RNA–Protein interactions for RNA: ENST00000507004.1

HMGCS1-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 950 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-203ENST00000507004 CAPGP40121 348 aa11.44□□□□□ -0.58
HMGCS1-203ENST00000507004 ZNF137PP52743 207 aa11.44□□□□□ -0.58
HMGCS1-203ENST00000507004 GP2P55259 537 aaKnown RBP11.44□□□□□ -0.58
HMGCS1-203ENST00000507004 RPS11P62280 158 aaKnown RBP eCLIP11.44□□□□□ -0.58
HMGCS1-203ENST00000507004 LRRC36Q1X8D7 754 aa11.44□□□□□ -0.58
HMGCS1-203ENST00000507004 AWAT2Q6E213 333 aa11.44□□□□□ -0.58
HMGCS1-203ENST00000507004 GLIPR1L1Q6UWM5 242 aa11.44□□□□□ -0.58
HMGCS1-203ENST00000507004 Q6ZPA2 131 aa11.44□□□□□ -0.58
HMGCS1-203ENST00000507004 MOB3BQ86TA1 216 aa11.44□□□□□ -0.58
HMGCS1-203ENST00000507004 GAPTQ8N292 157 aa11.44□□□□□ -0.58
HMGCS1-203ENST00000507004 MS4A15Q8N5U1 240 aa11.44□□□□□ -0.58
HMGCS1-203ENST00000507004 LEAP2Q969E1 77 aa11.44□□□□□ -0.58
HMGCS1-203ENST00000507004 MUL1Q969V5 352 aa11.44□□□□□ -0.58
HMGCS1-203ENST00000507004 CST11Q9H112 138 aa11.44□□□□□ -0.58
HMGCS1-203ENST00000507004 ETAA1Q9NY74 926 aa11.44□□□□□ -0.58
HMGCS1-203ENST00000507004 KCNIP1Q9NZI2 227 aa11.44□□□□□ -0.58
HMGCS1-203ENST00000507004 GNG12Q9UBI6 72 aa11.44□□□□□ -0.58
HMGCS1-203ENST00000507004 PRKDCP78527 4128 aaKnown RBP11.43□□□□□ -0.58
HMGCS1-203ENST00000507004 IGHV3-7P01780 117 aa11.43□□□□□ -0.58
HMGCS1-203ENST00000507004 FUT3P21217 361 aa11.43□□□□□ -0.58
HMGCS1-203ENST00000507004 RANBP1P43487 201 aa11.43□□□□□ -0.58
HMGCS1-203ENST00000507004 RPL23AP62750 156 aaKnown RBP11.43□□□□□ -0.58
HMGCS1-203ENST00000507004 FOXB2Q5VYV0 432 aa11.43□□□□□ -0.58
HMGCS1-203ENST00000507004 RNLSQ5VYX0 342 aa11.43□□□□□ -0.58
HMGCS1-203ENST00000507004 RAB12Q6IQ22 244 aa11.43□□□□□ -0.58
HMGCS1-203ENST00000507004 OR13C5Q8NGS8 318 aa11.43□□□□□ -0.58
HMGCS1-203ENST00000507004 EAF1Q96JC9 268 aaPredicted RBP11.43□□□□□ -0.58
HMGCS1-203ENST00000507004 DERL3Q96Q80 235 aa11.43□□□□□ -0.58
HMGCS1-203ENST00000507004 OR14A2Q96R54 314 aa11.43□□□□□ -0.58
HMGCS1-203ENST00000507004 CHCHD6Q9BRQ6 235 aa11.43□□□□□ -0.58
HMGCS1-203ENST00000507004 AURKAIP1Q9NWT8 199 aaPredicted RBP11.43□□□□□ -0.58
HMGCS1-203ENST00000507004 PSORS1C1Q9UIG5 152 aa11.43□□□□□ -0.58
HMGCS1-203ENST00000507004 TRAV8-7A0A075B6U6 113 aa11.42□□□□□ -0.58
HMGCS1-203ENST00000507004 SC5DO75845 299 aa11.42□□□□□ -0.58
HMGCS1-203ENST00000507004 MOSP00540 346 aa11.42□□□□□ -0.58
HMGCS1-203ENST00000507004 IGLL1P15814 213 aa11.42□□□□□ -0.58
HMGCS1-203ENST00000507004 MGMTP16455 207 aa11.42□□□□□ -0.58
HMGCS1-203ENST00000507004 CELP19835 753 aa11.42□□□□□ -0.58
HMGCS1-203ENST00000507004 MYCNOSP40205 109 aa11.42□□□□□ -0.58
HMGCS1-203ENST00000507004 HNF4GQ14541 408 aa11.42□□□□□ -0.58
HMGCS1-203ENST00000507004 RCN1Q15293 331 aa11.42□□□□□ -0.58
HMGCS1-203ENST00000507004 UTF1Q5T230 341 aa11.42□□□□□ -0.58
HMGCS1-203ENST00000507004 SYT6Q5T7P8 510 aaPredicted RBP11.42□□□□□ -0.58
HMGCS1-203ENST00000507004 TEX38Q6PEX7 206 aa11.42□□□□□ -0.58
HMGCS1-203ENST00000507004 SLC25A48Q6ZT89 311 aaKnown RBP11.42□□□□□ -0.58
HMGCS1-203ENST00000507004 FBLIM1Q8WUP2 373 aa11.42□□□□□ -0.58
HMGCS1-203ENST00000507004 CCDC107Q8WV48 283 aa11.42□□□□□ -0.58
HMGCS1-203ENST00000507004 RTN4IP1Q8WWV3 396 aaPredicted RBP11.42□□□□□ -0.58
HMGCS1-203ENST00000507004 ST6GALNAC6Q969X2 333 aa11.42□□□□□ -0.58
HMGCS1-203ENST00000507004 ABCG5Q9H222 651 aa11.42□□□□□ -0.58
HMGCS1-203ENST00000507004 ZNF580Q9UK33 172 aa11.42□□□□□ -0.58
HMGCS1-203ENST00000507004 PEX16Q9Y5Y5 336 aa11.42□□□□□ -0.58
HMGCS1-203ENST00000507004 TRAV39A0A0B4J263 110 aa11.41□□□□□ -0.58
HMGCS1-203ENST00000507004 A0A1W2PP11 408 aa11.41□□□□□ -0.58
HMGCS1-203ENST00000507004 SH2D7A6NKC9 451 aaPredicted RBP11.41□□□□□ -0.58
HMGCS1-203ENST00000507004 NCBP2LA6PVI3 153 aaKnown RBP11.41□□□□□ -0.58
HMGCS1-203ENST00000507004 C12orf77C9JDV5 145 aa11.41□□□□□ -0.58
HMGCS1-203ENST00000507004 CASQ2O14958 399 aaPredicted RBP11.41□□□□□ -0.58
HMGCS1-203ENST00000507004 RGS11O94810 467 aa11.41□□□□□ -0.58
HMGCS1-203ENST00000507004 MAS1P04201 325 aa11.41□□□□□ -0.58
HMGCS1-203ENST00000507004 OR5H8P0DN80 308 aa11.41□□□□□ -0.58
HMGCS1-203ENST00000507004 DIAPH2-AS1Q14236 149 aa11.41□□□□□ -0.58
HMGCS1-203ENST00000507004 PNLIPRP3Q17RR3 467 aa11.41□□□□□ -0.58
HMGCS1-203ENST00000507004 LY6G6FQ5SQ64 297 aa11.41□□□□□ -0.58
HMGCS1-203ENST00000507004 OGFRL1Q5TC84 451 aaPredicted RBP11.41□□□□□ -0.58
HMGCS1-203ENST00000507004 GLT8D1Q68CQ7 371 aa11.41□□□□□ -0.58
HMGCS1-203ENST00000507004 AHSA2Q719I0 299 aa11.41□□□□□ -0.58
HMGCS1-203ENST00000507004 STPG2Q8N412 459 aa11.41□□□□□ -0.58
HMGCS1-203ENST00000507004 Q8N6K4 173 aa11.41□□□□□ -0.58
HMGCS1-203ENST00000507004 NANOGP1Q8N7R0 232 aa11.41□□□□□ -0.58
HMGCS1-203ENST00000507004 ZFP41Q8N8Y5 198 aa11.41□□□□□ -0.58
HMGCS1-203ENST00000507004 PHYHIPQ92561 330 aa11.41□□□□□ -0.58
HMGCS1-203ENST00000507004 RASL11BQ9BPW5 248 aa11.41□□□□□ -0.58
HMGCS1-203ENST00000507004 SELENOIQ9C0D9 397 aa11.41□□□□□ -0.58
HMGCS1-203ENST00000507004 JPT1Q9UK76 154 aa11.41□□□□□ -0.58
HMGCS1-203ENST00000507004 A0A1W2PPE3 182 aa11.4□□□□□ -0.58
HMGCS1-203ENST00000507004 ERICH4A6NGS2 130 aa11.4□□□□□ -0.58
HMGCS1-203ENST00000507004 NUDT19A8MXV4 375 aa11.4□□□□□ -0.58
HMGCS1-203ENST00000507004 LANCL1O43813 399 aa11.4□□□□□ -0.58
HMGCS1-203ENST00000507004 PDCD6O75340 191 aa11.4□□□□□ -0.58
HMGCS1-203ENST00000507004 CRTAPO75718 401 aaPredicted RBP11.4□□□□□ -0.58
HMGCS1-203ENST00000507004 ELANEP08246 267 aa11.4□□□□□ -0.58
HMGCS1-203ENST00000507004 THBS3P49746 956 aa11.4□□□□□ -0.58
HMGCS1-203ENST00000507004 HTD2P86397 168 aa11.4□□□□□ -0.58
HMGCS1-203ENST00000507004 GPR50Q13585 617 aa11.4□□□□□ -0.58
HMGCS1-203ENST00000507004 OR2W3Q7Z3T1 314 aa11.4□□□□□ -0.58
HMGCS1-203ENST00000507004 ZNF329Q86UD4 541 aa11.4□□□□□ -0.58
HMGCS1-203ENST00000507004 LYPD6Q86Y78 171 aa11.4□□□□□ -0.58
HMGCS1-203ENST00000507004 LINC00482Q8N8I6 264 aa11.4□□□□□ -0.58
HMGCS1-203ENST00000507004 TMEM104Q8NE00 496 aa11.4□□□□□ -0.58
HMGCS1-203ENST00000507004 BPIFB6Q8NFQ5 453 aa11.4□□□□□ -0.58
HMGCS1-203ENST00000507004 ORAI1Q96D31 301 aa11.4□□□□□ -0.58
HMGCS1-203ENST00000507004 Q96M66 194 aa11.4□□□□□ -0.58
HMGCS1-203ENST00000507004 MND1Q9BWT6 205 aa11.4□□□□□ -0.58
HMGCS1-203ENST00000507004 MBNL3Q9NUK0 354 aaKnown RBP11.4□□□□□ -0.58
HMGCS1-203ENST00000507004 MAGEA13PA6NCF6 341 aa11.39□□□□□ -0.59
HMGCS1-203ENST00000507004 HBZP02008 142 aa11.39□□□□□ -0.59
HMGCS1-203ENST00000507004 PRB2P02812 416 aaPredicted RBP11.39□□□□□ -0.59
HMGCS1-203ENST00000507004 GPR12P47775 334 aa11.39□□□□□ -0.59
HMGCS1-203ENST00000507004 REG1BP48304 166 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms