RNA–Protein interactions for RNA: ENST00000506941.1

NPHP4-210, Transcript of nephrocystin 4, humanhuman

TSL 4

Gene NPHP4, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-210ENST00000506941 RAB27BO00194 218 aa14.71□□□□□ -0.05
NPHP4-210ENST00000506941 F2RL2O00254 374 aa14.71□□□□□ -0.05
NPHP4-210ENST00000506941 LOXL3P58215 753 aa14.71□□□□□ -0.05
NPHP4-210ENST00000506941 VBP1P61758 197 aa14.71□□□□□ -0.05
NPHP4-210ENST00000506941 C6orf183Q5T699 404 aa14.71□□□□□ -0.05
NPHP4-210ENST00000506941 IDNKQ5T6J7 187 aa14.71□□□□□ -0.05
NPHP4-210ENST00000506941 Q6ZTK2 550 aa14.71□□□□□ -0.05
NPHP4-210ENST00000506941 TMEM86BQ8N661 226 aa14.71□□□□□ -0.05
NPHP4-210ENST00000506941 OR5H6Q8NGV6 325 aa14.71□□□□□ -0.05
NPHP4-210ENST00000506941 OR10R2Q8NGX6 335 aa14.71□□□□□ -0.05
NPHP4-210ENST00000506941 OR1L1Q8NH94 360 aa14.71□□□□□ -0.05
NPHP4-210ENST00000506941 MEGF9Q9H1U4 602 aa14.71□□□□□ -0.05
NPHP4-210ENST00000506941 POMT1Q9Y6A1 747 aa14.71□□□□□ -0.05
NPHP4-210ENST00000506941 IGHV3-43A0A0B4J1X8 118 aa14.7□□□□□ -0.06
NPHP4-210ENST00000506941 HBZP02008 142 aa14.7□□□□□ -0.06
NPHP4-210ENST00000506941 IGHV3-43DP0DP04 118 aa14.7□□□□□ -0.06
NPHP4-210ENST00000506941 HLA-DRB5Q30154 266 aa14.7□□□□□ -0.06
NPHP4-210ENST00000506941 MINOS1Q5TGZ0 78 aa14.7□□□□□ -0.06
NPHP4-210ENST00000506941 ZNF880Q6PDB4 577 aa14.7□□□□□ -0.06
NPHP4-210ENST00000506941 ANKRD13BQ86YJ7 626 aa14.7□□□□□ -0.06
NPHP4-210ENST00000506941 PRR18Q8N4B5 295 aa14.7□□□□□ -0.06
NPHP4-210ENST00000506941 TAF9BQ9HBM6 251 aa14.7□□□□□ -0.06
NPHP4-210ENST00000506941 PSG11Q9UQ72 335 aa14.7□□□□□ -0.06
NPHP4-210ENST00000506941 MINOS1-NBL1R4GNA1 71 aa14.7□□□□□ -0.06
NPHP4-210ENST00000506941 ANK2Q01484 3957 aa14.69□□□□□ -0.06
NPHP4-210ENST00000506941 J3QR06 171 aa14.69□□□□□ -0.06
NPHP4-210ENST00000506941 SDCBPO00560 298 aaPredicted RBP14.69□□□□□ -0.06
NPHP4-210ENST00000506941 GABARAPO95166 117 aa14.69□□□□□ -0.06
NPHP4-210ENST00000506941 GNG10P50151 68 aa14.69□□□□□ -0.06
NPHP4-210ENST00000506941 SSX2Q16385 188 aa14.69□□□□□ -0.06
NPHP4-210ENST00000506941 CTF1Q16619 201 aa14.69□□□□□ -0.06
NPHP4-210ENST00000506941 LRRC75BQ2VPJ9 315 aa14.69□□□□□ -0.06
NPHP4-210ENST00000506941 PLA1AQ53H76 456 aa14.69□□□□□ -0.06
NPHP4-210ENST00000506941 GPR107Q5VW38 600 aa14.69□□□□□ -0.06
NPHP4-210ENST00000506941 TRAT1Q6PIZ9 186 aa14.69□□□□□ -0.06
NPHP4-210ENST00000506941 OR52M1Q8NGK5 317 aa14.69□□□□□ -0.06
NPHP4-210ENST00000506941 OR9G1Q8NH87 305 aa14.69□□□□□ -0.06
NPHP4-210ENST00000506941 NDNFQ8TB73 568 aa14.69□□□□□ -0.06
NPHP4-210ENST00000506941 ZNF596Q8TC21 504 aa14.69□□□□□ -0.06
NPHP4-210ENST00000506941 TAF15Q92804 592 aaKnown RBP eCLIP14.69□□□□□ -0.06
NPHP4-210ENST00000506941 SLC25A38Q96DW6 304 aa14.69□□□□□ -0.06
NPHP4-210ENST00000506941 RAB3CQ96E17 227 aa14.69□□□□□ -0.06
NPHP4-210ENST00000506941 MALSU1Q96EH3 234 aa14.69□□□□□ -0.06
NPHP4-210ENST00000506941 SSX3Q99909 188 aa14.69□□□□□ -0.06
NPHP4-210ENST00000506941 ATG5Q9H1Y0 275 aa14.69□□□□□ -0.06
NPHP4-210ENST00000506941 DPAGT1Q9H3H5 408 aa14.69□□□□□ -0.06
NPHP4-210ENST00000506941 CHMP1AQ9HD42 196 aaPredicted RBP14.69□□□□□ -0.06
NPHP4-210ENST00000506941 GFOD1Q9NXC2 390 aa14.69□□□□□ -0.06
NPHP4-210ENST00000506941 HILPDAQ9Y5L2 63 aa14.69□□□□□ -0.06
NPHP4-210ENST00000506941 TRBV6-6A0A0A6YYG2 114 aa14.68□□□□□ -0.06
NPHP4-210ENST00000506941 A0A1W2PPE3 182 aa14.68□□□□□ -0.06
NPHP4-210ENST00000506941 METTL21EPA6NDL7 271 aa14.68□□□□□ -0.06
NPHP4-210ENST00000506941 H3BUX3 64 aa14.68□□□□□ -0.06
NPHP4-210ENST00000506941 MFNGO00587 321 aa14.68□□□□□ -0.06
NPHP4-210ENST00000506941 TOR1AO14656 332 aa14.68□□□□□ -0.06
NPHP4-210ENST00000506941 SPINT2O43291 252 aa14.68□□□□□ -0.06
NPHP4-210ENST00000506941 GNB3P16520 340 aa14.68□□□□□ -0.06
NPHP4-210ENST00000506941 HTR1DP28221 377 aa14.68□□□□□ -0.06
NPHP4-210ENST00000506941 SERPINB10P48595 397 aa14.68□□□□□ -0.06
NPHP4-210ENST00000506941 HMGN3Q15651 99 aa14.68□□□□□ -0.06
NPHP4-210ENST00000506941 C16orf87Q6PH81 154 aa14.68□□□□□ -0.06
NPHP4-210ENST00000506941 GPR141Q7Z602 305 aa14.68□□□□□ -0.06
NPHP4-210ENST00000506941 ZNF554Q86TJ5 538 aa14.68□□□□□ -0.06
NPHP4-210ENST00000506941 PIFOQ8TCI5 191 aa14.68□□□□□ -0.06
NPHP4-210ENST00000506941 MMP28Q9H239 520 aa14.68□□□□□ -0.06
NPHP4-210ENST00000506941 RHBDL2Q9NX52 303 aa14.68□□□□□ -0.06
NPHP4-210ENST00000506941 A0A075B6Q4 140 aa14.67□□□□□ -0.06
NPHP4-210ENST00000506941 FAM181BA6NEQ2 426 aa14.67□□□□□ -0.06
NPHP4-210ENST00000506941 VGLL3A8MV65 326 aa14.67□□□□□ -0.06
NPHP4-210ENST00000506941 LY6LH3BQJ8 138 aa14.67□□□□□ -0.06
NPHP4-210ENST00000506941 BUB1B-PAK6H3BSN5 160 aa14.67□□□□□ -0.06
NPHP4-210ENST00000506941 HIST1H1DP16402 221 aaKnown RBP14.67□□□□□ -0.06
NPHP4-210ENST00000506941 PRRX1P54821 245 aa14.67□□□□□ -0.06
NPHP4-210ENST00000506941 SCAND1P57086 179 aa14.67□□□□□ -0.06
NPHP4-210ENST00000506941 GNMTQ14749 295 aa14.67□□□□□ -0.06
NPHP4-210ENST00000506941 FAM189A2Q15884 450 aa14.67□□□□□ -0.06
NPHP4-210ENST00000506941 AANATQ16613 207 aa14.67□□□□□ -0.06
NPHP4-210ENST00000506941 SETD6Q8TBK2 473 aa14.67□□□□□ -0.06
NPHP4-210ENST00000506941 SLC25A46Q96AG3 418 aa14.67□□□□□ -0.06
NPHP4-210ENST00000506941 CMSS1Q9BQ75 279 aaKnown RBP14.67□□□□□ -0.06
NPHP4-210ENST00000506941 C12orf4Q9NQ89 552 aa14.67□□□□□ -0.06
NPHP4-210ENST00000506941 KCNIP1Q9NZI2 227 aa14.67□□□□□ -0.06
NPHP4-210ENST00000506941 DPM3Q9P2X0 92 aa14.67□□□□□ -0.06
NPHP4-210ENST00000506941 VPREB3Q9UKI3 123 aa14.67□□□□□ -0.06
NPHP4-210ENST00000506941 ELF5Q9UKW6 265 aaPredicted RBP14.67□□□□□ -0.06
NPHP4-210ENST00000506941 ETV7Q9Y603 341 aa14.67□□□□□ -0.06
NPHP4-210ENST00000506941 GPR137BO60478 399 aa14.66□□□□□ -0.06
NPHP4-210ENST00000506941 RAB13P51153 203 aa14.66□□□□□ -0.06
NPHP4-210ENST00000506941 ACTG1P63261 375 aa14.66□□□□□ -0.06
NPHP4-210ENST00000506941 MOB1BQ7L9L4 216 aa14.66□□□□□ -0.06
NPHP4-210ENST00000506941 CROCCP3Q8IVE0 287 aa14.66□□□□□ -0.06
NPHP4-210ENST00000506941 ZNF439Q8NDP4 499 aa14.66□□□□□ -0.06
NPHP4-210ENST00000506941 OR10V1Q8NGI7 309 aa14.66□□□□□ -0.06
NPHP4-210ENST00000506941 OR5R1Q8NH85 324 aa14.66□□□□□ -0.06
NPHP4-210ENST00000506941 RIMS4Q9H426 269 aaPredicted RBP14.66□□□□□ -0.06
NPHP4-210ENST00000506941 LEUTXA8MZ59 168 aa14.65□□□□□ -0.06
NPHP4-210ENST00000506941 SLC31A2O15432 143 aa14.65□□□□□ -0.06
NPHP4-210ENST00000506941 LY6EQ16553 131 aa14.65□□□□□ -0.06
NPHP4-210ENST00000506941 TMEM30BQ3MIR4 351 aa14.65□□□□□ -0.06
NPHP4-210ENST00000506941 TPTE2P1Q5T6R2 138 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms