RNA–Protein interactions for RNA: ENST00000495010.5

VARS-228, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 1,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-228ENST00000495010 SPINT2O43291 252 aa11.06□□□□□ -0.64
VARS-228ENST00000495010 ORC5O43913 435 aa11.06□□□□□ -0.64
VARS-228ENST00000495010 RAB9AP51151 201 aa11.06□□□□□ -0.64
VARS-228ENST00000495010 SRSF7Q16629 238 aaKnown RBP eCLIP11.06□□□□□ -0.64
VARS-228ENST00000495010 Q3ZCU0 254 aa11.06□□□□□ -0.64
VARS-228ENST00000495010 ASPHD1Q5U4P2 390 aa11.06□□□□□ -0.64
VARS-228ENST00000495010 FAM53AQ6NSI3 398 aaPredicted RBP11.06□□□□□ -0.64
VARS-228ENST00000495010 SLC25A48Q6ZT89 311 aaKnown RBP11.06□□□□□ -0.64
VARS-228ENST00000495010 AMIGO2Q86SJ2 522 aa11.06□□□□□ -0.64
VARS-228ENST00000495010 OR5AK2Q8NH90 309 aa11.06□□□□□ -0.64
VARS-228ENST00000495010 TRUB1Q8WWH5 349 aaKnown RBP11.06□□□□□ -0.64
VARS-228ENST00000495010 GABARAPL3Q9BY60 117 aa11.06□□□□□ -0.64
VARS-228ENST00000495010 METTL9Q9H1A3 318 aa11.06□□□□□ -0.64
VARS-228ENST00000495010 PARP11Q9NR21 331 aa11.06□□□□□ -0.64
VARS-228ENST00000495010 ERGIC3Q9Y282 383 aa11.06□□□□□ -0.64
VARS-228ENST00000495010 SORL1Q92673 2214 aa11.06□□□□□ -0.64
VARS-228ENST00000495010 TRAV41A0A0B4J266 112 aa11.05□□□□□ -0.64
VARS-228ENST00000495010 TRIM64CA6NLI5 447 aa11.05□□□□□ -0.64
VARS-228ENST00000495010 LINC01619G3V211 115 aa11.05□□□□□ -0.64
VARS-228ENST00000495010 G3V318 75 aa11.05□□□□□ -0.64
VARS-228ENST00000495010 AIPO00170 330 aa11.05□□□□□ -0.64
VARS-228ENST00000495010 PPIFP30405 207 aaKnown RBP11.05□□□□□ -0.64
VARS-228ENST00000495010 KIAA0141Q14154 515 aaPredicted RBP11.05□□□□□ -0.64
VARS-228ENST00000495010 GALEQ14376 348 aa11.05□□□□□ -0.64
VARS-228ENST00000495010 LINC00596Q86U02 117 aa11.05□□□□□ -0.64
VARS-228ENST00000495010 OR52N1Q8NH53 320 aa11.05□□□□□ -0.64
VARS-228ENST00000495010 DLX4Q92988 240 aaPredicted RBP11.05□□□□□ -0.64
VARS-228ENST00000495010 OR4C12Q96R67 309 aa11.05□□□□□ -0.64
VARS-228ENST00000495010 ZNF251Q9BRH9 671 aa11.05□□□□□ -0.64
VARS-228ENST00000495010 ALG8Q9BVK2 526 aa11.05□□□□□ -0.64
VARS-228ENST00000495010 IFT22Q9H7X7 185 aa11.05□□□□□ -0.64
VARS-228ENST00000495010 TRAPPC2LQ9UL33 140 aa11.05□□□□□ -0.64
VARS-228ENST00000495010 AP4S1Q9Y587 144 aa11.05□□□□□ -0.64
VARS-228ENST00000495010 J3QRE1 110 aa11.04□□□□□ -0.64
VARS-228ENST00000495010 GEMIN2O14893 280 aaKnown RBP11.04□□□□□ -0.64
VARS-228ENST00000495010 ATP6V0E1O15342 81 aa11.04□□□□□ -0.64
VARS-228ENST00000495010 SLC31A2O15432 143 aa11.04□□□□□ -0.64
VARS-228ENST00000495010 CDRT1O95170 752 aa11.04□□□□□ -0.64
VARS-228ENST00000495010 IGLV1-40P01703 118 aa11.04□□□□□ -0.64
VARS-228ENST00000495010 OR8U9P0C7N5 309 aa11.04□□□□□ -0.64
VARS-228ENST00000495010 SERPINA2P20848 420 aa11.04□□□□□ -0.64
VARS-228ENST00000495010 SLURP1P55000 103 aa11.04□□□□□ -0.64
VARS-228ENST00000495010 RBM11P57052 281 aaKnown RBP11.04□□□□□ -0.64
VARS-228ENST00000495010 MRPL28Q13084 256 aaKnown RBP11.04□□□□□ -0.64
VARS-228ENST00000495010 TMEM30BQ3MIR4 351 aa11.04□□□□□ -0.64
VARS-228ENST00000495010 MEDAGQ5VYS4 303 aa11.04□□□□□ -0.64
VARS-228ENST00000495010 ASCL4Q6XD76 172 aa11.04□□□□□ -0.64
VARS-228ENST00000495010 ADAMTSL5Q6ZMM2 481 aa11.04□□□□□ -0.64
VARS-228ENST00000495010 LHFPL3Q86UP9 236 aa11.04□□□□□ -0.64
VARS-228ENST00000495010 PRR18Q8N4B5 295 aa11.04□□□□□ -0.64
VARS-228ENST00000495010 OR10V1Q8NGI7 309 aa11.04□□□□□ -0.64
VARS-228ENST00000495010 RBMXL1Q96E39 390 aaKnown RBP11.04□□□□□ -0.64
VARS-228ENST00000495010 PDCD1LG2Q9BQ51 273 aa11.04□□□□□ -0.64
VARS-228ENST00000495010 PAK1IP1Q9NWT1 392 aaPredicted RBP11.04□□□□□ -0.64
VARS-228ENST00000495010 ZNF581Q9P0T4 197 aa11.04□□□□□ -0.64
VARS-228ENST00000495010 MRPS28Q9Y2Q9 187 aaKnown RBP11.04□□□□□ -0.64
VARS-228ENST00000495010 DYNC2H1Q8NCM8 4307 aaKnown RBP11.03□□□□□ -0.64
VARS-228ENST00000495010 MT-ND4P03905 459 aa11.03□□□□□ -0.64
VARS-228ENST00000495010 CD2P06729 351 aa11.03□□□□□ -0.64
VARS-228ENST00000495010 FCGR1AP12314 374 aa11.03□□□□□ -0.64
VARS-228ENST00000495010 SOX2P48431 317 aa11.03□□□□□ -0.64
VARS-228ENST00000495010 ZNF137PP52743 207 aa11.03□□□□□ -0.64
VARS-228ENST00000495010 GBX2P52951 348 aaPredicted RBP11.03□□□□□ -0.64
VARS-228ENST00000495010 PITPNAQ00169 270 aa11.03□□□□□ -0.64
VARS-228ENST00000495010 LSAMPQ13449 338 aa11.03□□□□□ -0.64
VARS-228ENST00000495010 MPV17LQ2QL34 196 aa11.03□□□□□ -0.64
VARS-228ENST00000495010 NHLRC3Q5JS37 347 aa11.03□□□□□ -0.64
VARS-228ENST00000495010 C6orf183Q5T699 404 aa11.03□□□□□ -0.64
VARS-228ENST00000495010 ACSM6Q6P461 480 aa11.03□□□□□ -0.64
VARS-228ENST00000495010 SGPP2Q8IWX5 399 aa11.03□□□□□ -0.64
VARS-228ENST00000495010 SYS1Q8N2H4 156 aa11.03□□□□□ -0.64
VARS-228ENST00000495010 OR51A2Q8NGJ7 313 aa11.03□□□□□ -0.64
VARS-228ENST00000495010 ARPC1AQ92747 370 aa11.03□□□□□ -0.64
VARS-228ENST00000495010 TM2D3Q9BRN9 247 aa11.03□□□□□ -0.64
VARS-228ENST00000495010 ALX4Q9H161 411 aaPredicted RBP11.03□□□□□ -0.64
VARS-228ENST00000495010 TAS2R4Q9NYW5 299 aa11.03□□□□□ -0.64
VARS-228ENST00000495010 KIAA1456Q9P272 454 aa11.03□□□□□ -0.64
VARS-228ENST00000495010 EXOGQ9Y2C4 368 aaKnown RBP11.03□□□□□ -0.64
VARS-228ENST00000495010 ORC6Q9Y5N6 252 aa11.03□□□□□ -0.64
VARS-228ENST00000495010 LANCL1O43813 399 aa11.02□□□□□ -0.65
VARS-228ENST00000495010 ZNF780AO75290 641 aaPredicted RBP11.02□□□□□ -0.65
VARS-228ENST00000495010 HLA-DRB1P01911 266 aa11.02□□□□□ -0.65
VARS-228ENST00000495010 ZNF93P35789 620 aaPredicted RBP11.02□□□□□ -0.65
VARS-228ENST00000495010 ZNF134P52741 427 aa11.02□□□□□ -0.65
VARS-228ENST00000495010 ACTBP60709 375 aa11.02□□□□□ -0.65
VARS-228ENST00000495010 PPP3R1P63098 170 aa11.02□□□□□ -0.65
VARS-228ENST00000495010 ECSCRQ19T08 205 aa11.02□□□□□ -0.65
VARS-228ENST00000495010 CT45A1Q5HYN5 189 aa11.02□□□□□ -0.65
VARS-228ENST00000495010 SYT6Q5T7P8 510 aaPredicted RBP11.02□□□□□ -0.65
VARS-228ENST00000495010 LIN54Q6MZP7 749 aa11.02□□□□□ -0.65
VARS-228ENST00000495010 ZNF497Q6ZNH5 498 aa11.02□□□□□ -0.65
VARS-228ENST00000495010 ZNF439Q8NDP4 499 aa11.02□□□□□ -0.65
VARS-228ENST00000495010 CT45A3Q8NHU0 189 aa11.02□□□□□ -0.65
VARS-228ENST00000495010 ELOVL1Q9BW60 279 aa11.02□□□□□ -0.65
VARS-228ENST00000495010 JAM3Q9BX67 310 aa11.02□□□□□ -0.65
VARS-228ENST00000495010 ANKRD60Q9BZ19 345 aa11.02□□□□□ -0.65
VARS-228ENST00000495010 CST11Q9H112 138 aa11.02□□□□□ -0.65
VARS-228ENST00000495010 ISG20L2Q9H9L3 353 aaKnown RBP11.02□□□□□ -0.65
VARS-228ENST00000495010 IL36GQ9NZH8 169 aa11.02□□□□□ -0.65
VARS-228ENST00000495010 OAZ3Q9UMX2 235 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms