RNA–Protein interactions for RNA: ENST00000509552.5

CCHCR1-228, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 1 (best)

Gene CCHCR1, Length 2,304 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-228ENST00000509552 RBFOX3A6NFN3 312 aa15.24■□□□□ 0.03
CCHCR1-228ENST00000509552 CDRT15L2A8MXV6 281 aa15.24■□□□□ 0.03
CCHCR1-228ENST00000509552 NPIPB11E5RHQ5 1161 aa15.24■□□□□ 0.03
CCHCR1-228ENST00000509552 PSG2P11465 335 aa15.24■□□□□ 0.03
CCHCR1-228ENST00000509552 ZNF154Q13106 437 aa15.24■□□□□ 0.03
CCHCR1-228ENST00000509552 SOHLH1Q5JUK2 328 aa15.24■□□□□ 0.03
CCHCR1-228ENST00000509552 AKR1C8PQ5T2L2 129 aa15.24■□□□□ 0.03
CCHCR1-228ENST00000509552 Q6P435 159 aa15.24■□□□□ 0.03
CCHCR1-228ENST00000509552 DHRS13Q6UX07 377 aa15.24■□□□□ 0.03
CCHCR1-228ENST00000509552 ODF3L1Q8IXM7 274 aa15.24■□□□□ 0.03
CCHCR1-228ENST00000509552 GPR146Q96CH1 333 aa15.24■□□□□ 0.03
CCHCR1-228ENST00000509552 ARHGAP21Q5T5U3 1957 aa15.24■□□□□ 0.03
CCHCR1-228ENST00000509552 DFFBO76075 338 aa15.23■□□□□ 0.03
CCHCR1-228ENST00000509552 IFNA4P05014 189 aa15.23■□□□□ 0.03
CCHCR1-228ENST00000509552 ESRP2Q9H6T0 727 aaKnown RBP15.23■□□□□ 0.03
CCHCR1-228ENST00000509552 UNKLQ9H9P5 680 aaKnown RBP15.23■□□□□ 0.03
CCHCR1-228ENST00000509552 OR1A1Q9P1Q5 309 aa15.23■□□□□ 0.03
CCHCR1-228ENST00000509552 RBM7Q9Y580 266 aaKnown RBP15.23■□□□□ 0.03
CCHCR1-228ENST00000509552 CDX4O14627 284 aaPredicted RBP15.23■□□□□ 0.03
CCHCR1-228ENST00000509552 WNT2P09544 360 aa15.23■□□□□ 0.03
CCHCR1-228ENST00000509552 ARG2P78540 354 aa15.23■□□□□ 0.03
CCHCR1-228ENST00000509552 PLA2G2CQ5R387 149 aa15.23■□□□□ 0.03
CCHCR1-228ENST00000509552 RAB40CQ96S21 281 aa15.23■□□□□ 0.03
CCHCR1-228ENST00000509552 RARRES2Q99969 163 aa15.23■□□□□ 0.03
CCHCR1-228ENST00000509552 ABHD14AQ9BUJ0 271 aa15.23■□□□□ 0.03
CCHCR1-228ENST00000509552 TRAPPC2LQ9UL33 140 aa15.23■□□□□ 0.03
CCHCR1-228ENST00000509552 MED13Q9UHV7 2174 aa15.22■□□□□ 0.03
CCHCR1-228ENST00000509552 A0A0G2JRQ6 117 aa15.22■□□□□ 0.03
CCHCR1-228ENST00000509552 ARGFXA6NJG6 315 aa15.22■□□□□ 0.03
CCHCR1-228ENST00000509552 ZNF98A6NK75 572 aa15.22■□□□□ 0.03
CCHCR1-228ENST00000509552 PCP4L1A6NKN8 68 aa15.22■□□□□ 0.03
CCHCR1-228ENST00000509552 C3orf80F5H4A9 247 aa15.22■□□□□ 0.03
CCHCR1-228ENST00000509552 SIRPB1O00241 398 aa15.22■□□□□ 0.03
CCHCR1-228ENST00000509552 CNOT4O95628 575 aaKnown RBP15.22■□□□□ 0.03
CCHCR1-228ENST00000509552 CEACAM1P13688 526 aa15.22■□□□□ 0.03
CCHCR1-228ENST00000509552 PAX9P55771 341 aa15.22■□□□□ 0.03
CCHCR1-228ENST00000509552 RAB2AP61019 212 aa15.22■□□□□ 0.03
CCHCR1-228ENST00000509552 HABP2Q14520 560 aaPredicted RBP15.22■□□□□ 0.03
CCHCR1-228ENST00000509552 ZNF766Q5HY98 468 aa15.22■□□□□ 0.03
CCHCR1-228ENST00000509552 KRBOX4Q5JUW0 171 aa15.22■□□□□ 0.03
CCHCR1-228ENST00000509552 PRR18Q8N4B5 295 aa15.22■□□□□ 0.03
CCHCR1-228ENST00000509552 CDH20Q9HBT6 801 aa15.22■□□□□ 0.03
CCHCR1-228ENST00000509552 KIAA1456Q9P272 454 aa15.22■□□□□ 0.03
CCHCR1-228ENST00000509552 SPRR3Q9UBC9 169 aa15.22■□□□□ 0.03
CCHCR1-228ENST00000509552 OR2H2O95918 312 aa15.22■□□□□ 0.03
CCHCR1-228ENST00000509552 IFNA5P01569 189 aa15.22■□□□□ 0.03
CCHCR1-228ENST00000509552 UBE2NP61088 152 aaKnown RBP15.22■□□□□ 0.03
CCHCR1-228ENST00000509552 CCL20P78556 96 aa15.22■□□□□ 0.03
CCHCR1-228ENST00000509552 TLE4Q04727 773 aa15.22■□□□□ 0.03
CCHCR1-228ENST00000509552 TGIF1Q15583 401 aa15.22■□□□□ 0.03
CCHCR1-228ENST00000509552 HES3Q5TGS1 186 aa15.22■□□□□ 0.03
CCHCR1-228ENST00000509552 SLC25A24Q6NUK1 477 aa15.22■□□□□ 0.03
CCHCR1-228ENST00000509552 SPSB3Q6PJ21 355 aa15.22■□□□□ 0.03
CCHCR1-228ENST00000509552 P4HA3Q7Z4N8 544 aa15.22■□□□□ 0.03
CCHCR1-228ENST00000509552 VASH2Q86V25 355 aa15.22■□□□□ 0.03
CCHCR1-228ENST00000509552 ZNF561Q8N587 486 aa15.22■□□□□ 0.03
CCHCR1-228ENST00000509552 SCCPDHQ8NBX0 429 aa15.22■□□□□ 0.03
CCHCR1-228ENST00000509552 SFT2D1Q8WV19 159 aa15.22■□□□□ 0.03
CCHCR1-228ENST00000509552 LSM10Q969L4 123 aaKnown RBP15.22■□□□□ 0.03
CCHCR1-228ENST00000509552 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP15.21■□□□□ 0.03
CCHCR1-228ENST00000509552 DAOP14920 347 aa15.21■□□□□ 0.03
CCHCR1-228ENST00000509552 SULT1A1P50225 295 aa15.21■□□□□ 0.03
CCHCR1-228ENST00000509552 PPP1CBP62140 327 aa15.21■□□□□ 0.03
CCHCR1-228ENST00000509552 RUNX1Q01196 453 aa15.21■□□□□ 0.03
CCHCR1-228ENST00000509552 TGFBR3Q03167 851 aa15.21■□□□□ 0.03
CCHCR1-228ENST00000509552 IGFBP7Q16270 282 aa15.21■□□□□ 0.03
CCHCR1-228ENST00000509552 DPPA3Q6W0C5 159 aa15.21■□□□□ 0.03
CCHCR1-228ENST00000509552 ZNF497Q6ZNH5 498 aa15.21■□□□□ 0.03
CCHCR1-228ENST00000509552 TMEM178AQ8NBL3 297 aa15.21■□□□□ 0.03
CCHCR1-228ENST00000509552 ISOC2Q96AB3 205 aa15.21■□□□□ 0.03
CCHCR1-228ENST00000509552 GMPPAQ96IJ6 420 aaPredicted RBP15.21■□□□□ 0.03
CCHCR1-228ENST00000509552 WDFY4Q6ZS81 3184 aa15.21■□□□□ 0.03
CCHCR1-228ENST00000509552 MUC3AQ02505 3323 aa15.21■□□□□ 0.03
CCHCR1-228ENST00000509552 TXNL1O43396 289 aa15.21■□□□□ 0.02
CCHCR1-228ENST00000509552 SMPD2O60906 423 aa15.21■□□□□ 0.02
CCHCR1-228ENST00000509552 ZNF14P17017 642 aaPredicted RBP15.21■□□□□ 0.02
CCHCR1-228ENST00000509552 TAS2R30P59541 319 aa15.21■□□□□ 0.02
CCHCR1-228ENST00000509552 SHEQ5VZ18 495 aa15.21■□□□□ 0.02
CCHCR1-228ENST00000509552 OR2J1Q9GZK6 312 aa15.21■□□□□ 0.02
CCHCR1-228ENST00000509552 PPP1R3CQ9UQK1 317 aa15.21■□□□□ 0.02
CCHCR1-228ENST00000509552 KNTC1P50748 2209 aa15.21■□□□□ 0.02
CCHCR1-228ENST00000509552 TRAV39A0A0B4J263 110 aa15.2■□□□□ 0.02
CCHCR1-228ENST00000509552 A0A1W2PPH5 198 aa15.2■□□□□ 0.02
CCHCR1-228ENST00000509552 M0R296 226 aa15.2■□□□□ 0.02
CCHCR1-228ENST00000509552 SH2D1BO14796 132 aa15.2■□□□□ 0.02
CCHCR1-228ENST00000509552 NXPH2O95156 264 aa15.2■□□□□ 0.02
CCHCR1-228ENST00000509552 HBE1P02100 147 aa15.2■□□□□ 0.02
CCHCR1-228ENST00000509552 S100A6P06703 90 aa15.2■□□□□ 0.02
CCHCR1-228ENST00000509552 TESK1Q15569 626 aa15.2■□□□□ 0.02
CCHCR1-228ENST00000509552 WDR86Q86TI4 376 aa15.2■□□□□ 0.02
CCHCR1-228ENST00000509552 C12orf57Q99622 126 aa15.2■□□□□ 0.02
CCHCR1-228ENST00000509552 LIN7CQ9NUP9 197 aaKnown RBP15.2■□□□□ 0.02
CCHCR1-228ENST00000509552 COA4Q9NYJ1 87 aa15.2■□□□□ 0.02
CCHCR1-228ENST00000509552 KCNS2Q9ULS6 477 aa15.2■□□□□ 0.02
CCHCR1-228ENST00000509552 PUS1Q9Y606 427 aaKnown RBP eCLIP15.2■□□□□ 0.02
CCHCR1-228ENST00000509552 WSB1Q9Y6I7 421 aa15.2■□□□□ 0.02
CCHCR1-228ENST00000509552 R4GN57 208 aa15.2■□□□□ 0.02
CCHCR1-228ENST00000509552 DOCK7Q96N67 2140 aa15.2■□□□□ 0.02
CCHCR1-228ENST00000509552 H3BP45 60 aa15.2■□□□□ 0.02
CCHCR1-228ENST00000509552 ERVK11-1P61568 191 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms