RNA–Protein interactions for RNA: ENST00000508583.5

NUP54-207, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-207ENST00000508583 ZNF581Q9P0T4 197 aa7.45□□□□□ -1.22
NUP54-207ENST00000508583 GNG12Q9UBI6 72 aa7.45□□□□□ -1.22
NUP54-207ENST00000508583 SPATA2Q9UM82 520 aa7.45□□□□□ -1.22
NUP54-207ENST00000508583 A0A0A6YYD4 124 aa7.44□□□□□ -1.22
NUP54-207ENST00000508583 MEX3AA1L020 520 aaKnown RBP7.44□□□□□ -1.22
NUP54-207ENST00000508583 DNAJC9-AS1A6NH13 148 aa7.44□□□□□ -1.22
NUP54-207ENST00000508583 ODF3BA8MYP8 253 aa7.44□□□□□ -1.22
NUP54-207ENST00000508583 LEUTXA8MZ59 168 aa7.44□□□□□ -1.22
NUP54-207ENST00000508583 OOSP1A8MZH6 123 aa7.44□□□□□ -1.22
NUP54-207ENST00000508583 C12orf77C9JDV5 145 aa7.44□□□□□ -1.22
NUP54-207ENST00000508583 F2RL2O00254 374 aa7.44□□□□□ -1.22
NUP54-207ENST00000508583 NAPSAO96009 420 aa7.44□□□□□ -1.22
NUP54-207ENST00000508583 GSTP1P09211 210 aaKnown RBP7.44□□□□□ -1.22
NUP54-207ENST00000508583 CGB3P0DN86 165 aa7.44□□□□□ -1.22
NUP54-207ENST00000508583 CGB7P0DN87 165 aa7.44□□□□□ -1.22
NUP54-207ENST00000508583 SNRPBP14678 240 aaKnown RBP7.44□□□□□ -1.22
NUP54-207ENST00000508583 OMGP23515 440 aa7.44□□□□□ -1.22
NUP54-207ENST00000508583 SOX6P35712 828 aa7.44□□□□□ -1.22
NUP54-207ENST00000508583 RPS19P39019 145 aaKnown RBP7.44□□□□□ -1.22
NUP54-207ENST00000508583 KIR2DS4P43632 304 aa7.44□□□□□ -1.22
NUP54-207ENST00000508583 TMBIM6P55061 237 aa7.44□□□□□ -1.22
NUP54-207ENST00000508583 VBP1P61758 197 aa7.44□□□□□ -1.22
NUP54-207ENST00000508583 HTD2P86397 168 aa7.44□□□□□ -1.22
NUP54-207ENST00000508583 KIR2DS1Q14954 304 aa7.44□□□□□ -1.22
NUP54-207ENST00000508583 UBE2NLQ5JXB2 153 aa7.44□□□□□ -1.22
NUP54-207ENST00000508583 HCP5Q6MZN7 132 aa7.44□□□□□ -1.22
NUP54-207ENST00000508583 MZT2AQ6P582 158 aa7.44□□□□□ -1.22
NUP54-207ENST00000508583 LIAT1Q6ZQX7 453 aa7.44□□□□□ -1.22
NUP54-207ENST00000508583 BCL6BQ8N143 479 aaPredicted RBP7.44□□□□□ -1.22
NUP54-207ENST00000508583 C8orf31Q8N9H6 132 aa7.44□□□□□ -1.22
NUP54-207ENST00000508583 DTX3Q8N9I9 347 aa7.44□□□□□ -1.22
NUP54-207ENST00000508583 OR10X1Q8NGY0 326 aa7.44□□□□□ -1.22
NUP54-207ENST00000508583 OR4K15Q8NH41 348 aa7.44□□□□□ -1.22
NUP54-207ENST00000508583 MRPL30Q8TCC3 161 aaKnown RBP7.44□□□□□ -1.22
NUP54-207ENST00000508583 FAM216AQ8WUB2 273 aa7.44□□□□□ -1.22
NUP54-207ENST00000508583 S100A16Q96FQ6 103 aaKnown RBP7.44□□□□□ -1.22
NUP54-207ENST00000508583 PECRQ9BY49 303 aa7.44□□□□□ -1.22
NUP54-207ENST00000508583 TAF9BQ9HBM6 251 aa7.44□□□□□ -1.22
NUP54-207ENST00000508583 RAB18Q9NP72 206 aa7.44□□□□□ -1.22
NUP54-207ENST00000508583 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.44□□□□□ -1.22
NUP54-207ENST00000508583 ABCB10Q9NRK6 738 aa7.44□□□□□ -1.22
NUP54-207ENST00000508583 ZNRD1Q9P1U0 126 aa7.44□□□□□ -1.22
NUP54-207ENST00000508583 DPM3Q9P2X0 92 aa7.44□□□□□ -1.22
NUP54-207ENST00000508583 AK3Q9UIJ7 227 aa7.44□□□□□ -1.22
NUP54-207ENST00000508583 JPT1Q9UK76 154 aa7.44□□□□□ -1.22
NUP54-207ENST00000508583 A0A0B4J203 849 aa7.43□□□□□ -1.22
NUP54-207ENST00000508583 SMIM31A0A1B0GVY4 71 aa7.43□□□□□ -1.22
NUP54-207ENST00000508583 A0A1W2PRD5 423 aa7.43□□□□□ -1.22
NUP54-207ENST00000508583 A0A1W2PRF3 423 aa7.43□□□□□ -1.22
NUP54-207ENST00000508583 A0A1W2PRM7 423 aa7.43□□□□□ -1.22
NUP54-207ENST00000508583 FOXI3A8MTJ6 420 aaPredicted RBP7.43□□□□□ -1.22
NUP54-207ENST00000508583 C15orf65H3BRN8 121 aa7.43□□□□□ -1.22
NUP54-207ENST00000508583 J3QR06 171 aa7.43□□□□□ -1.22
NUP54-207ENST00000508583 RAB27BO00194 218 aa7.43□□□□□ -1.22
NUP54-207ENST00000508583 MFNGO00587 321 aa7.43□□□□□ -1.22
NUP54-207ENST00000508583 DIRAS3O95661 229 aa7.43□□□□□ -1.22
NUP54-207ENST00000508583 HBZP02008 142 aa7.43□□□□□ -1.22
NUP54-207ENST00000508583 CRYBA1P05813 215 aa7.43□□□□□ -1.22
NUP54-207ENST00000508583 RNASE1P07998 156 aaKnown RBP7.43□□□□□ -1.22
NUP54-207ENST00000508583 MELTFP08582 738 aa7.43□□□□□ -1.22
NUP54-207ENST00000508583 CLEC2LP0C7M8 214 aa7.43□□□□□ -1.22
NUP54-207ENST00000508583 RCC1P18754 421 aaPredicted RBP7.43□□□□□ -1.22
NUP54-207ENST00000508583 BRS3P32247 399 aa7.43□□□□□ -1.22
NUP54-207ENST00000508583 MNDAP41218 407 aa7.43□□□□□ -1.22
NUP54-207ENST00000508583 DLX1P56177 255 aa7.43□□□□□ -1.22
NUP54-207ENST00000508583 NCS1P62166 190 aa7.43□□□□□ -1.22
NUP54-207ENST00000508583 UBA52P62987 128 aaKnown RBP7.43□□□□□ -1.22
NUP54-207ENST00000508583 MADCAM1Q13477 382 aa7.43□□□□□ -1.22
NUP54-207ENST00000508583 ARFRP1Q13795 201 aa7.43□□□□□ -1.22
NUP54-207ENST00000508583 CTF1Q16619 201 aa7.43□□□□□ -1.22
NUP54-207ENST00000508583 SRSF7Q16629 238 aaKnown RBP eCLIP7.43□□□□□ -1.22
NUP54-207ENST00000508583 LTC4SQ16873 150 aa7.43□□□□□ -1.22
NUP54-207ENST00000508583 LRRC75BQ2VPJ9 315 aa7.43□□□□□ -1.22
NUP54-207ENST00000508583 HLA-DRB5Q30154 266 aa7.43□□□□□ -1.22
NUP54-207ENST00000508583 CLVS1Q8IUQ0 354 aaPredicted RBP7.43□□□□□ -1.22
NUP54-207ENST00000508583 PRR18Q8N4B5 295 aa7.43□□□□□ -1.22
NUP54-207ENST00000508583 RFESDQ8TAC1 157 aa7.43□□□□□ -1.22
NUP54-207ENST00000508583 SETD6Q8TBK2 473 aa7.43□□□□□ -1.22
NUP54-207ENST00000508583 DYRK2Q92630 601 aa7.43□□□□□ -1.22
NUP54-207ENST00000508583 RPEQ96AT9 228 aa7.43□□□□□ -1.22
NUP54-207ENST00000508583 CMTM3Q96MX0 182 aa7.43□□□□□ -1.22
NUP54-207ENST00000508583 ZNF48Q96MX3 618 aaPredicted RBP7.43□□□□□ -1.22
NUP54-207ENST00000508583 MEGF9Q9H1U4 602 aa7.43□□□□□ -1.22
NUP54-207ENST00000508583 MMP28Q9H239 520 aa7.43□□□□□ -1.22
NUP54-207ENST00000508583 DCSTAMPQ9H295 470 aa7.43□□□□□ -1.22
NUP54-207ENST00000508583 OR2S2Q9NQN1 319 aa7.43□□□□□ -1.22
NUP54-207ENST00000508583 GFOD1Q9NXC2 390 aa7.43□□□□□ -1.22
NUP54-207ENST00000508583 PITPNC1Q9UKF7 332 aa7.43□□□□□ -1.22
NUP54-207ENST00000508583 A0A075B6Q4 140 aa7.42□□□□□ -1.22
NUP54-207ENST00000508583 RNF212BA8MTL3 300 aa7.42□□□□□ -1.22
NUP54-207ENST00000508583 VGLL3A8MV65 326 aa7.42□□□□□ -1.22
NUP54-207ENST00000508583 BUB1B-PAK6H3BSN5 160 aa7.42□□□□□ -1.22
NUP54-207ENST00000508583 HSPA12AO43301 675 aa7.42□□□□□ -1.22
NUP54-207ENST00000508583 HOXA3O43365 443 aaPredicted RBP7.42□□□□□ -1.22
NUP54-207ENST00000508583 TXNL1O43396 289 aa7.42□□□□□ -1.22
NUP54-207ENST00000508583 MMP23AO75900 390 aa7.42□□□□□ -1.22
NUP54-207ENST00000508583 IGLV1-47P01700 117 aa7.42□□□□□ -1.22
NUP54-207ENST00000508583 GNB3P16520 340 aa7.42□□□□□ -1.22
NUP54-207ENST00000508583 ZNF182P17025 639 aaPredicted RBP7.42□□□□□ -1.22
NUP54-207ENST00000508583 DTYMKP23919 212 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms