RNA–Protein interactions for RNA: ENST00000498540.2

TRAF4-212, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 748 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-212ENST00000498540 TM2D3Q9BRN9 247 aa11.38□□□□□ -0.59
TRAF4-212ENST00000498540 ST3GAL6Q9Y274 331 aa11.38□□□□□ -0.59
TRAF4-212ENST00000498540 ATP6V0E1O15342 81 aa11.37□□□□□ -0.59
TRAF4-212ENST00000498540 TXNL1O43396 289 aa11.37□□□□□ -0.59
TRAF4-212ENST00000498540 OR7C1O76099 320 aaPredicted RBP11.37□□□□□ -0.59
TRAF4-212ENST00000498540 CDRT1O95170 752 aa11.37□□□□□ -0.59
TRAF4-212ENST00000498540 ZNF134P52741 427 aa11.37□□□□□ -0.59
TRAF4-212ENST00000498540 ZNF137PP52743 207 aa11.37□□□□□ -0.59
TRAF4-212ENST00000498540 RBM11P57052 281 aaKnown RBP11.37□□□□□ -0.59
TRAF4-212ENST00000498540 MMDQ15546 238 aa11.37□□□□□ -0.59
TRAF4-212ENST00000498540 ZNF529Q6P280 563 aa11.37□□□□□ -0.59
TRAF4-212ENST00000498540 ASCL4Q6XD76 172 aa11.37□□□□□ -0.59
TRAF4-212ENST00000498540 SLC25A48Q6ZT89 311 aaKnown RBP11.37□□□□□ -0.59
TRAF4-212ENST00000498540 ACBD7Q8N6N7 88 aa11.37□□□□□ -0.59
TRAF4-212ENST00000498540 TSEN15Q8WW01 171 aaKnown RBP11.37□□□□□ -0.59
TRAF4-212ENST00000498540 SLC7A6OSQ96CW6 309 aaPredicted RBP11.37□□□□□ -0.59
TRAF4-212ENST00000498540 PDCD1LG2Q9BQ51 273 aa11.37□□□□□ -0.59
TRAF4-212ENST00000498540 IFT22Q9H7X7 185 aa11.37□□□□□ -0.59
TRAF4-212ENST00000498540 ISG20L2Q9H9L3 353 aaKnown RBP11.37□□□□□ -0.59
TRAF4-212ENST00000498540 EDA2RQ9HAV5 297 aa11.37□□□□□ -0.59
TRAF4-212ENST00000498540 DHDHQ9UQ10 334 aa11.37□□□□□ -0.59
TRAF4-212ENST00000498540 E9PI62 339 aa11.36□□□□□ -0.59
TRAF4-212ENST00000498540 GEMIN2O14893 280 aaKnown RBP11.36□□□□□ -0.59
TRAF4-212ENST00000498540 ORC5O43913 435 aa11.36□□□□□ -0.59
TRAF4-212ENST00000498540 RAB3AP20336 220 aa11.36□□□□□ -0.59
TRAF4-212ENST00000498540 FASP25445 335 aa11.36□□□□□ -0.59
TRAF4-212ENST00000498540 RAB9AP51151 201 aa11.36□□□□□ -0.59
TRAF4-212ENST00000498540 LSAMPQ13449 338 aa11.36□□□□□ -0.59
TRAF4-212ENST00000498540 SRSF7Q16629 238 aaKnown RBP eCLIP11.36□□□□□ -0.59
TRAF4-212ENST00000498540 ARPC1AQ92747 370 aa11.36□□□□□ -0.59
TRAF4-212ENST00000498540 ISOC1Q96CN7 298 aa11.36□□□□□ -0.59
TRAF4-212ENST00000498540 CPNE2Q96FN4 548 aaPredicted RBP11.36□□□□□ -0.59
TRAF4-212ENST00000498540 CHCHD6Q9BRQ6 235 aa11.36□□□□□ -0.59
TRAF4-212ENST00000498540 PARP11Q9NR21 331 aa11.36□□□□□ -0.59
TRAF4-212ENST00000498540 IMPAD1Q9NX62 359 aa11.36□□□□□ -0.59
TRAF4-212ENST00000498540 TRAV41A0A0B4J266 112 aa11.35□□□□□ -0.59
TRAF4-212ENST00000498540 FAM90A10PA6NDY2 464 aa11.35□□□□□ -0.59
TRAF4-212ENST00000498540 TMEM212A6NML5 194 aa11.35□□□□□ -0.59
TRAF4-212ENST00000498540 MAGEB3O15480 346 aa11.35□□□□□ -0.59
TRAF4-212ENST00000498540 CNTFRP26992 372 aa11.35□□□□□ -0.59
TRAF4-212ENST00000498540 Q3ZCU0 254 aa11.35□□□□□ -0.59
TRAF4-212ENST00000498540 CT45A1Q5HYN5 189 aa11.35□□□□□ -0.59
TRAF4-212ENST00000498540 NHLRC3Q5JS37 347 aa11.35□□□□□ -0.59
TRAF4-212ENST00000498540 ACSM6Q6P461 480 aa11.35□□□□□ -0.59
TRAF4-212ENST00000498540 ZNF497Q6ZNH5 498 aa11.35□□□□□ -0.59
TRAF4-212ENST00000498540 LHFPL3Q86UP9 236 aa11.35□□□□□ -0.59
TRAF4-212ENST00000498540 OR10V1Q8NGI7 309 aa11.35□□□□□ -0.59
TRAF4-212ENST00000498540 OR52N1Q8NH53 320 aa11.35□□□□□ -0.59
TRAF4-212ENST00000498540 OR5AK2Q8NH90 309 aa11.35□□□□□ -0.59
TRAF4-212ENST00000498540 CT45A3Q8NHU0 189 aa11.35□□□□□ -0.59
TRAF4-212ENST00000498540 LGALS12Q96DT0 336 aa11.35□□□□□ -0.59
TRAF4-212ENST00000498540 RITA1Q96K30 269 aa11.35□□□□□ -0.59
TRAF4-212ENST00000498540 ALG8Q9BVK2 526 aa11.35□□□□□ -0.59
TRAF4-212ENST00000498540 OR51J1Q9H342 316 aa11.35□□□□□ -0.59
TRAF4-212ENST00000498540 TAS2R4Q9NYW5 299 aa11.35□□□□□ -0.59
TRAF4-212ENST00000498540 OAZ3Q9UMX2 235 aa11.35□□□□□ -0.59
TRAF4-212ENST00000498540 IGHV7-81A0A0B4J1V7 117 aa11.34□□□□□ -0.59
TRAF4-212ENST00000498540 MAGEA13PA6NCF6 341 aa11.34□□□□□ -0.59
TRAF4-212ENST00000498540 C12orf77C9JDV5 145 aa11.34□□□□□ -0.59
TRAF4-212ENST00000498540 AIPO00170 330 aa11.34□□□□□ -0.59
TRAF4-212ENST00000498540 HLA-DRB1P01911 266 aa11.34□□□□□ -0.59
TRAF4-212ENST00000498540 MT-ND4P03905 459 aa11.34□□□□□ -0.59
TRAF4-212ENST00000498540 SERPINA2P20848 420 aa11.34□□□□□ -0.59
TRAF4-212ENST00000498540 BLVRBP30043 206 aaPredicted RBP11.34□□□□□ -0.59
TRAF4-212ENST00000498540 SOX2P48431 317 aa11.34□□□□□ -0.59
TRAF4-212ENST00000498540 GALEQ14376 348 aa11.34□□□□□ -0.59
TRAF4-212ENST00000498540 ATAD3CQ5T2N8 411 aa11.34□□□□□ -0.59
TRAF4-212ENST00000498540 HAPLN4Q86UW8 402 aa11.34□□□□□ -0.59
TRAF4-212ENST00000498540 OR6Q1Q8NGQ2 317 aa11.34□□□□□ -0.59
TRAF4-212ENST00000498540 NEK7Q8TDX7 302 aa11.34□□□□□ -0.59
TRAF4-212ENST00000498540 CASTOR1Q8WTX7 329 aa11.34□□□□□ -0.59
TRAF4-212ENST00000498540 RGP1Q92546 391 aaPredicted RBP11.34□□□□□ -0.59
TRAF4-212ENST00000498540 IL36GQ9NZH8 169 aa11.34□□□□□ -0.59
TRAF4-212ENST00000498540 GNG12Q9UBI6 72 aa11.34□□□□□ -0.59
TRAF4-212ENST00000498540 AASSQ9UDR5 926 aa11.34□□□□□ -0.59
TRAF4-212ENST00000498540 ING4Q9UNL4 249 aa11.34□□□□□ -0.59
TRAF4-212ENST00000498540 EXOGQ9Y2C4 368 aaKnown RBP11.34□□□□□ -0.59
TRAF4-212ENST00000498540 IGHV4OR15-8A0A075B7B6 117 aa11.33□□□□□ -0.6
TRAF4-212ENST00000498540 A0A087WW49 117 aa11.33□□□□□ -0.6
TRAF4-212ENST00000498540 A0A1W2PP11 408 aa11.33□□□□□ -0.6
TRAF4-212ENST00000498540 LINC01619G3V211 115 aa11.33□□□□□ -0.6
TRAF4-212ENST00000498540 LDLRAD4O15165 306 aa11.33□□□□□ -0.6
TRAF4-212ENST00000498540 LANCL1O43813 399 aa11.33□□□□□ -0.6
TRAF4-212ENST00000498540 SOX15O60248 233 aa11.33□□□□□ -0.6
TRAF4-212ENST00000498540 IGHV4-30-4P0DP06 118 aa11.33□□□□□ -0.6
TRAF4-212ENST00000498540 ACTBP60709 375 aa11.33□□□□□ -0.6
TRAF4-212ENST00000498540 NDPQ00604 133 aa11.33□□□□□ -0.6
TRAF4-212ENST00000498540 SLC25A30Q5SVS4 291 aa11.33□□□□□ -0.6
TRAF4-212ENST00000498540 LINC00596Q86U02 117 aa11.33□□□□□ -0.6
TRAF4-212ENST00000498540 SYS1Q8N2H4 156 aa11.33□□□□□ -0.6
TRAF4-212ENST00000498540 PRR18Q8N4B5 295 aa11.33□□□□□ -0.6
TRAF4-212ENST00000498540 MINDY2Q8NBR6 621 aa11.33□□□□□ -0.6
TRAF4-212ENST00000498540 OR1L1Q8NH94 360 aa11.33□□□□□ -0.6
TRAF4-212ENST00000498540 TRUB1Q8WWH5 349 aaKnown RBP11.33□□□□□ -0.6
TRAF4-212ENST00000498540 JAM3Q9BX67 310 aa11.33□□□□□ -0.6
TRAF4-212ENST00000498540 ANKRD60Q9BZ19 345 aa11.33□□□□□ -0.6
TRAF4-212ENST00000498540 TOLLIPQ9H0E2 274 aa11.33□□□□□ -0.6
TRAF4-212ENST00000498540 METTL9Q9H1A3 318 aa11.33□□□□□ -0.6
TRAF4-212ENST00000498540 TPSG1Q9NRR2 321 aa11.33□□□□□ -0.6
TRAF4-212ENST00000498540 FBXO7Q9Y3I1 522 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms