RNA–Protein interactions for RNA: ENST00000510533.5

NEK1-206, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-206ENST00000510533 RBM11P57052 281 aaKnown RBP9.25□□□□□ -0.93
NEK1-206ENST00000510533 HIKESHIQ53FT3 197 aa9.25□□□□□ -0.93
NEK1-206ENST00000510533 C16orf82Q7Z2V1 217 aa9.25□□□□□ -0.93
NEK1-206ENST00000510533 SLC25A40Q8TBP6 338 aa9.25□□□□□ -0.93
NEK1-206ENST00000510533 C1RLQ9NZP8 487 aa9.25□□□□□ -0.93
NEK1-206ENST00000510533 NHSQ6T4R5 1651 aa9.25□□□□□ -0.93
NEK1-206ENST00000510533 NINQ8N4C6 2090 aa9.25□□□□□ -0.93
NEK1-206ENST00000510533 PAPPA2Q9BXP8 1791 aa9.25□□□□□ -0.93
NEK1-206ENST00000510533 CCL4P13236 92 aa9.25□□□□□ -0.93
NEK1-206ENST00000510533 CD99P14209 185 aa9.25□□□□□ -0.93
NEK1-206ENST00000510533 ZNF25P17030 456 aaPredicted RBP9.25□□□□□ -0.93
NEK1-206ENST00000510533 TRIP6Q15654 476 aaKnown RBP9.25□□□□□ -0.93
NEK1-206ENST00000510533 VAX1Q5SQQ9 334 aa9.25□□□□□ -0.93
NEK1-206ENST00000510533 DCAF12L2Q5VW00 463 aa9.25□□□□□ -0.93
NEK1-206ENST00000510533 NSUN5P2Q63ZY6 315 aa9.25□□□□□ -0.93
NEK1-206ENST00000510533 ZNF343Q6P1L6 599 aa9.25□□□□□ -0.93
NEK1-206ENST00000510533 C1orf210Q8IVY1 113 aa9.25□□□□□ -0.93
NEK1-206ENST00000510533 NFAM1Q8NET5 270 aaPredicted RBP9.25□□□□□ -0.93
NEK1-206ENST00000510533 GHITMQ9H3K2 345 aa9.25□□□□□ -0.93
NEK1-206ENST00000510533 NUP214P35658 2090 aaPredicted RBP9.25□□□□□ -0.93
NEK1-206ENST00000510533 MAP1BP46821 2468 aaKnown RBP9.24□□□□□ -0.93
NEK1-206ENST00000510533 MFSD2BA6NFX1 497 aa9.24□□□□□ -0.93
NEK1-206ENST00000510533 SPINT1O43278 529 aa9.24□□□□□ -0.93
NEK1-206ENST00000510533 FCGR3AP08637 254 aa9.24□□□□□ -0.93
NEK1-206ENST00000510533 BCL2P10415 239 aa9.24□□□□□ -0.93
NEK1-206ENST00000510533 SUCLG1P53597 346 aaKnown RBP9.24□□□□□ -0.93
NEK1-206ENST00000510533 OVCH2Q7RTZ1 564 aa9.24□□□□□ -0.93
NEK1-206ENST00000510533 VN1R17PQ8TDU5 208 aa9.24□□□□□ -0.93
NEK1-206ENST00000510533 PRSS27Q9BQR3 290 aa9.24□□□□□ -0.93
NEK1-206ENST00000510533 PAM16Q9Y3D7 125 aa9.24□□□□□ -0.93
NEK1-206ENST00000510533 SMCHD1A6NHR9 2005 aa9.24□□□□□ -0.93
NEK1-206ENST00000510533 F12P00748 615 aaPredicted RBP9.24□□□□□ -0.93
NEK1-206ENST00000510533 FSTP19883 344 aa9.24□□□□□ -0.93
NEK1-206ENST00000510533 FAM3BP58499 235 aaPredicted RBP9.24□□□□□ -0.93
NEK1-206ENST00000510533 ASCL5Q7RTU5 278 aa9.24□□□□□ -0.93
NEK1-206ENST00000510533 LDLRAD3Q86YD5 345 aa9.24□□□□□ -0.93
NEK1-206ENST00000510533 WDFY1Q8IWB7 410 aa9.24□□□□□ -0.93
NEK1-206ENST00000510533 OR8I2Q8N0Y5 310 aa9.24□□□□□ -0.93
NEK1-206ENST00000510533 OR1L8Q8NGR8 309 aa9.24□□□□□ -0.93
NEK1-206ENST00000510533 OR5R1Q8NH85 324 aa9.24□□□□□ -0.93
NEK1-206ENST00000510533 ZNF721Q8TF20 911 aa9.24□□□□□ -0.93
NEK1-206ENST00000510533 MRPL37Q9BZE1 423 aaKnown RBP9.24□□□□□ -0.93
NEK1-206ENST00000510533 AURKAIP1Q9NWT8 199 aaPredicted RBP9.24□□□□□ -0.93
NEK1-206ENST00000510533 CLN8Q9UBY8 286 aa9.24□□□□□ -0.93
NEK1-206ENST00000510533 DOCK1Q14185 1865 aa9.24□□□□□ -0.93
NEK1-206ENST00000510533 ZNF98A6NK75 572 aa9.24□□□□□ -0.93
NEK1-206ENST00000510533 FOXS1O43638 330 aa9.24□□□□□ -0.93
NEK1-206ENST00000510533 STAG3L2P0CL84 134 aa9.24□□□□□ -0.93
NEK1-206ENST00000510533 MUC1P15941 1255 aaPredicted RBP9.24□□□□□ -0.93
NEK1-206ENST00000510533 SERF2P84101 59 aa9.24□□□□□ -0.93
NEK1-206ENST00000510533 ZP4Q12836 540 aa9.24□□□□□ -0.93
NEK1-206ENST00000510533 BPIFA4PQ86YQ2 179 aa9.24□□□□□ -0.93
NEK1-206ENST00000510533 MEGF10Q96KG7 1140 aa9.24□□□□□ -0.93
NEK1-206ENST00000510533 FSCN3Q9NQT6 498 aa9.24□□□□□ -0.93
NEK1-206ENST00000510533 ARID1AO14497 2285 aa9.24□□□□□ -0.93
NEK1-206ENST00000510533 AESQ08117 197 aa9.24□□□□□ -0.93
NEK1-206ENST00000510533 INO80CQ6PI98 192 aaPredicted RBP9.24□□□□□ -0.93
NEK1-206ENST00000510533 RFLNBQ8N5W9 214 aa9.24□□□□□ -0.93
NEK1-206ENST00000510533 ADAMTS17Q8TE56 1095 aa9.24□□□□□ -0.93
NEK1-206ENST00000510533 ZNF552Q9H707 407 aaPredicted RBP9.24□□□□□ -0.93
NEK1-206ENST00000510533 INSIG2Q9Y5U4 225 aa9.24□□□□□ -0.93
NEK1-206ENST00000510533 F2RL2O00254 374 aa9.23□□□□□ -0.93
NEK1-206ENST00000510533 KCNAB3O43448 404 aa9.23□□□□□ -0.93
NEK1-206ENST00000510533 RHBDL1O75783 438 aa9.23□□□□□ -0.93
NEK1-206ENST00000510533 IGKV1D-16P01601 117 aa9.23□□□□□ -0.93
NEK1-206ENST00000510533 HLA-DQB1P01920 261 aa9.23□□□□□ -0.93
NEK1-206ENST00000510533 GAPDHP04406 335 aaKnown RBP9.23□□□□□ -0.93
NEK1-206ENST00000510533 KCNK7Q9Y2U2 307 aa9.23□□□□□ -0.93
NEK1-206ENST00000510533 C21orf140B9A014 251 aa9.23□□□□□ -0.93
NEK1-206ENST00000510533 J3QR06 171 aa9.23□□□□□ -0.93
NEK1-206ENST00000510533 NMBP08949 121 aa9.23□□□□□ -0.93
NEK1-206ENST00000510533 ASAH2BP0C7U1 165 aa9.23□□□□□ -0.93
NEK1-206ENST00000510533 OR8A1Q8NGG7 326 aa9.23□□□□□ -0.93
NEK1-206ENST00000510533 ZNF385AQ96PM9 386 aaKnown RBP9.23□□□□□ -0.93
NEK1-206ENST00000510533 SMOC1Q9H4F8 434 aa9.23□□□□□ -0.93
NEK1-206ENST00000510533 IFITM10A6NMD0 228 aa9.23□□□□□ -0.93
NEK1-206ENST00000510533 C1QCP02747 245 aa9.23□□□□□ -0.93
NEK1-206ENST00000510533 WNT5AP41221 380 aa9.23□□□□□ -0.93
NEK1-206ENST00000510533 FAM209AQ5JX71 171 aa9.23□□□□□ -0.93
NEK1-206ENST00000510533 CYB561D1Q8N8Q1 229 aa9.23□□□□□ -0.93
NEK1-206ENST00000510533 SNRNP40Q96DI7 357 aaKnown RBP9.23□□□□□ -0.93
NEK1-206ENST00000510533 ATG101Q9BSB4 218 aa9.23□□□□□ -0.93
NEK1-206ENST00000510533 MMP9P14780 707 aa9.23□□□□□ -0.93
NEK1-206ENST00000510533 KIR2DL1P43626 348 aaPredicted RBP9.23□□□□□ -0.93
NEK1-206ENST00000510533 SRSF9Q13242 221 aaKnown RBP eCLIP9.23□□□□□ -0.93
NEK1-206ENST00000510533 FBXW9Q5XUX1 488 aa9.23□□□□□ -0.93
NEK1-206ENST00000510533 SGMS2Q8NHU3 365 aa9.23□□□□□ -0.93
NEK1-206ENST00000510533 FAM222BQ8WU58 562 aa9.23□□□□□ -0.93
NEK1-206ENST00000510533 TBX15Q96SF7 602 aa9.23□□□□□ -0.93
NEK1-206ENST00000510533 SLC25A33Q9BSK2 321 aa9.23□□□□□ -0.93
NEK1-206ENST00000510533 OR5AC2Q9NZP5 309 aa9.23□□□□□ -0.93
NEK1-206ENST00000510533 IL19Q9UHD0 177 aa9.23□□□□□ -0.93
NEK1-206ENST00000510533 OR51B2Q9Y5P1 312 aa9.23□□□□□ -0.93
NEK1-206ENST00000510533 IGHV5-10-1A0A0J9YXX1 117 aa9.23□□□□□ -0.93
NEK1-206ENST00000510533 DIRC3C9JPN6 131 aa9.23□□□□□ -0.93
NEK1-206ENST00000510533 DXOO77932 396 aaKnown RBP9.23□□□□□ -0.93
NEK1-206ENST00000510533 CD1BP29016 333 aa9.23□□□□□ -0.93
NEK1-206ENST00000510533 PPP1CCP36873 323 aaKnown RBP9.23□□□□□ -0.93
NEK1-206ENST00000510533 LIMS1P48059 325 aa9.23□□□□□ -0.93
NEK1-206ENST00000510533 GUCA2BQ16661 112 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms