RNA–Protein interactions for RNA: ENST00000511409.1

TRAPPC11-207, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-207ENST00000511409 VPREB3Q9UKI3 123 aa1.49□□□□□ -2.17
TRAPPC11-207ENST00000511409 FBXL3Q9UKT7 428 aa1.49□□□□□ -2.17
TRAPPC11-207ENST00000511409 ARAP3Q8WWN8 1544 aa1.49□□□□□ -2.17
TRAPPC11-207ENST00000511409 DOCK6Q96HP0 2047 aa1.49□□□□□ -2.17
TRAPPC11-207ENST00000511409 RAB3GAP2Q9H2M9 1393 aa1.48□□□□□ -2.17
TRAPPC11-207ENST00000511409 USP42Q9H9J4 1324 aaKnown RBP1.48□□□□□ -2.17
TRAPPC11-207ENST00000511409 IGHV3OR15-7A0A075B7D8 119 aa1.48□□□□□ -2.17
TRAPPC11-207ENST00000511409 ERICH2A1L162 156 aa1.48□□□□□ -2.17
TRAPPC11-207ENST00000511409 A8MWP6 167 aa1.48□□□□□ -2.17
TRAPPC11-207ENST00000511409 SOX14O95416 240 aa1.48□□□□□ -2.17
TRAPPC11-207ENST00000511409 GP1BAP07359 652 aa1.48□□□□□ -2.17
TRAPPC11-207ENST00000511409 COILP38432 576 aaPredicted RBP1.48□□□□□ -2.17
TRAPPC11-207ENST00000511409 RAB8AP61006 207 aa1.48□□□□□ -2.17
TRAPPC11-207ENST00000511409 ZNF181Q2M3W8 571 aa1.48□□□□□ -2.17
TRAPPC11-207ENST00000511409 KRTAP21-2Q3LI59 83 aa1.48□□□□□ -2.17
TRAPPC11-207ENST00000511409 KRTAP6-3Q3LI67 103 aa1.48□□□□□ -2.17
TRAPPC11-207ENST00000511409 HES3Q5TGS1 186 aa1.48□□□□□ -2.17
TRAPPC11-207ENST00000511409 EBLN2Q6P2I7 272 aa1.48□□□□□ -2.17
TRAPPC11-207ENST00000511409 C17orf78Q8N4C9 275 aa1.48□□□□□ -2.17
TRAPPC11-207ENST00000511409 ZNRF2Q8NHG8 242 aa1.48□□□□□ -2.17
TRAPPC11-207ENST00000511409 RNASEH2CQ8TDP1 164 aaKnown RBP1.48□□□□□ -2.17
TRAPPC11-207ENST00000511409 GPR119Q8TDV5 335 aa1.48□□□□□ -2.17
TRAPPC11-207ENST00000511409 MED10Q9BTT4 135 aa1.48□□□□□ -2.17
TRAPPC11-207ENST00000511409 HSPE1-MOB4S4R3N1 261 aa1.48□□□□□ -2.17
TRAPPC11-207ENST00000511409 MYO15BQ96JP2 1530 aa1.48□□□□□ -2.17
TRAPPC11-207ENST00000511409 MYO16Q9Y6X6 1858 aa1.48□□□□□ -2.17
TRAPPC11-207ENST00000511409 MAP3K19Q56UN5 1328 aa1.47□□□□□ -2.17
TRAPPC11-207ENST00000511409 IGKV1-12A0A0C4DH73 117 aa1.47□□□□□ -2.17
TRAPPC11-207ENST00000511409 IGSF23A1L1A6 192 aa1.47□□□□□ -2.17
TRAPPC11-207ENST00000511409 HSBP1L1C9JCN9 74 aa1.47□□□□□ -2.17
TRAPPC11-207ENST00000511409 PHYHO14832 338 aa1.47□□□□□ -2.17
TRAPPC11-207ENST00000511409 IGKV1D-12P01611 117 aa1.47□□□□□ -2.17
TRAPPC11-207ENST00000511409 CRYGDP07320 174 aa1.47□□□□□ -2.17
TRAPPC11-207ENST00000511409 FBP1P09467 338 aa1.47□□□□□ -2.17
TRAPPC11-207ENST00000511409 OR4A8P0C604 315 aa1.47□□□□□ -2.17
TRAPPC11-207ENST00000511409 PVALBP20472 110 aaPredicted RBP1.47□□□□□ -2.17
TRAPPC11-207ENST00000511409 CSRP1P21291 193 aaKnown RBP1.47□□□□□ -2.17
TRAPPC11-207ENST00000511409 GADD45AP24522 165 aa1.47□□□□□ -2.17
TRAPPC11-207ENST00000511409 PPP1CCP36873 323 aaKnown RBP1.47□□□□□ -2.17
TRAPPC11-207ENST00000511409 BSPH1Q075Z2 132 aa1.47□□□□□ -2.17
TRAPPC11-207ENST00000511409 PDK2Q15119 407 aa1.47□□□□□ -2.17
TRAPPC11-207ENST00000511409 OR8G1Q15617 311 aa1.47□□□□□ -2.17
TRAPPC11-207ENST00000511409 SPIN4Q56A73 249 aa1.47□□□□□ -2.17
TRAPPC11-207ENST00000511409 CENPWQ5EE01 88 aa1.47□□□□□ -2.17
TRAPPC11-207ENST00000511409 ACSBG2Q5FVE4 666 aa1.47□□□□□ -2.17
TRAPPC11-207ENST00000511409 RBM48Q5RL73 367 aaKnown RBP1.47□□□□□ -2.17
TRAPPC11-207ENST00000511409 HENMT1Q5T8I9 393 aaKnown RBP1.47□□□□□ -2.17
TRAPPC11-207ENST00000511409 SPNS3Q6ZMD2 512 aa1.47□□□□□ -2.17
TRAPPC11-207ENST00000511409 DOLPP1Q86YN1 238 aa1.47□□□□□ -2.17
TRAPPC11-207ENST00000511409 SELENOHQ8IZQ5 122 aaKnown RBP1.47□□□□□ -2.17
TRAPPC11-207ENST00000511409 DNAAF3Q8N9W5 541 aa1.47□□□□□ -2.17
TRAPPC11-207ENST00000511409 CFAP53Q96M91 514 aa1.47□□□□□ -2.17
TRAPPC11-207ENST00000511409 FAM210AQ96ND0 272 aa1.47□□□□□ -2.17
TRAPPC11-207ENST00000511409 SLC19A3Q9BZV2 496 aa1.47□□□□□ -2.17
TRAPPC11-207ENST00000511409 ASCL3Q9NQ33 180 aa1.47□□□□□ -2.17
TRAPPC11-207ENST00000511409 CEP170Q5SW79 1584 aa1.47□□□□□ -2.17
TRAPPC11-207ENST00000511409 BRD4O60885 1362 aaPredicted RBP1.47□□□□□ -2.17
TRAPPC11-207ENST00000511409 LTBP2Q14767 1821 aa1.46□□□□□ -2.18
TRAPPC11-207ENST00000511409 LOC102725191A0A1B0GVB3 256 aa1.46□□□□□ -2.18
TRAPPC11-207ENST00000511409 ERICH4A6NGS2 130 aa1.46□□□□□ -2.18
TRAPPC11-207ENST00000511409 C17orf98A8MV24 154 aa1.46□□□□□ -2.18
TRAPPC11-207ENST00000511409 J3QLI3 93 aa1.46□□□□□ -2.18
TRAPPC11-207ENST00000511409 LIN7AO14910 233 aaPredicted RBP1.46□□□□□ -2.18
TRAPPC11-207ENST00000511409 DENRO43583 198 aaKnown RBP1.46□□□□□ -2.18
TRAPPC11-207ENST00000511409 MPZL2O60487 215 aa1.46□□□□□ -2.18
TRAPPC11-207ENST00000511409 UGT2B11O75310 529 aa1.46□□□□□ -2.18
TRAPPC11-207ENST00000511409 DEDDO75618 318 aa1.46□□□□□ -2.18
TRAPPC11-207ENST00000511409 ASS1P00966 412 aaKnown RBP1.46□□□□□ -2.18
TRAPPC11-207ENST00000511409 RD3LP0DJH9 198 aa1.46□□□□□ -2.18
TRAPPC11-207ENST00000511409 CTSEP14091 401 aa1.46□□□□□ -2.18
TRAPPC11-207ENST00000511409 CPMP14384 443 aa1.46□□□□□ -2.18
TRAPPC11-207ENST00000511409 ADORA1P30542 326 aa1.46□□□□□ -2.18
TRAPPC11-207ENST00000511409 KDELR2P33947 212 aa1.46□□□□□ -2.18
TRAPPC11-207ENST00000511409 FUSP35637 526 aaKnown RBP eCLIP1.46□□□□□ -2.18
TRAPPC11-207ENST00000511409 PSMD8P48556 350 aa1.46□□□□□ -2.18
TRAPPC11-207ENST00000511409 AKR1C2P52895 323 aa1.46□□□□□ -2.18
TRAPPC11-207ENST00000511409 C1QTNF8P60827 252 aa1.46□□□□□ -2.18
TRAPPC11-207ENST00000511409 GTF2BQ00403 316 aa1.46□□□□□ -2.18
TRAPPC11-207ENST00000511409 XRCC4Q13426 336 aa1.46□□□□□ -2.18
TRAPPC11-207ENST00000511409 TMED1Q13445 227 aa1.46□□□□□ -2.18
TRAPPC11-207ENST00000511409 ZBTB6Q15916 424 aa1.46□□□□□ -2.18
TRAPPC11-207ENST00000511409 TMEM176BQ3YBM2 270 aaPredicted RBP1.46□□□□□ -2.18
TRAPPC11-207ENST00000511409 XKRXQ6PP77 449 aa1.46□□□□□ -2.18
TRAPPC11-207ENST00000511409 CRLF3Q8IUI8 442 aa1.46□□□□□ -2.18
TRAPPC11-207ENST00000511409 ZNF567Q8N184 647 aa1.46□□□□□ -2.18
TRAPPC11-207ENST00000511409 C2orf73Q8N5S3 287 aaPredicted RBP1.46□□□□□ -2.18
TRAPPC11-207ENST00000511409 OR10P1Q8NGE3 313 aa1.46□□□□□ -2.18
TRAPPC11-207ENST00000511409 DYNC2LI1Q8TCX1 351 aa1.46□□□□□ -2.18
TRAPPC11-207ENST00000511409 CD200R1Q8TD46 325 aa1.46□□□□□ -2.18
TRAPPC11-207ENST00000511409 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP1.46□□□□□ -2.18
TRAPPC11-207ENST00000511409 HBEGFQ99075 208 aa1.46□□□□□ -2.18
TRAPPC11-207ENST00000511409 CHST5Q9GZS9 411 aa1.46□□□□□ -2.18
TRAPPC11-207ENST00000511409 AICDAQ9GZX7 198 aa1.46□□□□□ -2.18
TRAPPC11-207ENST00000511409 C11orf49Q9H6J7 331 aa1.46□□□□□ -2.18
TRAPPC11-207ENST00000511409 TMEM216Q9P0N5 145 aa1.46□□□□□ -2.18
TRAPPC11-207ENST00000511409 SCML1Q9UN30 329 aa1.46□□□□□ -2.18
TRAPPC11-207ENST00000511409 ZNF337Q9Y3M9 751 aa1.46□□□□□ -2.18
TRAPPC11-207ENST00000511409 OR51B4Q9Y5P0 310 aa1.46□□□□□ -2.18
TRAPPC11-207ENST00000511409 DNMT1P26358 1616 aaKnown RBP1.46□□□□□ -2.18
TRAPPC11-207ENST00000511409 CRB1P82279 1406 aa1.46□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms