 aa		13.32	□□□□□ -0.28
MATR3-222	ENST00000513678		A0A1W2PPE3	182 aa		13.31	□□□□□ -0.28
MATR3-222	ENST00000513678	SLC22A1	O15245	554 aa		13.31	□□□□□ -0.28
MATR3-222	ENST00000513678	IGKV1D-33	P01593	117 aa		13.31	□□□□□ -0.28
MATR3-222	ENST00000513678	IGKV1-33	P01594	117 aa		13.31	□□□□□ -0.28
MATR3-222	ENST00000513678	HBZ	P02008	142 aa		13.31	□□□□□ -0.28
MATR3-222	ENST00000513678	IGLL1	P15814	213 aa		13.31	□□□□□ -0.28
MATR3-222	ENST00000513678	RCC1	P18754	421 aa	Predicted RBP	13.31	□□□□□ -0.28
MATR3-222	ENST00000513678	CD33	P20138	364 aa		13.31	□□□□□ -0.28
MATR3-222	ENST00000513678	CD1B	P29016	333 aa		13.31	□□□□□ -0.28
MATR3-222	ENST00000513678	RPS27A	P62979	156 aa	Known RBP	13.31	□□□□□ -0.28
MATR3-222	ENST00000513678	MED22	Q15528	200 aa		13.31	□□□□□ -0.28
MATR3-222	ENST00000513678	TRAM1	Q15629	374 aa		13.31	□□□□□ -0.28
MATR3-222	ENST00000513678	LY6G6F	Q5SQ64	297 aa		13.31	□□□□□ -0.28
MATR3-222	ENST00000513678	FOXB2	Q5VYV0	432 aa		13.31	□□□□□ -0.28
MATR3-222	ENST00000513678	CEACAM19	Q7Z692	300 aa		13.31	□□□□□ -0.28
MATR3-222	ENST00000513678	OR4K15	Q8NH41	348 aa		13.31	□□□□□ -0.28
MATR3-222	ENST00000513678	KCNG3	Q8TAE7	436 aa		13.31	□□□□□ -0.28
MATR3-222	ENST00000513678	RTN4IP1	Q8WWV3	396 aa	Predicted RBP	13.31	□□□□□ -0.28
MATR3-222	ENST00000513678	UFD1	Q92890	307 aa		13.31	□□□□□ -0.28
MATR3-222	ENST00000513678	TM2D1	Q9BX74	207 aa		13.31	□□□□□ -0.28
MATR3-222	ENST00000513678	RGS10	O43665	173 aa		13.3	□□□□□ -0.28
MATR3-222	ENST00000513678	IGHG2	P01859	326 aa		13.3	□□□□□ -0.28
MATR3-222	ENST00000513678	VSIG8	P0DPA2	414 aa		13.3	□□□□□ -0.28
MATR3-222	ENST00000513678	CRHBP	P24387	322 aa		13.3	□□□□□ -0.28
MATR3-222	ENST00000513678	PSMA1	P25786	263 aa	Known RBP	13.3	□□□□□ -0.28
MATR3-222	ENST00000513678	CHAT	P28329	748 aa		13.3	□□□□□ -0.28
MATR3-222	ENST00000513678	HSPA13	P48723	471 aa		13.3	□□□□□ -0.28
MATR3-222	ENST00000513678	QRFP	P83859	136 aa		13.3	□□□□□ -0.28

Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms