RNA–Protein interactions for RNA: ENST00000511859.5

RNF4-216, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-216ENST00000511859 CGB3P0DN86 165 aa8.93□□□□□ -0.98
RNF4-216ENST00000511859 CGB7P0DN87 165 aa8.93□□□□□ -0.98
RNF4-216ENST00000511859 PRKACAP17612 351 aa8.93□□□□□ -0.98
RNF4-216ENST00000511859 BCL3P20749 454 aa8.93□□□□□ -0.98
RNF4-216ENST00000511859 PPIFP30405 207 aaKnown RBP8.93□□□□□ -0.98
RNF4-216ENST00000511859 SOX6P35712 828 aa8.93□□□□□ -0.98
RNF4-216ENST00000511859 MAP2K4P45985 399 aa8.93□□□□□ -0.98
RNF4-216ENST00000511859 ZNF816Q0VGE8 651 aaPredicted RBP8.93□□□□□ -0.98
RNF4-216ENST00000511859 BCL2L15Q5TBC7 163 aa8.93□□□□□ -0.98
RNF4-216ENST00000511859 IZUMO1Q8IYV9 350 aa8.93□□□□□ -0.98
RNF4-216ENST00000511859 OR8H1Q8NGG4 311 aa8.93□□□□□ -0.98
RNF4-216ENST00000511859 OR10X1Q8NGY0 326 aa8.93□□□□□ -0.98
RNF4-216ENST00000511859 S1PR3Q99500 378 aa8.93□□□□□ -0.98
RNF4-216ENST00000511859 KLK15Q9H2R5 256 aa8.93□□□□□ -0.98
RNF4-216ENST00000511859 PLEKHA1Q9HB21 404 aa8.93□□□□□ -0.98
RNF4-216ENST00000511859 HMG20AQ9NP66 347 aa8.93□□□□□ -0.98
RNF4-216ENST00000511859 OR52A1Q9UKL2 312 aa8.93□□□□□ -0.98
RNF4-216ENST00000511859 EXOSC1Q9Y3B2 195 aaKnown RBP8.93□□□□□ -0.98
RNF4-216ENST00000511859 DNAH10Q8IVF4 4471 aa8.93□□□□□ -0.98
RNF4-216ENST00000511859 IGHV1-3A0A0C4DH29 117 aa8.92□□□□□ -0.98
RNF4-216ENST00000511859 E9PI62 339 aa8.92□□□□□ -0.98
RNF4-216ENST00000511859 LINC01619G3V211 115 aa8.92□□□□□ -0.98
RNF4-216ENST00000511859 MYL12BO14950 172 aa8.92□□□□□ -0.98
RNF4-216ENST00000511859 SRSF10O75494 262 aaKnown RBP8.92□□□□□ -0.98
RNF4-216ENST00000511859 LY6G6CO95867 125 aa8.92□□□□□ -0.98
RNF4-216ENST00000511859 HTR1AP08908 422 aa8.92□□□□□ -0.98
RNF4-216ENST00000511859 CCL1P22362 96 aa8.92□□□□□ -0.98
RNF4-216ENST00000511859 CNTFRP26992 372 aa8.92□□□□□ -0.98
RNF4-216ENST00000511859 RBP2P50120 134 aa8.92□□□□□ -0.98
RNF4-216ENST00000511859 RAB9AP51151 201 aa8.92□□□□□ -0.98
RNF4-216ENST00000511859 GTF2A1P52655 376 aaPredicted RBP8.92□□□□□ -0.98
RNF4-216ENST00000511859 ATP1B3P54709 279 aa8.92□□□□□ -0.98
RNF4-216ENST00000511859 CHST4Q8NCG5 386 aa8.92□□□□□ -0.98
RNF4-216ENST00000511859 PELI1Q96FA3 418 aa8.92□□□□□ -0.98
RNF4-216ENST00000511859 MRPL48Q96GC5 212 aaKnown RBP8.92□□□□□ -0.98
RNF4-216ENST00000511859 HSPB9Q9BQS6 159 aa8.92□□□□□ -0.98
RNF4-216ENST00000511859 JAM3Q9BX67 310 aa8.92□□□□□ -0.98
RNF4-216ENST00000511859 NCOR1P1Q9H4R4 102 aa8.92□□□□□ -0.98
RNF4-216ENST00000511859 DUSP21Q9H596 190 aa8.92□□□□□ -0.98
RNF4-216ENST00000511859 LINC00574Q9H8X3 128 aa8.92□□□□□ -0.98
RNF4-216ENST00000511859 BLOC1S6Q9UL45 172 aa8.92□□□□□ -0.98
RNF4-216ENST00000511859 GSTK1Q9Y2Q3 226 aa8.92□□□□□ -0.98
RNF4-216ENST00000511859 SNX5Q9Y5X3 404 aa8.92□□□□□ -0.98
RNF4-216ENST00000511859 R4GMQ9 66 aa8.92□□□□□ -0.98
RNF4-216ENST00000511859 PNMA8CA0A1B0GUJ8 204 aa8.91□□□□□ -0.98
RNF4-216ENST00000511859 HSD17B6O14756 317 aa8.91□□□□□ -0.98
RNF4-216ENST00000511859 SULT1C4O75897 302 aa8.91□□□□□ -0.98
RNF4-216ENST00000511859 MOSP00540 346 aa8.91□□□□□ -0.98
RNF4-216ENST00000511859 IGLV1-40P01703 118 aa8.91□□□□□ -0.98
RNF4-216ENST00000511859 IGHV3-7P01780 117 aa8.91□□□□□ -0.98
RNF4-216ENST00000511859 CD1BP29016 333 aa8.91□□□□□ -0.98
RNF4-216ENST00000511859 SNU13P55769 128 aaKnown RBP8.91□□□□□ -0.98
RNF4-216ENST00000511859 PITPNAQ00169 270 aa8.91□□□□□ -0.98
RNF4-216ENST00000511859 XAF1Q6GPH4 301 aa8.91□□□□□ -0.98
RNF4-216ENST00000511859 FAM53AQ6NSI3 398 aaPredicted RBP8.91□□□□□ -0.98
RNF4-216ENST00000511859 TMPRSS11AQ6ZMR5 421 aa8.91□□□□□ -0.98
RNF4-216ENST00000511859 CATSPERDQ86XM0 798 aa8.91□□□□□ -0.98
RNF4-216ENST00000511859 PRSS35Q8N3Z0 413 aa8.91□□□□□ -0.98
RNF4-216ENST00000511859 ZFP41Q8N8Y5 198 aa8.91□□□□□ -0.98
RNF4-216ENST00000511859 CCDC54Q8NEL0 328 aa8.91□□□□□ -0.98
RNF4-216ENST00000511859 DNAAF1Q8NEP3 725 aa8.91□□□□□ -0.98
RNF4-216ENST00000511859 OR10A7Q8NGE5 316 aa8.91□□□□□ -0.98
RNF4-216ENST00000511859 ARPC1AQ92747 370 aa8.91□□□□□ -0.98
RNF4-216ENST00000511859 C10orf35Q96D05 121 aa8.91□□□□□ -0.98
RNF4-216ENST00000511859 COQ2Q96H96 371 aa8.91□□□□□ -0.98
RNF4-216ENST00000511859 OR5B12Q96R08 314 aa8.91□□□□□ -0.98
RNF4-216ENST00000511859 CHST5Q9GZS9 411 aa8.91□□□□□ -0.98
RNF4-216ENST00000511859 COMMD4Q9H0A8 199 aa8.91□□□□□ -0.98
RNF4-216ENST00000511859 IDI2-AS1Q9NZ38 188 aa8.91□□□□□ -0.98
RNF4-216ENST00000511859 MRPS28Q9Y2Q9 187 aaKnown RBP8.91□□□□□ -0.98
RNF4-216ENST00000511859 LALBAP00709 142 aa8.9□□□□□ -0.98
RNF4-216ENST00000511859 IGLV1-51P01701 117 aa8.9□□□□□ -0.98
RNF4-216ENST00000511859 CALCBP10092 127 aa8.9□□□□□ -0.98
RNF4-216ENST00000511859 ZNF44P15621 663 aa8.9□□□□□ -0.98
RNF4-216ENST00000511859 ARSBP15848 533 aa8.9□□□□□ -0.98
RNF4-216ENST00000511859 GBX2P52951 348 aaPredicted RBP8.9□□□□□ -0.98
RNF4-216ENST00000511859 SLURP1P55000 103 aa8.9□□□□□ -0.98
RNF4-216ENST00000511859 NANOS3P60323 173 aaKnown RBP8.9□□□□□ -0.98
RNF4-216ENST00000511859 GABARAPL2P60520 117 aa8.9□□□□□ -0.98
RNF4-216ENST00000511859 KCTD20Q7Z5Y7 419 aa8.9□□□□□ -0.98
RNF4-216ENST00000511859 SYS1Q8N2H4 156 aa8.9□□□□□ -0.98
RNF4-216ENST00000511859 NANOGP1Q8N7R0 232 aa8.9□□□□□ -0.98
RNF4-216ENST00000511859 LEAP2Q969E1 77 aa8.9□□□□□ -0.98
RNF4-216ENST00000511859 ELOVL1Q9BW60 279 aa8.9□□□□□ -0.98
RNF4-216ENST00000511859 TUBA4BQ9H853 241 aa8.9□□□□□ -0.98
RNF4-216ENST00000511859 RHOFQ9HBH0 211 aa8.9□□□□□ -0.98
RNF4-216ENST00000511859 ING3Q9NXR8 418 aa8.9□□□□□ -0.98
RNF4-216ENST00000511859 CALYQ9NYX4 217 aa8.9□□□□□ -0.98
RNF4-216ENST00000511859 ERGIC3Q9Y282 383 aa8.9□□□□□ -0.98
RNF4-216ENST00000511859 IGHV3-72A0A0B4J1Y9 119 aa8.89□□□□□ -0.99
RNF4-216ENST00000511859 FAM90A10PA6NDY2 464 aa8.89□□□□□ -0.99
RNF4-216ENST00000511859 C12orf77C9JDV5 145 aa8.89□□□□□ -0.99
RNF4-216ENST00000511859 NPIPB11E5RHQ5 1161 aa8.89□□□□□ -0.99
RNF4-216ENST00000511859 ARPC1BO15143 372 aaKnown RBP8.89□□□□□ -0.99
RNF4-216ENST00000511859 SYT7O43581 403 aa8.89□□□□□ -0.99
RNF4-216ENST00000511859 IL1AP01583 271 aa8.89□□□□□ -0.99
RNF4-216ENST00000511859 GNG10P50151 68 aa8.89□□□□□ -0.99
RNF4-216ENST00000511859 MTCP1P56278 107 aa8.89□□□□□ -0.99
RNF4-216ENST00000511859 WNT4P56705 351 aa8.89□□□□□ -0.99
RNF4-216ENST00000511859 SCN1BQ07699 218 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms