RNA–Protein interactions for RNA: ENST00000504761.6

TCOF1-207, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 4,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-207ENST00000504761 ZNF154Q13106 437 aa12.08□□□□□ -0.48
TCOF1-207ENST00000504761 FAM201AQ5SY85 155 aa12.08□□□□□ -0.48
TCOF1-207ENST00000504761 ACY3Q96HD9 319 aa12.08□□□□□ -0.48
TCOF1-207ENST00000504761 LYZL4Q96KX0 146 aa12.08□□□□□ -0.48
TCOF1-207ENST00000504761 GFI1Q99684 422 aa12.08□□□□□ -0.48
TCOF1-207ENST00000504761 ZNF251Q9BRH9 671 aa12.08□□□□□ -0.48
TCOF1-207ENST00000504761 ABCA1O95477 2261 aa12.08□□□□□ -0.48
TCOF1-207ENST00000504761 CYB5BO43169 146 aa12.08□□□□□ -0.48
TCOF1-207ENST00000504761 CYB5R3P00387 301 aaPredicted RBP12.08□□□□□ -0.48
TCOF1-207ENST00000504761 TMEM50BP56557 158 aa12.08□□□□□ -0.48
TCOF1-207ENST00000504761 Q5BKY6 102 aa12.08□□□□□ -0.48
TCOF1-207ENST00000504761 FAM122CQ6P4D5 195 aa12.08□□□□□ -0.48
TCOF1-207ENST00000504761 SLC35E1Q96K37 410 aa12.08□□□□□ -0.48
TCOF1-207ENST00000504761 CIB3Q96Q77 187 aaPredicted RBP12.08□□□□□ -0.48
TCOF1-207ENST00000504761 SFXN3Q9BWM7 321 aa12.08□□□□□ -0.48
TCOF1-207ENST00000504761 GPR132Q9UNW8 380 aa12.08□□□□□ -0.48
TCOF1-207ENST00000504761 NOTCH3Q9UM47 2321 aa12.08□□□□□ -0.48
TCOF1-207ENST00000504761 NCBP2LA6PVI3 153 aaKnown RBP12.08□□□□□ -0.48
TCOF1-207ENST00000504761 OR4A4PQ8NGN8 299 aa12.08□□□□□ -0.48
TCOF1-207ENST00000504761 OR1L1Q8NH94 360 aa12.08□□□□□ -0.48
TCOF1-207ENST00000504761 ASB13Q8WXK3 278 aa12.08□□□□□ -0.48
TCOF1-207ENST00000504761 LOC390937A0A1W2PQ73 354 aa12.07□□□□□ -0.48
TCOF1-207ENST00000504761 FAM157AC9JC47 383 aa12.07□□□□□ -0.48
TCOF1-207ENST00000504761 OR5G3P0C626 314 aa12.07□□□□□ -0.48
TCOF1-207ENST00000504761 HOXB1P14653 301 aaPredicted RBP12.07□□□□□ -0.48
TCOF1-207ENST00000504761 PLA2G2CQ5R387 149 aa12.07□□□□□ -0.48
TCOF1-207ENST00000504761 REPIN1Q9BWE0 567 aaKnown RBP12.07□□□□□ -0.48
TCOF1-207ENST00000504761 IL36GQ9NZH8 169 aa12.07□□□□□ -0.48
TCOF1-207ENST00000504761 FAM96BQ9Y3D0 163 aa12.07□□□□□ -0.48
TCOF1-207ENST00000504761 URGCP-MRPS24S4R325 110 aa12.07□□□□□ -0.48
TCOF1-207ENST00000504761 PPIAL4EA0A075B759 164 aa12.07□□□□□ -0.48
TCOF1-207ENST00000504761 PPIAL4DF5H284 164 aa12.07□□□□□ -0.48
TCOF1-207ENST00000504761 MFNGO00587 321 aa12.07□□□□□ -0.48
TCOF1-207ENST00000504761 HBZP02008 142 aa12.07□□□□□ -0.48
TCOF1-207ENST00000504761 PPIAL4FP0DN26 164 aa12.07□□□□□ -0.48
TCOF1-207ENST00000504761 OR2B8PP59922 312 aa12.07□□□□□ -0.48
TCOF1-207ENST00000504761 RNFT1Q5M7Z0 435 aa12.07□□□□□ -0.48
TCOF1-207ENST00000504761 PPIAL4AQ9Y536 164 aa12.07□□□□□ -0.48
TCOF1-207ENST00000504761 G6PCP35575 357 aa12.07□□□□□ -0.48
TCOF1-207ENST00000504761 SUB1P53999 127 aaKnown RBP eCLIP12.07□□□□□ -0.48
TCOF1-207ENST00000504761 RAB5BP61020 215 aa12.07□□□□□ -0.48
TCOF1-207ENST00000504761 POM121L2Q96KW2 1035 aa12.07□□□□□ -0.48
TCOF1-207ENST00000504761 FOXD3Q9UJU5 478 aaPredicted RBP12.07□□□□□ -0.48
TCOF1-207ENST00000504761 V9GYS6 101 aa12.07□□□□□ -0.48
TCOF1-207ENST00000504761 BRCA2P51587 3418 aa12.07□□□□□ -0.48
TCOF1-207ENST00000504761 SMPD2O60906 423 aa12.07□□□□□ -0.48
TCOF1-207ENST00000504761 CA11O75493 328 aa12.07□□□□□ -0.48
TCOF1-207ENST00000504761 MPV17P39210 176 aa12.07□□□□□ -0.48
TCOF1-207ENST00000504761 IL13RA2Q14627 380 aa12.07□□□□□ -0.48
TCOF1-207ENST00000504761 AVPI1Q5T686 147 aa12.07□□□□□ -0.48
TCOF1-207ENST00000504761 HRASP01112 189 aa12.06□□□□□ -0.48
TCOF1-207ENST00000504761 ID4P47928 161 aa12.06□□□□□ -0.48
TCOF1-207ENST00000504761 RXFP4Q8TDU9 374 aa12.06□□□□□ -0.48
TCOF1-207ENST00000504761 OR5P3Q8WZ94 311 aa12.06□□□□□ -0.48
TCOF1-207ENST00000504761 C1QTNF5Q9BXJ0 243 aa12.06□□□□□ -0.48
TCOF1-207ENST00000504761 ALX4Q9H161 411 aaPredicted RBP12.06□□□□□ -0.48
TCOF1-207ENST00000504761 GP6Q9HCN6 339 aa12.06□□□□□ -0.48
TCOF1-207ENST00000504761 NPDC1Q9NQX5 325 aaPredicted RBP12.06□□□□□ -0.48
TCOF1-207ENST00000504761 CEP295Q9C0D2 2601 aa12.06□□□□□ -0.48
TCOF1-207ENST00000504761 H0YL77 283 aa12.06□□□□□ -0.48
TCOF1-207ENST00000504761 IGFBP3P17936 291 aaPredicted RBP12.06□□□□□ -0.48
TCOF1-207ENST00000504761 FGF7P21781 194 aa12.06□□□□□ -0.48
TCOF1-207ENST00000504761 GLIPR1P48060 266 aa12.06□□□□□ -0.48
TCOF1-207ENST00000504761 NUBP1P53384 320 aa12.06□□□□□ -0.48
TCOF1-207ENST00000504761 PXDC1Q5TGL8 231 aa12.06□□□□□ -0.48
TCOF1-207ENST00000504761 ASPHD2Q6ICH7 369 aa12.06□□□□□ -0.48
TCOF1-207ENST00000504761 TRAT1Q6PIZ9 186 aa12.06□□□□□ -0.48
TCOF1-207ENST00000504761 IL34Q6ZMJ4 242 aa12.06□□□□□ -0.48
TCOF1-207ENST00000504761 LEAP2Q969E1 77 aa12.06□□□□□ -0.48
TCOF1-207ENST00000504761 NIPSNAP3BQ9BS92 247 aa12.06□□□□□ -0.48
TCOF1-207ENST00000504761 SLC35D1Q9NTN3 355 aa12.06□□□□□ -0.48
TCOF1-207ENST00000504761 OBSL1O75147 1896 aa12.06□□□□□ -0.48
TCOF1-207ENST00000504761 HMSDA8MTL9 139 aa12.06□□□□□ -0.48
TCOF1-207ENST00000504761 PRSS44E7EML9 344 aa12.06□□□□□ -0.48
TCOF1-207ENST00000504761 CST4P01036 141 aa12.06□□□□□ -0.48
TCOF1-207ENST00000504761 RAB7AP51149 207 aa12.06□□□□□ -0.48
TCOF1-207ENST00000504761 ZCCHC24Q8N2G6 241 aaKnown RBP12.06□□□□□ -0.48
TCOF1-207ENST00000504761 ZNRF1Q8ND25 227 aa12.06□□□□□ -0.48
TCOF1-207ENST00000504761 PRO3102Q9H379 93 aa12.06□□□□□ -0.48
TCOF1-207ENST00000504761 SLC25A10Q9UBX3 287 aaPredicted RBP12.06□□□□□ -0.48
TCOF1-207ENST00000504761 RPS10-NUDT3A0A1W2PQS6 291 aa12.05□□□□□ -0.48
TCOF1-207ENST00000504761 C1orf196B1AJZ1 125 aa12.05□□□□□ -0.48
TCOF1-207ENST00000504761 RPS10P46783 165 aaKnown RBP12.05□□□□□ -0.48
TCOF1-207ENST00000504761 ADIRFQ15847 76 aa12.05□□□□□ -0.48
TCOF1-207ENST00000504761 GPR137Q96N19 417 aa12.05□□□□□ -0.48
TCOF1-207ENST00000504761 C5orf66Q9H5L9 145 aa12.05□□□□□ -0.48
TCOF1-207ENST00000504761 NPTNQ9Y639 398 aa12.05□□□□□ -0.48
TCOF1-207ENST00000504761 PSMB3P49720 205 aa12.05□□□□□ -0.48
TCOF1-207ENST00000504761 TIMM23BQ5SRD1 257 aa12.05□□□□□ -0.48
TCOF1-207ENST00000504761 RNF144BQ7Z419 303 aa12.05□□□□□ -0.48
TCOF1-207ENST00000504761 NABP1Q96AH0 204 aa12.05□□□□□ -0.48
TCOF1-207ENST00000504761 R3HDM4Q96D70 268 aa12.05□□□□□ -0.48
TCOF1-207ENST00000504761 WBP1Q96G27 269 aa12.05□□□□□ -0.48
TCOF1-207ENST00000504761 MTCH1Q9NZJ7 389 aa12.05□□□□□ -0.48
TCOF1-207ENST00000504761 CLN8Q9UBY8 286 aa12.05□□□□□ -0.48
TCOF1-207ENST00000504761 RALYQ9UKM9 306 aaKnown RBP12.05□□□□□ -0.48
TCOF1-207ENST00000504761 APELAP0DMC3 54 aa12.05□□□□□ -0.48
TCOF1-207ENST00000504761 H2BFSP57053 126 aa12.05□□□□□ -0.48
TCOF1-207ENST00000504761 B3GALT5-AS1P59052 145 aa12.05□□□□□ -0.48
TCOF1-207ENST00000504761 LY6DQ14210 128 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms