RNA–Protein interactions for RNA: ENST00000497251.1

TRAPPC3-207, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 715 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-207ENST00000497251 GPR176Q14439 515 aa13.24□□□□□ -0.29
TRAPPC3-207ENST00000497251 OR2G6Q5TZ20 316 aa13.24□□□□□ -0.29
TRAPPC3-207ENST00000497251 SATL1Q86VE3 508 aa13.24□□□□□ -0.29
TRAPPC3-207ENST00000497251 SUMF2Q8NBJ7 301 aa13.24□□□□□ -0.29
TRAPPC3-207ENST00000497251 PLPPR1Q8TBJ4 325 aa13.24□□□□□ -0.29
TRAPPC3-207ENST00000497251 TFAP2CQ92754 450 aa13.24□□□□□ -0.29
TRAPPC3-207ENST00000497251 GGHQ92820 318 aa13.24□□□□□ -0.29
TRAPPC3-207ENST00000497251 LEAP2Q969E1 77 aa13.24□□□□□ -0.29
TRAPPC3-207ENST00000497251 SMIM19Q96E16 107 aa13.24□□□□□ -0.29
TRAPPC3-207ENST00000497251 RAX2Q96IS3 184 aa13.24□□□□□ -0.29
TRAPPC3-207ENST00000497251 S100A13Q99584 98 aa13.24□□□□□ -0.29
TRAPPC3-207ENST00000497251 RASL11BQ9BPW5 248 aa13.24□□□□□ -0.29
TRAPPC3-207ENST00000497251 LSM4Q9Y4Z0 139 aaKnown RBP13.24□□□□□ -0.29
TRAPPC3-207ENST00000497251 OGG1O15527 345 aa13.23□□□□□ -0.29
TRAPPC3-207ENST00000497251 OR7C1O76099 320 aaPredicted RBP13.23□□□□□ -0.29
TRAPPC3-207ENST00000497251 HTR3BO95264 441 aa13.23□□□□□ -0.29
TRAPPC3-207ENST00000497251 IGHG4P01861 327 aa13.23□□□□□ -0.29
TRAPPC3-207ENST00000497251 ZNF137PP52743 207 aa13.23□□□□□ -0.29
TRAPPC3-207ENST00000497251 RBM11P57052 281 aaKnown RBP13.23□□□□□ -0.29
TRAPPC3-207ENST00000497251 PPP3R1P63098 170 aa13.23□□□□□ -0.29
TRAPPC3-207ENST00000497251 ST3GAL4Q11206 333 aa13.23□□□□□ -0.29
TRAPPC3-207ENST00000497251 DIAPH2-AS1Q14236 149 aa13.23□□□□□ -0.29
TRAPPC3-207ENST00000497251 LTC4SQ16873 150 aa13.23□□□□□ -0.29
TRAPPC3-207ENST00000497251 PIGYQ3MUY2 71 aa13.23□□□□□ -0.29
TRAPPC3-207ENST00000497251 XAF1Q6GPH4 301 aa13.23□□□□□ -0.29
TRAPPC3-207ENST00000497251 STX19Q8N4C7 294 aa13.23□□□□□ -0.29
TRAPPC3-207ENST00000497251 Q8N9W7 124 aa13.23□□□□□ -0.29
TRAPPC3-207ENST00000497251 TMEM104Q8NE00 496 aa13.23□□□□□ -0.29
TRAPPC3-207ENST00000497251 RGP1Q92546 391 aaPredicted RBP13.23□□□□□ -0.29
TRAPPC3-207ENST00000497251 ARL11Q969Q4 196 aa13.23□□□□□ -0.29
TRAPPC3-207ENST00000497251 ST6GALNAC6Q969X2 333 aa13.23□□□□□ -0.29
TRAPPC3-207ENST00000497251 MRPS24Q96EL2 167 aaKnown RBP13.23□□□□□ -0.29
TRAPPC3-207ENST00000497251 FAM192AQ9GZU8 254 aa13.23□□□□□ -0.29
TRAPPC3-207ENST00000497251 GFOD1Q9NXC2 390 aa13.23□□□□□ -0.29
TRAPPC3-207ENST00000497251 NKX1-2Q9UD57 310 aaPredicted RBP13.23□□□□□ -0.29
TRAPPC3-207ENST00000497251 PSORS1C1Q9UIG5 152 aa13.23□□□□□ -0.29
TRAPPC3-207ENST00000497251 C3orf84H3BNL1 204 aa13.22□□□□□ -0.29
TRAPPC3-207ENST00000497251 C15orf65H3BRN8 121 aa13.22□□□□□ -0.29
TRAPPC3-207ENST00000497251 SDCBPO00560 298 aaPredicted RBP13.22□□□□□ -0.29
TRAPPC3-207ENST00000497251 IGHV3-7P01780 117 aa13.22□□□□□ -0.29
TRAPPC3-207ENST00000497251 IGF1P05019 195 aa13.22□□□□□ -0.29
TRAPPC3-207ENST00000497251 LAIR2Q6ISS4 152 aa13.22□□□□□ -0.29
TRAPPC3-207ENST00000497251 TRAT1Q6PIZ9 186 aa13.22□□□□□ -0.29
TRAPPC3-207ENST00000497251 C18orf65Q6ZTR6 163 aa13.22□□□□□ -0.29
TRAPPC3-207ENST00000497251 ZNF485Q8NCK3 441 aa13.22□□□□□ -0.29
TRAPPC3-207ENST00000497251 C4orf3Q8WVX3 66 aa13.22□□□□□ -0.29
TRAPPC3-207ENST00000497251 RTN4IP1Q8WWV3 396 aaPredicted RBP13.22□□□□□ -0.29
TRAPPC3-207ENST00000497251 S1PR3Q99500 378 aa13.22□□□□□ -0.29
TRAPPC3-207ENST00000497251 PLSCR3Q9NRY6 295 aa13.22□□□□□ -0.29
TRAPPC3-207ENST00000497251 CLEC2DQ9UHP7 191 aa13.22□□□□□ -0.29
TRAPPC3-207ENST00000497251 LINC00527Q9UJ94 153 aa13.22□□□□□ -0.29
TRAPPC3-207ENST00000497251 CA11O75493 328 aa13.21□□□□□ -0.29
TRAPPC3-207ENST00000497251 RPLP1P05386 114 aaKnown RBP13.21□□□□□ -0.29
TRAPPC3-207ENST00000497251 GTF2F2P13984 249 aa13.21□□□□□ -0.29
TRAPPC3-207ENST00000497251 VDAC1P21796 283 aa13.21□□□□□ -0.29
TRAPPC3-207ENST00000497251 SOX6P35712 828 aa13.21□□□□□ -0.29
TRAPPC3-207ENST00000497251 ZNF93P35789 620 aaPredicted RBP13.21□□□□□ -0.29
TRAPPC3-207ENST00000497251 TAS2R43P59537 309 aa13.21□□□□□ -0.29
TRAPPC3-207ENST00000497251 DMKNQ6E0U4 476 aaPredicted RBP13.21□□□□□ -0.29
TRAPPC3-207ENST00000497251 LCNL1Q6ZST4 164 aa13.21□□□□□ -0.29
TRAPPC3-207ENST00000497251 OR51A2Q8NGJ7 313 aa13.21□□□□□ -0.29
TRAPPC3-207ENST00000497251 TMEM106AQ96A25 262 aa13.21□□□□□ -0.29
TRAPPC3-207ENST00000497251 ING4Q9UNL4 249 aa13.21□□□□□ -0.29
TRAPPC3-207ENST00000497251 SPINT2O43291 252 aa13.2□□□□□ -0.3
TRAPPC3-207ENST00000497251 LALBAP00709 142 aa13.2□□□□□ -0.3
TRAPPC3-207ENST00000497251 MT-ND4P03905 459 aa13.2□□□□□ -0.3
TRAPPC3-207ENST00000497251 CHATP28329 748 aa13.2□□□□□ -0.3
TRAPPC3-207ENST00000497251 SOX2P48431 317 aa13.2□□□□□ -0.3
TRAPPC3-207ENST00000497251 RAB25P57735 213 aa13.2□□□□□ -0.3
TRAPPC3-207ENST00000497251 CFHR3Q02985 330 aa13.2□□□□□ -0.3
TRAPPC3-207ENST00000497251 FHL3Q13643 280 aa13.2□□□□□ -0.3
TRAPPC3-207ENST00000497251 YIF1BQ5BJH7 314 aa13.2□□□□□ -0.3
TRAPPC3-207ENST00000497251 C6orf183Q5T699 404 aa13.2□□□□□ -0.3
TRAPPC3-207ENST00000497251 ZNF497Q6ZNH5 498 aa13.2□□□□□ -0.3
TRAPPC3-207ENST00000497251 SLC25A48Q6ZT89 311 aaKnown RBP13.2□□□□□ -0.3
TRAPPC3-207ENST00000497251 AHSA2Q719I0 299 aa13.2□□□□□ -0.3
TRAPPC3-207ENST00000497251 ZNF554Q86TJ5 538 aa13.2□□□□□ -0.3
TRAPPC3-207ENST00000497251 FAM71E2Q8N5Q1 922 aa13.2□□□□□ -0.3
TRAPPC3-207ENST00000497251 BPIFB6Q8NFQ5 453 aa13.2□□□□□ -0.3
TRAPPC3-207ENST00000497251 OR10K1Q8NGX5 313 aa13.2□□□□□ -0.3
TRAPPC3-207ENST00000497251 NRG4Q8WWG1 115 aa13.2□□□□□ -0.3
TRAPPC3-207ENST00000497251 FKBP14Q9NWM8 211 aa13.2□□□□□ -0.3
TRAPPC3-207ENST00000497251 LINC01548A6NM66 108 aa13.19□□□□□ -0.3
TRAPPC3-207ENST00000497251 SEC14L6B5MCN3 397 aa13.19□□□□□ -0.3
TRAPPC3-207ENST00000497251 MYL12BO14950 172 aa13.19□□□□□ -0.3
TRAPPC3-207ENST00000497251 GPX5O75715 221 aa13.19□□□□□ -0.3
TRAPPC3-207ENST00000497251 CDRT1O95170 752 aa13.19□□□□□ -0.3
TRAPPC3-207ENST00000497251 GLAP06280 429 aa13.19□□□□□ -0.3
TRAPPC3-207ENST00000497251 PSMB8P28062 276 aa13.19□□□□□ -0.3
TRAPPC3-207ENST00000497251 BDKRB2P30411 391 aa13.19□□□□□ -0.3
TRAPPC3-207ENST00000497251 RUNX1Q01196 453 aa13.19□□□□□ -0.3
TRAPPC3-207ENST00000497251 DDI2Q5TDH0 399 aa13.19□□□□□ -0.3
TRAPPC3-207ENST00000497251 CDH26Q8IXH8 852 aa13.19□□□□□ -0.3
TRAPPC3-207ENST00000497251 GHSRQ92847 366 aa13.19□□□□□ -0.3
TRAPPC3-207ENST00000497251 UBE2E2Q96LR5 201 aa13.19□□□□□ -0.3
TRAPPC3-207ENST00000497251 VCX3BQ9H321 246 aa13.19□□□□□ -0.3
TRAPPC3-207ENST00000497251 TAS2R4Q9NYW5 299 aa13.19□□□□□ -0.3
TRAPPC3-207ENST00000497251 CKLFQ9UBR5 152 aa13.19□□□□□ -0.3
TRAPPC3-207ENST00000497251 IGHV3-72A0A0B4J1Y9 119 aa13.18□□□□□ -0.3
TRAPPC3-207ENST00000497251 TRBV5-5A0A0J9YX44 114 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms