RNA–Protein interactions for RNA: ENST00000506874.1

SNX2-205, Transcript of sorting nexin 2, humanhuman

TSL 3

Gene SNX2, Length 200 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-205ENST00000506874 GFI1Q99684 422 aa12.91□□□□□ -0.34
SNX2-205ENST00000506874 DPCDQ9BVM2 203 aaPredicted RBP12.91□□□□□ -0.34
SNX2-205ENST00000506874 IFT22Q9H7X7 185 aa12.91□□□□□ -0.34
SNX2-205ENST00000506874 COL7A1Q02388 2944 aa12.9□□□□□ -0.34
SNX2-205ENST00000506874 CCRL2O00421 344 aa12.9□□□□□ -0.34
SNX2-205ENST00000506874 CRTAPO75718 401 aaPredicted RBP12.9□□□□□ -0.34
SNX2-205ENST00000506874 CD37P11049 281 aa12.9□□□□□ -0.34
SNX2-205ENST00000506874 MGMTP16455 207 aa12.9□□□□□ -0.34
SNX2-205ENST00000506874 ATAD3CQ5T2N8 411 aa12.9□□□□□ -0.34
SNX2-205ENST00000506874 CREB3L1Q96BA8 519 aa12.9□□□□□ -0.34
SNX2-205ENST00000506874 SELENOIQ9C0D9 397 aa12.9□□□□□ -0.34
SNX2-205ENST00000506874 KIF25Q9UIL4 384 aa12.9□□□□□ -0.34
SNX2-205ENST00000506874 AK6Q9Y3D8 172 aaKnown RBP12.9□□□□□ -0.34
SNX2-205ENST00000506874 TRDV1A0A1B0GX56 115 aa12.89□□□□□ -0.35
SNX2-205ENST00000506874 PSMB11A5LHX3 300 aa12.89□□□□□ -0.35
SNX2-205ENST00000506874 SLC22A1O15245 554 aa12.89□□□□□ -0.35
SNX2-205ENST00000506874 IGHV3-7P01780 117 aa12.89□□□□□ -0.35
SNX2-205ENST00000506874 UBBP0CG47 229 aa12.89□□□□□ -0.35
SNX2-205ENST00000506874 HTR2CP28335 458 aa12.89□□□□□ -0.35
SNX2-205ENST00000506874 CD34P28906 385 aa12.89□□□□□ -0.35
SNX2-205ENST00000506874 MNDAP41218 407 aa12.89□□□□□ -0.35
SNX2-205ENST00000506874 C17orf58Q2M2W7 97 aa12.89□□□□□ -0.35
SNX2-205ENST00000506874 RSBN1Q5VWQ0 802 aaPredicted RBP12.89□□□□□ -0.35
SNX2-205ENST00000506874 CD200R1LQ6Q8B3 271 aa12.89□□□□□ -0.35
SNX2-205ENST00000506874 ZNF329Q86UD4 541 aa12.89□□□□□ -0.35
SNX2-205ENST00000506874 FAM46BQ96A09 425 aa12.89□□□□□ -0.35
SNX2-205ENST00000506874 BARHL1Q9BZE3 327 aa12.89□□□□□ -0.35
SNX2-205ENST00000506874 GHRLQ9UBU3 117 aa12.89□□□□□ -0.35
SNX2-205ENST00000506874 KMT2CQ8NEZ4 4911 aaKnown RBP12.88□□□□□ -0.35
SNX2-205ENST00000506874 MEIKINA0A087WXM9 373 aa12.88□□□□□ -0.35
SNX2-205ENST00000506874 ZNF729A6NN14 1252 aaPredicted RBP12.88□□□□□ -0.35
SNX2-205ENST00000506874 LY6LH3BQJ8 138 aa12.88□□□□□ -0.35
SNX2-205ENST00000506874 DUS4LO95620 317 aaKnown RBP12.88□□□□□ -0.35
SNX2-205ENST00000506874 GLP1RP43220 463 aa12.88□□□□□ -0.35
SNX2-205ENST00000506874 KCNJ3P48549 501 aa12.88□□□□□ -0.35
SNX2-205ENST00000506874 P2RY14Q15391 338 aa12.88□□□□□ -0.35
SNX2-205ENST00000506874 NEDD8Q15843 81 aa12.88□□□□□ -0.35
SNX2-205ENST00000506874 OR10K2Q6IF99 312 aa12.88□□□□□ -0.35
SNX2-205ENST00000506874 CCDC144NLQ6NUI1 221 aa12.88□□□□□ -0.35
SNX2-205ENST00000506874 LINC00482Q8N8I6 264 aa12.88□□□□□ -0.35
SNX2-205ENST00000506874 OR6M1Q8NGM8 313 aa12.88□□□□□ -0.35
SNX2-205ENST00000506874 LEAP2Q969E1 77 aa12.88□□□□□ -0.35
SNX2-205ENST00000506874 TOMM40LQ969M1 308 aa12.88□□□□□ -0.35
SNX2-205ENST00000506874 RPEQ96AT9 228 aa12.88□□□□□ -0.35
SNX2-205ENST00000506874 Q96M66 194 aa12.88□□□□□ -0.35
SNX2-205ENST00000506874 CST11Q9H112 138 aa12.88□□□□□ -0.35
SNX2-205ENST00000506874 KCNK15Q9H427 330 aa12.88□□□□□ -0.35
SNX2-205ENST00000506874 NCOR1P1Q9H4R4 102 aa12.88□□□□□ -0.35
SNX2-205ENST00000506874 PLGRKTQ9HBL7 147 aa12.88□□□□□ -0.35
SNX2-205ENST00000506874 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.88□□□□□ -0.35
SNX2-205ENST00000506874 OR6C3Q9NZP0 311 aa12.88□□□□□ -0.35
SNX2-205ENST00000506874 RCC2Q9P258 522 aaKnown RBP12.88□□□□□ -0.35
SNX2-205ENST00000506874 MOB4Q9Y3A3 225 aa12.88□□□□□ -0.35
SNX2-205ENST00000506874 DNAH9Q9NYC9 4486 aa12.88□□□□□ -0.35
SNX2-205ENST00000506874 SHISA3A0PJX4 238 aa12.87□□□□□ -0.35
SNX2-205ENST00000506874 FAM90A10PA6NDY2 464 aa12.87□□□□□ -0.35
SNX2-205ENST00000506874 FAM90A18PA6NE21 464 aa12.87□□□□□ -0.35
SNX2-205ENST00000506874 FAM90A16PA6NEW6 464 aa12.87□□□□□ -0.35
SNX2-205ENST00000506874 FAM90A20PA6NIJ5 464 aa12.87□□□□□ -0.35
SNX2-205ENST00000506874 FAM90A7PA6NKC0 464 aa12.87□□□□□ -0.35
SNX2-205ENST00000506874 FAM90A12PA8MX19 464 aa12.87□□□□□ -0.35
SNX2-205ENST00000506874 FAM90A5PA8MXJ8 464 aa12.87□□□□□ -0.35
SNX2-205ENST00000506874 FAM90A23PA8MXZ1 464 aa12.87□□□□□ -0.35
SNX2-205ENST00000506874 M0QZK8 103 aa12.87□□□□□ -0.35
SNX2-205ENST00000506874 SLC17A2O00624 439 aa12.87□□□□□ -0.35
SNX2-205ENST00000506874 SNRNP70P08621 437 aaKnown RBP12.87□□□□□ -0.35
SNX2-205ENST00000506874 FAM90A15PP0C7V4 464 aa12.87□□□□□ -0.35
SNX2-205ENST00000506874 FAM90A13PP0C7W8 464 aa12.87□□□□□ -0.35
SNX2-205ENST00000506874 FAM90A14PP0C7W9 464 aa12.87□□□□□ -0.35
SNX2-205ENST00000506874 FAM90A24PP0C7X0 464 aa12.87□□□□□ -0.35
SNX2-205ENST00000506874 FAM106CPP0CH98 169 aa12.87□□□□□ -0.35
SNX2-205ENST00000506874 VSIG8P0DPA2 414 aa12.87□□□□□ -0.35
SNX2-205ENST00000506874 GALP22466 123 aa12.87□□□□□ -0.35
SNX2-205ENST00000506874 PAX5Q02548 391 aa12.87□□□□□ -0.35
SNX2-205ENST00000506874 HES1Q14469 280 aa12.87□□□□□ -0.35
SNX2-205ENST00000506874 HNF4GQ14541 408 aa12.87□□□□□ -0.35
SNX2-205ENST00000506874 LTC4SQ16873 150 aa12.87□□□□□ -0.35
SNX2-205ENST00000506874 SYT6Q5T7P8 510 aaPredicted RBP12.87□□□□□ -0.35
SNX2-205ENST00000506874 C22orf42Q6IC83 251 aa12.87□□□□□ -0.35
SNX2-205ENST00000506874 RAB12Q6IQ22 244 aa12.87□□□□□ -0.35
SNX2-205ENST00000506874 C18orf65Q6ZTR6 163 aa12.87□□□□□ -0.35
SNX2-205ENST00000506874 MRPL41Q8IXM3 137 aaKnown RBP12.87□□□□□ -0.35
SNX2-205ENST00000506874 OR13A1Q8NGR1 328 aa12.87□□□□□ -0.35
SNX2-205ENST00000506874 OR56B4Q8NH76 319 aa12.87□□□□□ -0.35
SNX2-205ENST00000506874 OR9G1Q8NH87 305 aa12.87□□□□□ -0.35
SNX2-205ENST00000506874 NEK7Q8TDX7 302 aa12.87□□□□□ -0.35
SNX2-205ENST00000506874 NOL4LQ96MY1 436 aaPredicted RBP12.87□□□□□ -0.35
SNX2-205ENST00000506874 SPACA1Q9HBV2 294 aa12.87□□□□□ -0.35
SNX2-205ENST00000506874 A0A087X0M5 115 aa12.86□□□□□ -0.35
SNX2-205ENST00000506874 TRAV1-2A0A0B4J238 106 aa12.86□□□□□ -0.35
SNX2-205ENST00000506874 TRAV39A0A0B4J263 110 aa12.86□□□□□ -0.35
SNX2-205ENST00000506874 KBTBD11-OT1A0A1B0GTJ5 212 aa12.86□□□□□ -0.35
SNX2-205ENST00000506874 A0A1B0GX30 115 aa12.86□□□□□ -0.35
SNX2-205ENST00000506874 TMEM30CPA0ZSE6 113 aa12.86□□□□□ -0.35
SNX2-205ENST00000506874 OOSP1A8MZH6 123 aa12.86□□□□□ -0.35
SNX2-205ENST00000506874 BPNT1O95861 308 aa12.86□□□□□ -0.35
SNX2-205ENST00000506874 CGB3P0DN86 165 aa12.86□□□□□ -0.35
SNX2-205ENST00000506874 CGB7P0DN87 165 aa12.86□□□□□ -0.35
SNX2-205ENST00000506874 QRFPP83859 136 aa12.86□□□□□ -0.35
SNX2-205ENST00000506874 CD69Q07108 199 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms