RNA–Protein interactions for RNA: ENST00000506515.1

HERC4-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-213ENST00000506515 KIFC1Q9BW19 673 aa3.55□□□□□ -1.84
HERC4-213ENST00000506515 GOLPH3Q9H4A6 298 aa3.55□□□□□ -1.84
HERC4-213ENST00000506515 ELOVL6Q9H5J4 265 aa3.55□□□□□ -1.84
HERC4-213ENST00000506515 PDP1Q9P0J1 537 aaPredicted RBP3.55□□□□□ -1.84
HERC4-213ENST00000506515 ZNRD1Q9P1U0 126 aa3.55□□□□□ -1.84
HERC4-213ENST00000506515 RABL2AQ9UBK7 228 aaPredicted RBP3.55□□□□□ -1.84
HERC4-213ENST00000506515 TBC1D24Q9ULP9 559 aa3.55□□□□□ -1.84
HERC4-213ENST00000506515 CHCHD2Q9Y6H1 151 aaPredicted RBP3.55□□□□□ -1.84
HERC4-213ENST00000506515 HEATR1Q9H583 2144 aaKnown RBP3.55□□□□□ -1.84
HERC4-213ENST00000506515 IGLV4-60A0A075B6I1 120 aa3.54□□□□□ -1.84
HERC4-213ENST00000506515 ZNF860A6NHJ4 632 aa3.54□□□□□ -1.84
HERC4-213ENST00000506515 MIF4GDA9UHW6 222 aaKnown RBP3.54□□□□□ -1.84
HERC4-213ENST00000506515 H7C417 338 aa3.54□□□□□ -1.84
HERC4-213ENST00000506515 ERI3O43414 337 aaKnown RBP3.54□□□□□ -1.84
HERC4-213ENST00000506515 VAPBO95292 243 aa3.54□□□□□ -1.84
HERC4-213ENST00000506515 SLC35E2BP0CK96 405 aa3.54□□□□□ -1.84
HERC4-213ENST00000506515 C1GALT1C1LP0DN25 315 aa3.54□□□□□ -1.84
HERC4-213ENST00000506515 CPN2P22792 545 aa3.54□□□□□ -1.84
HERC4-213ENST00000506515 DTYMKP23919 212 aa3.54□□□□□ -1.84
HERC4-213ENST00000506515 COILP38432 576 aaPredicted RBP3.54□□□□□ -1.84
HERC4-213ENST00000506515 MAGEA1P43355 309 aa3.54□□□□□ -1.84
HERC4-213ENST00000506515 EFNA4P52798 201 aa3.54□□□□□ -1.84
HERC4-213ENST00000506515 CDKN2DP55273 166 aa3.54□□□□□ -1.84
HERC4-213ENST00000506515 UBE2MP61081 183 aaKnown RBP3.54□□□□□ -1.84
HERC4-213ENST00000506515 TBPL1P62380 186 aa3.54□□□□□ -1.84
HERC4-213ENST00000506515 ACTG1P63261 375 aa3.54□□□□□ -1.84
HERC4-213ENST00000506515 IFT88Q13099 833 aa3.54□□□□□ -1.84
HERC4-213ENST00000506515 EIF4EBP1Q13541 118 aaPredicted RBP3.54□□□□□ -1.84
HERC4-213ENST00000506515 SMUG1Q53HV7 270 aa3.54□□□□□ -1.84
HERC4-213ENST00000506515 CDKL4Q5MAI5 379 aa3.54□□□□□ -1.84
HERC4-213ENST00000506515 TPTE2P1Q5T6R2 138 aa3.54□□□□□ -1.84
HERC4-213ENST00000506515 CYHR1Q6ZMK1 362 aa3.54□□□□□ -1.84
HERC4-213ENST00000506515 NTM-AS1Q6ZSK4 140 aa3.54□□□□□ -1.84
HERC4-213ENST00000506515 PLCZ1Q86YW0 608 aa3.54□□□□□ -1.84
HERC4-213ENST00000506515 TCAIMQ8N3R3 496 aa3.54□□□□□ -1.84
HERC4-213ENST00000506515 JAGN1Q8N5M9 183 aa3.54□□□□□ -1.84
HERC4-213ENST00000506515 SNX31Q8N9S9 440 aa3.54□□□□□ -1.84
HERC4-213ENST00000506515 COQ8AQ8NI60 647 aa3.54□□□□□ -1.84
HERC4-213ENST00000506515 ZNF721Q8TF20 911 aa3.54□□□□□ -1.84
HERC4-213ENST00000506515 KCTD4Q8WVF5 259 aa3.54□□□□□ -1.84
HERC4-213ENST00000506515 FRZBQ92765 325 aa3.54□□□□□ -1.84
HERC4-213ENST00000506515 ANKRD60Q9BZ19 345 aa3.54□□□□□ -1.84
HERC4-213ENST00000506515 NTN4Q9HB63 628 aa3.54□□□□□ -1.84
HERC4-213ENST00000506515 WFDC1Q9HC57 220 aa3.54□□□□□ -1.84
HERC4-213ENST00000506515 CHRAC1Q9NRG0 131 aa3.54□□□□□ -1.84
HERC4-213ENST00000506515 TREX1Q9NSU2 369 aa3.54□□□□□ -1.84
HERC4-213ENST00000506515 NECAP2Q9NVZ3 263 aa3.54□□□□□ -1.84
HERC4-213ENST00000506515 AHSPQ9NZD4 102 aa3.54□□□□□ -1.84
HERC4-213ENST00000506515 MTFP1Q9UDX5 166 aa3.54□□□□□ -1.84
HERC4-213ENST00000506515 FBXO5Q9UKT4 447 aa3.54□□□□□ -1.84
HERC4-213ENST00000506515 MCTS1Q9ULC4 181 aaKnown RBP3.54□□□□□ -1.84
HERC4-213ENST00000506515 TMEM14AQ9Y6G1 99 aa3.54□□□□□ -1.84
HERC4-213ENST00000506515 MGAM2Q2M2H8 2515 aa3.54□□□□□ -1.84
HERC4-213ENST00000506515 YLPM1P49750 1951 aaKnown RBP3.54□□□□□ -1.84
HERC4-213ENST00000506515 OR51F1A6NGY5 319 aa3.53□□□□□ -1.84
HERC4-213ENST00000506515 M0R3G1 203 aa3.53□□□□□ -1.84
HERC4-213ENST00000506515 NIPSNAP2O75323 286 aa3.53□□□□□ -1.84
HERC4-213ENST00000506515 AQP8O94778 261 aa3.53□□□□□ -1.84
HERC4-213ENST00000506515 VAMP5O95183 116 aa3.53□□□□□ -1.84
HERC4-213ENST00000506515 GPR75O95800 540 aa3.53□□□□□ -1.84
HERC4-213ENST00000506515 HBE1P02100 147 aa3.53□□□□□ -1.84
HERC4-213ENST00000506515 ZNF708P17019 499 aa3.53□□□□□ -1.84
HERC4-213ENST00000506515 CTRB1P17538 263 aa3.53□□□□□ -1.84
HERC4-213ENST00000506515 IL32P24001 234 aa3.53□□□□□ -1.84
HERC4-213ENST00000506515 RPS5P46782 204 aaKnown RBP3.53□□□□□ -1.84
HERC4-213ENST00000506515 RAB7AP51149 207 aa3.53□□□□□ -1.84
HERC4-213ENST00000506515 DSCR4P56555 118 aaPredicted RBP3.53□□□□□ -1.84
HERC4-213ENST00000506515 NCMAPQ5T1S8 102 aa3.53□□□□□ -1.84
HERC4-213ENST00000506515 FBXW9Q5XUX1 488 aa3.53□□□□□ -1.84
HERC4-213ENST00000506515 ANGPTL8Q6UXH0 198 aa3.53□□□□□ -1.84
HERC4-213ENST00000506515 CALHM1Q8IU99 346 aa3.53□□□□□ -1.84
HERC4-213ENST00000506515 CBLN2Q8IUK8 224 aa3.53□□□□□ -1.84
HERC4-213ENST00000506515 OR52E5Q8NH55 327 aa3.53□□□□□ -1.84
HERC4-213ENST00000506515 AGR3Q8TD06 166 aa3.53□□□□□ -1.84
HERC4-213ENST00000506515 C15orf40Q8WUR7 153 aa3.53□□□□□ -1.84
HERC4-213ENST00000506515 MS4A6EQ96DS6 147 aa3.53□□□□□ -1.84
HERC4-213ENST00000506515 ZNF317Q96PQ6 595 aaPredicted RBP3.53□□□□□ -1.84
HERC4-213ENST00000506515 EFCAB11Q9BUY7 163 aa3.53□□□□□ -1.84
HERC4-213ENST00000506515 RNF122Q9H9V4 155 aa3.53□□□□□ -1.84
HERC4-213ENST00000506515 CBLN4Q9NTU7 201 aa3.53□□□□□ -1.84
HERC4-213ENST00000506515 MRPL22Q9NWU5 206 aaKnown RBP3.53□□□□□ -1.84
HERC4-213ENST00000506515 OR6C70A6NIJ9 312 aa3.52□□□□□ -1.85
HERC4-213ENST00000506515 H7C1H1 209 aa3.52□□□□□ -1.85
HERC4-213ENST00000506515 TTC4O95801 387 aa3.52□□□□□ -1.85
HERC4-213ENST00000506515 MLNP12872 115 aa3.52□□□□□ -1.85
HERC4-213ENST00000506515 ME2P23368 584 aa3.52□□□□□ -1.85
HERC4-213ENST00000506515 PSMD4P55036 377 aaKnown RBP3.52□□□□□ -1.85
HERC4-213ENST00000506515 RPS23P62266 143 aaKnown RBP3.52□□□□□ -1.85
HERC4-213ENST00000506515 REEP5Q00765 189 aa3.52□□□□□ -1.85
HERC4-213ENST00000506515 DEFA6Q01524 100 aa3.52□□□□□ -1.85
HERC4-213ENST00000506515 DGCR6Q14129 220 aa3.52□□□□□ -1.85
HERC4-213ENST00000506515 COMMD1Q8N668 190 aa3.52□□□□□ -1.85
HERC4-213ENST00000506515 COX18Q8N8Q8 333 aa3.52□□□□□ -1.85
HERC4-213ENST00000506515 OR11H7Q8NGC8 314 aa3.52□□□□□ -1.85
HERC4-213ENST00000506515 OR8U1Q8NH10 309 aa3.52□□□□□ -1.85
HERC4-213ENST00000506515 CAMK2N2Q96S95 79 aa3.52□□□□□ -1.85
HERC4-213ENST00000506515 DHRS9Q9BPW9 319 aa3.52□□□□□ -1.85
HERC4-213ENST00000506515 OSBPL11Q9BXB4 747 aa3.52□□□□□ -1.85
HERC4-213ENST00000506515 IQCGQ9H095 443 aaKnown RBP3.52□□□□□ -1.85
HERC4-213ENST00000506515 PROK2Q9HC23 129 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms