RNA–Protein interactions for RNA: ENST00000496826.1

USF3-204, Transcript of upstream transcription factor family member 3, humanhuman

TSL 1 (best)

Gene USF3, Length 8,397 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-204ENST00000496826 JAM2P57087 298 aa5.16□□□□□ -1.58
USF3-204ENST00000496826 TIAL1Q01085 375 aaKnown RBP eCLIP5.16□□□□□ -1.58
USF3-204ENST00000496826 PIP5KL1Q5T9C9 394 aa5.16□□□□□ -1.58
USF3-204ENST00000496826 MYO7BQ6PIF6 2116 aa5.16□□□□□ -1.58
USF3-204ENST00000496826 DRAM1Q8N682 238 aa5.16□□□□□ -1.58
USF3-204ENST00000496826 ALG14Q96F25 216 aa5.16□□□□□ -1.58
USF3-204ENST00000496826 SMIM2Q9BVW6 85 aa5.16□□□□□ -1.58
USF3-204ENST00000496826 A0A087WX48 190 aa5.16□□□□□ -1.58
USF3-204ENST00000496826 C1QTNF9P0C862 333 aa5.16□□□□□ -1.58
USF3-204ENST00000496826 GLIPR1L1Q6UWM5 242 aa5.16□□□□□ -1.58
USF3-204ENST00000496826 OSR2Q8N2R0 312 aa5.16□□□□□ -1.58
USF3-204ENST00000496826 FBLIM1Q8WUP2 373 aa5.16□□□□□ -1.58
USF3-204ENST00000496826 RNF166Q96A37 237 aaPredicted RBP5.16□□□□□ -1.58
USF3-204ENST00000496826 MARS2Q96GW9 593 aaKnown RBP5.16□□□□□ -1.58
USF3-204ENST00000496826 SLC26A1Q9H2B4 701 aa5.16□□□□□ -1.58
USF3-204ENST00000496826 MRC2Q9UBG0 1479 aa5.16□□□□□ -1.58
USF3-204ENST00000496826 TRAV34A0A0B4J273 112 aa5.16□□□□□ -1.58
USF3-204ENST00000496826 TRBV5-4A0A0C4DH59 114 aa5.16□□□□□ -1.58
USF3-204ENST00000496826 GATA2P23769 480 aaPredicted RBP5.16□□□□□ -1.58
USF3-204ENST00000496826 CXCL17Q6UXB2 119 aa5.16□□□□□ -1.58
USF3-204ENST00000496826 NIT1Q86X76 327 aa5.16□□□□□ -1.58
USF3-204ENST00000496826 TP53INP2Q8IXH6 220 aa5.16□□□□□ -1.58
USF3-204ENST00000496826 NPY6RQ99463 290 aa5.16□□□□□ -1.58
USF3-204ENST00000496826 SDHCQ99643 169 aaPredicted RBP5.16□□□□□ -1.58
USF3-204ENST00000496826 ASCL3Q9NQ33 180 aa5.16□□□□□ -1.58
USF3-204ENST00000496826 RCE1Q9Y256 329 aa5.16□□□□□ -1.58
USF3-204ENST00000496826 SMIM28A0A1B0GU29 152 aa5.16□□□□□ -1.58
USF3-204ENST00000496826 TLCD2A6NGC4 264 aa5.16□□□□□ -1.58
USF3-204ENST00000496826 GNG10P50151 68 aa5.16□□□□□ -1.58
USF3-204ENST00000496826 RTP5Q14D33 572 aa5.16□□□□□ -1.58
USF3-204ENST00000496826 CST6Q15828 149 aa5.16□□□□□ -1.58
USF3-204ENST00000496826 PLK5Q496M5 336 aa5.16□□□□□ -1.58
USF3-204ENST00000496826 MESTQ5EB52 335 aa5.16□□□□□ -1.58
USF3-204ENST00000496826 OR10D4PQ8NGN7 298 aa5.16□□□□□ -1.58
USF3-204ENST00000496826 GATAD1Q8WUU5 269 aa5.16□□□□□ -1.58
USF3-204ENST00000496826 MVB12AQ96EY5 273 aa5.16□□□□□ -1.58
USF3-204ENST00000496826 TRGV11A0A075B6L2 103 aa5.15□□□□□ -1.58
USF3-204ENST00000496826 TRGV2A0A075B6R0 118 aa5.15□□□□□ -1.58
USF3-204ENST00000496826 TRAV1-2A0A0B4J238 106 aa5.15□□□□□ -1.58
USF3-204ENST00000496826 TRBV5-5A0A0J9YX44 114 aa5.15□□□□□ -1.58
USF3-204ENST00000496826 SELENOWP63302 87 aa5.15□□□□□ -1.58
USF3-204ENST00000496826 C8orf31Q8N9H6 132 aa5.15□□□□□ -1.58
USF3-204ENST00000496826 OR10G9Q8NGN4 311 aa5.15□□□□□ -1.58
USF3-204ENST00000496826 ZNF414Q96IQ9 312 aa5.15□□□□□ -1.58
USF3-204ENST00000496826 AUNIPQ9H7T9 357 aa5.15□□□□□ -1.58
USF3-204ENST00000496826 GPR84Q9NQS5 396 aa5.15□□□□□ -1.58
USF3-204ENST00000496826 SMPXQ9UHP9 88 aa5.15□□□□□ -1.58
USF3-204ENST00000496826 NESP48681 1621 aa5.15□□□□□ -1.58
USF3-204ENST00000496826 TRIOBPQ9H2D6 2365 aa5.15□□□□□ -1.58
USF3-204ENST00000496826 LYRM9A8MSI8 78 aa5.15□□□□□ -1.58
USF3-204ENST00000496826 LIFP15018 202 aa5.15□□□□□ -1.58
USF3-204ENST00000496826 GPX2P18283 190 aa5.15□□□□□ -1.58
USF3-204ENST00000496826 PPIAP62937 165 aaKnown RBP5.15□□□□□ -1.58
USF3-204ENST00000496826 CX3CL1P78423 397 aa5.15□□□□□ -1.58
USF3-204ENST00000496826 FCRLBQ6BAA4 426 aa5.15□□□□□ -1.58
USF3-204ENST00000496826 C15orf39Q6ZRI6 1047 aa5.15□□□□□ -1.58
USF3-204ENST00000496826 MUS81Q96NY9 551 aa5.15□□□□□ -1.58
USF3-204ENST00000496826 SMOC2Q9H3U7 446 aa5.15□□□□□ -1.58
USF3-204ENST00000496826 SOD1P00441 154 aa5.15□□□□□ -1.58
USF3-204ENST00000496826 FUSP35637 526 aaKnown RBP eCLIP5.15□□□□□ -1.58
USF3-204ENST00000496826 CA7P43166 264 aa5.15□□□□□ -1.58
USF3-204ENST00000496826 ATP5G2Q06055 141 aa5.15□□□□□ -1.58
USF3-204ENST00000496826 ZNF2Q9BSG1 426 aaPredicted RBP5.15□□□□□ -1.58
USF3-204ENST00000496826 GATA5Q9BWX5 397 aaPredicted RBP5.15□□□□□ -1.58
USF3-204ENST00000496826 RNF122Q9H9V4 155 aa5.15□□□□□ -1.58
USF3-204ENST00000496826 PLAC1Q9HBJ0 212 aa5.15□□□□□ -1.58
USF3-204ENST00000496826 PTPRUQ92729 1446 aa5.15□□□□□ -1.58
USF3-204ENST00000496826 LRRIQ1Q96JM4 1722 aa5.15□□□□□ -1.58
USF3-204ENST00000496826 C9JVG2 144 aa5.15□□□□□ -1.58
USF3-204ENST00000496826 UBE2Q2LH0YL09 131 aa5.15□□□□□ -1.58
USF3-204ENST00000496826 DUSP2Q05923 314 aa5.15□□□□□ -1.58
USF3-204ENST00000496826 C5orf47Q569G3 176 aa5.15□□□□□ -1.58
USF3-204ENST00000496826 CASC2Q6XLA1 102 aa5.15□□□□□ -1.58
USF3-204ENST00000496826 ZNF775Q96BV0 537 aaPredicted RBP5.15□□□□□ -1.58
USF3-204ENST00000496826 PLEKHB2Q96CS7 222 aa5.15□□□□□ -1.58
USF3-204ENST00000496826 WBP1LQ9NX94 342 aa5.15□□□□□ -1.58
USF3-204ENST00000496826 IFITM5A6NNB3 132 aa5.15□□□□□ -1.59
USF3-204ENST00000496826 LOC730098B7Z3J9 87 aa5.15□□□□□ -1.59
USF3-204ENST00000496826 ZNF124Q15973 351 aa5.15□□□□□ -1.59
USF3-204ENST00000496826 TNXAQ16473 311 aa5.15□□□□□ -1.59
USF3-204ENST00000496826 TEX45Q8NA69 505 aa5.15□□□□□ -1.59
USF3-204ENST00000496826 RDH5Q92781 318 aa5.15□□□□□ -1.59
USF3-204ENST00000496826 ABHD14BQ96IU4 210 aa5.15□□□□□ -1.59
USF3-204ENST00000496826 GKN1Q9NS71 199 aa5.15□□□□□ -1.59
USF3-204ENST00000496826 C9JQL5 133 aa5.15□□□□□ -1.59
USF3-204ENST00000496826 PEX7O00628 323 aa5.15□□□□□ -1.59
USF3-204ENST00000496826 ADMP35318 185 aa5.15□□□□□ -1.59
USF3-204ENST00000496826 PSG6Q00889 435 aa5.15□□□□□ -1.59
USF3-204ENST00000496826 ALKAL2Q6UX46 152 aa5.15□□□□□ -1.59
USF3-204ENST00000496826 OTOSQ8NHW6 89 aa5.15□□□□□ -1.59
USF3-204ENST00000496826 RLN3Q8WXF3 142 aa5.15□□□□□ -1.59
USF3-204ENST00000496826 C11orf94C9JXX5 98 aa5.15□□□□□ -1.59
USF3-204ENST00000496826 TCF21O43680 179 aa5.15□□□□□ -1.59
USF3-204ENST00000496826 SYT14P1Q58G82 188 aa5.15□□□□□ -1.59
USF3-204ENST00000496826 BCORP1Q8N888 145 aa5.15□□□□□ -1.59
USF3-204ENST00000496826 OR4D5Q8NGN0 318 aa5.15□□□□□ -1.59
USF3-204ENST00000496826 KLK6Q92876 244 aa5.15□□□□□ -1.59
USF3-204ENST00000496826 SLX4Q8IY92 1834 aa5.15□□□□□ -1.59
USF3-204ENST00000496826 SAMD9LQ8IVG5 1584 aa5.15□□□□□ -1.59
USF3-204ENST00000496826 PITX3O75364 302 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms