RNA–Protein interactions for RNA: ENST00000510545.5

CLDND1-222, Transcript of claudin domain containing 1, human

APPRIS P1 TSL 5 BASIC

Gene CLDND1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLDND1-222	ENST00000510545	PRSS54	Q6PEW0	395 aa		13.55	□□□□□ -0.24
CLDND1-222	ENST00000510545	MEX3B	Q6ZN04	569 aa	Known RBP	13.55	□□□□□ -0.24
CLDND1-222	ENST00000510545	FAM185A	Q8N0U4	392 aa		13.55	□□□□□ -0.24
CLDND1-222	ENST00000510545	TPRX1	Q8N7U7	411 aa		13.55	□□□□□ -0.24
CLDND1-222	ENST00000510545	OR10Z1	Q8NGY1	313 aa		13.55	□□□□□ -0.24
CLDND1-222	ENST00000510545	SPDEF	O95238	335 aa		13.54	□□□□□ -0.24
CLDND1-222	ENST00000510545	IFNA21	P01568	189 aa		13.54	□□□□□ -0.24
CLDND1-222	ENST00000510545	IGLV2-14	P01704	120 aa		13.54	□□□□□ -0.24
CLDND1-222	ENST00000510545	HEXA	P06865	529 aa		13.54	□□□□□ -0.24
CLDND1-222	ENST00000510545	PRDX2	P32119	198 aa		13.54	□□□□□ -0.24
CLDND1-222	ENST00000510545	S100A10	P60903	97 aa		13.54	□□□□□ -0.24
CLDND1-222	ENST00000510545	SNTB1	Q13884	538 aa	Known RBP	13.54	□□□□□ -0.24
CLDND1-222	ENST00000510545	TOR2A	Q5JU69	321 aa		13.54	□□□□□ -0.24
CLDND1-222	ENST00000510545	FAM209A	Q5JX71	171 aa		13.54	□□□□□ -0.24
CLDND1-222	ENST00000510545	FAM201A	Q5SY85	155 aa		13.54	□□□□□ -0.24
CLDND1-222	ENST00000510545	SLC51B	Q86UW2	128 aa		13.54	□□□□□ -0.24
CLDND1-222	ENST00000510545	FOXRED2	Q8IWF2	684 aa		13.54	□□□□□ -0.24
CLDND1-222	ENST00000510545	LGI3	Q8N145	548 aa		13.54	□□□□□ -0.24
CLDND1-222	ENST00000510545	OR1S1	Q8NH92	325 aa		13.54	□□□□□ -0.24
CLDND1-222	ENST00000510545	OR1L1	Q8NH94	360 aa		13.54	□□□□□ -0.24
CLDND1-222	ENST00000510545	TMEM222	Q9H0R3	208 aa		13.54	□□□□□ -0.24
CLDND1-222	ENST00000510545	MEX3A	A1L020	520 aa	Known RBP	13.54	□□□□□ -0.24
CLDND1-222	ENST00000510545	C12orf77	C9JDV5	145 aa		13.54	□□□□□ -0.24
CLDND1-222	ENST00000510545	BCL2L11	O43521	198 aa		13.54	□□□□□ -0.24
CLDND1-222	ENST00000510545	ZNF737	O75373	536 aa		13.54	□□□□□ -0.24
CLDND1-222	ENST00000510545	PGLYRP1	O75594	196 aa	Predicted RBP	13.54	□□□□□ -0.24
CLDND1-222	ENST00000510545	B3GALNT1	O75752	331 aa		13.54	□□□□□ -0.24
CLDND1-222	ENST00000510545	LHB	P01229	141 aa		13.54	□□□□□ -0.24
CLDND1-222	ENST00000510545	GLIPR1	P48060	266 aa		13.54	□□□□□ -0.24
CLDND1-222	ENST00000510545	SLC35G3	Q8N808	338 aa		13.54	□□□□□ -0.24
CLDND1-222	ENST00000510545	KDF1	Q8NAX2	398 aa	Predicted RBP	13.54	□□□□□ -0.24
CLDND1-222	ENST00000510545	INO80E	Q8NBZ0	244 aa	Predicted RBP	13.54	□□□□□ -0.24
CLDND1-222	ENST00000510545	RLN2	P04090	185 aa		13.53	□□□□□ -0.24
CLDND1-222	ENST00000510545	CA7	P43166	264 aa		13.53	□□□□□ -0.24
CLDND1-222	ENST00000510545	GABRA2	P47869	451 aa		13.53	□□□□□ -0.24
CLDND1-222	ENST00000510545	SELENOV	P59797	346 aa		13.53	□□□□□ -0.24
CLDND1-222	ENST00000510545	ADIPOQ	Q15848	244 aa		13.53	□□□□□ -0.24
CLDND1-222	ENST00000510545	CLLU1	Q5K131	121 aa		13.53	□□□□□ -0.24
CLDND1-222	ENST00000510545	TMEM268	Q5VZI3	342 aa		13.53	□□□□□ -0.24
CLDND1-222	ENST00000510545	OR10V1	Q8NGI7	309 aa		13.53	□□□□□ -0.24
CLDND1-222	ENST00000510545	LILRB1	Q8NHL6	650 aa	Predicted RBP	13.53	□□□□□ -0.24
CLDND1-222	ENST00000510545	CNTNAP3B	Q96NU0	1288 aa		13.53	□□□□□ -0.24
CLDND1-222	ENST00000510545	CNTNAP3	Q9BZ76	1288 aa		13.53	□□□□□ -0.24
CLDND1-222	ENST00000510545	GSX2	Q9BZM3	304 aa		13.53	□□□□□ -0.24
CLDND1-222	ENST00000510545	HSPA12A	O43301	675 aa		13.52	□□□□□ -0.24
CLDND1-222	ENST00000510545	GATA4	P43694	442 aa		13.52	□□□□□ -0.24
CLDND1-222	ENST00000510545	KRBOX4	Q5JUW0	171 aa		13.52	□□□□□ -0.24
CLDND1-222	ENST00000510545	ADAM5	Q6NVV9	412 aa		13.52	□□□□□ -0.24
CLDND1-222	ENST00000510545	TGIF2LY	Q8IUE0	185 aa		13.52	□□□□□ -0.24
CLDND1-222	ENST00000510545	BVES	Q8NE79	360 aa		13.52	□□□□□ -0.24
CLDND1-222	ENST00000510545	MRGPRD	Q8TDS7	321 aa		13.52	□□□□□ -0.24
CLDND1-222	ENST00000510545	TMEM56	Q96MV1	263 aa		13.52	□□□□□ -0.24
CLDND1-222	ENST00000510545	DCTN5	Q9BTE1	182 aa		13.52	□□□□□ -0.24
CLDND1-222	ENST00000510545	GCM1	Q9NP62	436 aa		13.52	□□□□□ -0.24
CLDND1-222	ENST00000510545	TMEM56-RWDD3	S4R434	201 aa		13.52	□□□□□ -0.24
CLDND1-222	ENST00000510545	KANTR	A0A1W2PQU2	76 aa		13.52	□□□□□ -0.25
CLDND1-222	ENST00000510545	OR4A8	P0C604	315 aa		13.52	□□□□□ -0.25
CLDND1-222	ENST00000510545	CEACAM6	P40199	344 aa		13.52	□□□□□ -0.25
CLDND1-222	ENST00000510545	LUM	P51884	338 aa	Predicted RBP	13.52	□□□□□ -0.25
CLDND1-222	ENST00000510545	TNFAIP6	P98066	277 aa	Predicted RBP	13.52	□□□□□ -0.25
CLDND1-222	ENST00000510545	CMTM1	Q8IZ96	169 aa		13.52	□□□□□ -0.25
CLDND1-222	ENST00000510545	ST6GALNAC3	Q8NDV1	305 aa		13.52	□□□□□ -0.25
CLDND1-222	ENST00000510545	OR52M1	Q8NGK5	317 aa		13.52	□□□□□ -0.25
CLDND1-222	ENST00000510545	OR13A1	Q8NGR1	328 aa		13.52	□□□□□ -0.25
CLDND1-222	ENST00000510545	ST8SIA2	Q92186	375 aa		13.52	□□□□□ -0.25
CLDND1-222	ENST00000510545	DNAJB11	Q9UBS4	358 aa		13.52	□□□□□ -0.25
CLDND1-222	ENST00000510545	UBE2J1	Q9Y385	318 aa	Predicted RBP	13.52	□□□□□ -0.25
CLDND1-222	ENST00000510545	HBZ	P02008	142 aa		13.51	□□□□□ -0.25
CLDND1-222	ENST00000510545	MBP	P02686	304 aa	Predicted RBP	13.51	□□□□□ -0.25
CLDND1-222	ENST00000510545	COMMD7	Q86VX2	200 aa		13.51	□□□□□ -0.25
CLDND1-222	ENST00000510545	SELENOH	Q8IZQ5	122 aa	Known RBP	13.51	□□□□□ -0.25
CLDND1-222	ENST00000510545	MARVELD3	Q96A59	401 aa		13.51	□□□□□ -0.25
CLDND1-222	ENST00000510545	KCNIP1	Q9NZI2	227 aa		13.51	□□□□□ -0.25
CLDND1-222	ENST00000510545	IL19	Q9UHD0	177 aa		13.51	□□□□□ -0.25
CLDND1-222	ENST00000510545	CACNA1A	O00555	2505 aa		13.51	□□□□□ -0.25
CLDND1-222	ENST00000510545	OOEP	A6NGQ2	149 aa		13.51	□□□□□ -0.25
CLDND1-222	ENST00000510545	CDS2	O95674	445 aa		13.51	□□□□□ -0.25
CLDND1-222	ENST00000510545	SCGB1D2	O95969	90 aa		13.51	□□□□□ -0.25
CLDND1-222	ENST00000510545	UCP1	P25874	307 aa		13.51	□□□□□ -0.25
CLDND1-222	ENST00000510545	CD80	P33681	288 aa		13.51	□□□□□ -0.25
CLDND1-222	ENST00000510545	RAB14	P61106	215 aa		13.51	□□□□□ -0.25
CLDND1-222	ENST00000510545	GNMT	Q14749	295 aa		13.51	□□□□□ -0.25
CLDND1-222	ENST00000510545	FAM90A1	Q86YD7	464 aa		13.51	□□□□□ -0.25
CLDND1-222	ENST00000510545	ZCCHC24	Q8N2G6	241 aa	Known RBP	13.51	□□□□□ -0.25
CLDND1-222	ENST00000510545	OR52L2P	Q8NGH6	319 aa		13.51	□□□□□ -0.25
CLDND1-222	ENST00000510545	SUN5	Q8TC36	379 aa		13.51	□□□□□ -0.25
CLDND1-222	ENST00000510545	SCARB1	Q8WTV0	552 aa		13.51	□□□□□ -0.25
CLDND1-222	ENST00000510545	ZNF471	Q9BX82	626 aa	Predicted RBP	13.51	□□□□□ -0.25
CLDND1-222	ENST00000510545	DCAF16	Q9NXF7	216 aa		13.51	□□□□□ -0.25
CLDND1-222	ENST00000510545	FBXO9	Q9UK97	447 aa	Predicted RBP	13.51	□□□□□ -0.25
CLDND1-222	ENST00000510545	LSM5	Q9Y4Y9	91 aa	Known RBP	13.51	□□□□□ -0.25
CLDND1-222	ENST00000510545	NKX2-6	A6NCS4	301 aa		13.5	□□□□□ -0.25
CLDND1-222	ENST00000510545	SHOX	O15266	292 aa		13.5	□□□□□ -0.25
CLDND1-222	ENST00000510545	OR8U9	P0C7N5	309 aa		13.5	□□□□□ -0.25
CLDND1-222	ENST00000510545	SSTR5	P35346	364 aa		13.5	□□□□□ -0.25
CLDND1-222	ENST00000510545	ID4	P47928	161 aa		13.5	□□□□□ -0.25
CLDND1-222	ENST00000510545	CASP6	P55212	293 aa		13.5	□□□□□ -0.25
CLDND1-222	ENST00000510545	EDDM3A	Q14507	147 aa		13.5	□□□□□ -0.25
CLDND1-222	ENST00000510545	UNQ6494/PRO21346	Q6UXR6	183 aa		13.5	□□□□□ -0.25
CLDND1-222	ENST00000510545	ZNRF1	Q8ND25	227 aa		13.5	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms