RNA–Protein interactions for RNA: ENST00000494854.5

SHISA5-216, Transcript of shisa family member 5, humanhuman

TSL 1 (best)

Gene SHISA5, Length 1,908 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA5-216ENST00000494854 DNAJB11Q9UBS4 358 aa13.15□□□□□ -0.3
SHISA5-216ENST00000494854 PCDHB10Q9UN67 800 aa13.15□□□□□ -0.3
SHISA5-216ENST00000494854 MSGN1A6NI15 193 aa13.15□□□□□ -0.3
SHISA5-216ENST00000494854 SH2D1BO14796 132 aa13.15□□□□□ -0.3
SHISA5-216ENST00000494854 RND3P61587 244 aa13.15□□□□□ -0.3
SHISA5-216ENST00000494854 NAAAQ02083 359 aa13.15□□□□□ -0.3
SHISA5-216ENST00000494854 AANATQ16613 207 aa13.15□□□□□ -0.3
SHISA5-216ENST00000494854 TOR2AQ5JU69 321 aa13.15□□□□□ -0.3
SHISA5-216ENST00000494854 FIP1L1Q6UN15 594 aaKnown RBP13.15□□□□□ -0.3
SHISA5-216ENST00000494854 Q6ZR03 302 aa13.15□□□□□ -0.3
SHISA5-216ENST00000494854 LYZL2Q7Z4W2 148 aa13.15□□□□□ -0.3
SHISA5-216ENST00000494854 C11orf53Q8IXP5 236 aa13.15□□□□□ -0.3
SHISA5-216ENST00000494854 RELL2Q8NC24 303 aaPredicted RBP13.15□□□□□ -0.3
SHISA5-216ENST00000494854 PHYHIPLQ96FC7 376 aa13.15□□□□□ -0.3
SHISA5-216ENST00000494854 AQP10Q96PS8 301 aa13.15□□□□□ -0.3
SHISA5-216ENST00000494854 TP53RKQ96S44 253 aa13.15□□□□□ -0.3
SHISA5-216ENST00000494854 SFXN3Q9BWM7 321 aa13.15□□□□□ -0.3
SHISA5-216ENST00000494854 SLC25A32Q9H2D1 315 aa13.15□□□□□ -0.3
SHISA5-216ENST00000494854 HES4Q9HCC6 221 aa13.15□□□□□ -0.3
SHISA5-216ENST00000494854 MED9Q9NWA0 146 aa13.15□□□□□ -0.3
SHISA5-216ENST00000494854 IGKV1D-13A0A0B4J2D9 117 aa13.14□□□□□ -0.31
SHISA5-216ENST00000494854 C3orf85A0A1B0GTC6 90 aa13.14□□□□□ -0.31
SHISA5-216ENST00000494854 hCG_1807616A0A1W2PRN6 198 aa13.14□□□□□ -0.31
SHISA5-216ENST00000494854 H7C1Q1 480 aa13.14□□□□□ -0.31
SHISA5-216ENST00000494854 GPR31O00270 319 aa13.14□□□□□ -0.31
SHISA5-216ENST00000494854 IGKV1-13P0DP09 117 aa13.14□□□□□ -0.31
SHISA5-216ENST00000494854 ZNF497Q6ZNH5 498 aa13.14□□□□□ -0.31
SHISA5-216ENST00000494854 ZNF818PQ6ZRF7 136 aa13.14□□□□□ -0.31
SHISA5-216ENST00000494854 LDLRAD3Q86YD5 345 aa13.14□□□□□ -0.31
SHISA5-216ENST00000494854 FOXRED2Q8IWF2 684 aa13.14□□□□□ -0.31
SHISA5-216ENST00000494854 PDZD9Q8IXQ8 264 aa13.14□□□□□ -0.31
SHISA5-216ENST00000494854 SPERTQ8NA61 448 aa13.14□□□□□ -0.31
SHISA5-216ENST00000494854 PLPPR1Q8TBJ4 325 aa13.14□□□□□ -0.31
SHISA5-216ENST00000494854 LRRC46Q96FV0 321 aa13.14□□□□□ -0.31
SHISA5-216ENST00000494854 CABLES2Q9BTV7 478 aa13.14□□□□□ -0.31
SHISA5-216ENST00000494854 SLC5A7Q9GZV3 580 aa13.14□□□□□ -0.31
SHISA5-216ENST00000494854 FBXO9Q9UK97 447 aaPredicted RBP13.14□□□□□ -0.31
SHISA5-216ENST00000494854 PDZD2O15018 2839 aa13.14□□□□□ -0.31
SHISA5-216ENST00000494854 CHD3Q12873 2000 aaKnown RBP13.14□□□□□ -0.31
SHISA5-216ENST00000494854 I3L521 148 aa13.13□□□□□ -0.31
SHISA5-216ENST00000494854 BMP5P22003 454 aa13.13□□□□□ -0.31
SHISA5-216ENST00000494854 ASCL1P50553 236 aa13.13□□□□□ -0.31
SHISA5-216ENST00000494854 ZNF83P51522 516 aa13.13□□□□□ -0.31
SHISA5-216ENST00000494854 ZNF826PQ6ZT77 177 aa13.13□□□□□ -0.31
SHISA5-216ENST00000494854 MOB1BQ7L9L4 216 aa13.13□□□□□ -0.31
SHISA5-216ENST00000494854 TBC1D26Q86UD7 250 aa13.13□□□□□ -0.31
SHISA5-216ENST00000494854 GAPTQ8N292 157 aa13.13□□□□□ -0.31
SHISA5-216ENST00000494854 OR10J5Q8NHC4 309 aa13.13□□□□□ -0.31
SHISA5-216ENST00000494854 LHFPL5Q8TAF8 219 aa13.13□□□□□ -0.31
SHISA5-216ENST00000494854 TLNRD1Q9H1K6 362 aa13.13□□□□□ -0.31
SHISA5-216ENST00000494854 MSL2Q9HCI7 577 aa13.13□□□□□ -0.31
SHISA5-216ENST00000494854 A6NLC8 198 aa13.13□□□□□ -0.31
SHISA5-216ENST00000494854 M0R1B8 84 aa13.13□□□□□ -0.31
SHISA5-216ENST00000494854 HAND1O96004 215 aa13.13□□□□□ -0.31
SHISA5-216ENST00000494854 P2RX3P56373 397 aa13.13□□□□□ -0.31
SHISA5-216ENST00000494854 SMCO1Q147U7 214 aa13.13□□□□□ -0.31
SHISA5-216ENST00000494854 PRAMEF6Q5VXH4 476 aa13.13□□□□□ -0.31
SHISA5-216ENST00000494854 STOML3Q8TAV4 291 aa13.13□□□□□ -0.31
SHISA5-216ENST00000494854 KIRREL1Q96J84 757 aa13.13□□□□□ -0.31
SHISA5-216ENST00000494854 JKAMPQ9P055 326 aa13.13□□□□□ -0.31
SHISA5-216ENST00000494854 OR14J1Q9UGF5 321 aa13.13□□□□□ -0.31
SHISA5-216ENST00000494854 PFDN2Q9UHV9 154 aa13.13□□□□□ -0.31
SHISA5-216ENST00000494854 POLQO75417 2590 aa13.12□□□□□ -0.31
SHISA5-216ENST00000494854 HSD17B6O14756 317 aa13.12□□□□□ -0.31
SHISA5-216ENST00000494854 DEDDO75618 318 aa13.12□□□□□ -0.31
SHISA5-216ENST00000494854 SRPXP78539 464 aa13.12□□□□□ -0.31
SHISA5-216ENST00000494854 SNTB1Q13884 538 aaKnown RBP13.12□□□□□ -0.31
SHISA5-216ENST00000494854 FAM74A1Q5RGS3 127 aa13.12□□□□□ -0.31
SHISA5-216ENST00000494854 ALKBH2Q6NS38 261 aa13.12□□□□□ -0.31
SHISA5-216ENST00000494854 H1FOOQ8IZA3 346 aaPredicted RBP13.12□□□□□ -0.31
SHISA5-216ENST00000494854 RNASE6Q93091 150 aaKnown RBP13.12□□□□□ -0.31
SHISA5-216ENST00000494854 MUCL1Q96DR8 90 aa13.12□□□□□ -0.31
SHISA5-216ENST00000494854 LURAP1Q96LR2 239 aa13.12□□□□□ -0.31
SHISA5-216ENST00000494854 REG4Q9BYZ8 158 aa13.12□□□□□ -0.31
SHISA5-216ENST00000494854 SHARPINQ9H0F6 387 aa13.12□□□□□ -0.31
SHISA5-216ENST00000494854 TMEM222Q9H0R3 208 aa13.12□□□□□ -0.31
SHISA5-216ENST00000494854 CCL28Q9NRJ3 127 aa13.12□□□□□ -0.31
SHISA5-216ENST00000494854 CYTL1Q9NRR1 136 aa13.12□□□□□ -0.31
SHISA5-216ENST00000494854 SDHAF2Q9NX18 166 aa13.12□□□□□ -0.31
SHISA5-216ENST00000494854 TRAPPC2LQ9UL33 140 aa13.12□□□□□ -0.31
SHISA5-216ENST00000494854 OR2W1Q9Y3N9 320 aa13.12□□□□□ -0.31
SHISA5-216ENST00000494854 TMED3Q9Y3Q3 217 aa13.12□□□□□ -0.31
SHISA5-216ENST00000494854 LSM5Q9Y4Y9 91 aaKnown RBP13.12□□□□□ -0.31
SHISA5-216ENST00000494854 ARID1AO14497 2285 aa13.11□□□□□ -0.31
SHISA5-216ENST00000494854 A0A1B0GWJ7 208 aa13.11□□□□□ -0.31
SHISA5-216ENST00000494854 WNT9BO14905 357 aa13.11□□□□□ -0.31
SHISA5-216ENST00000494854 SCGB1D2O95969 90 aa13.11□□□□□ -0.31
SHISA5-216ENST00000494854 TPT1P13693 172 aaKnown RBP13.11□□□□□ -0.31
SHISA5-216ENST00000494854 CEBPDP49716 269 aaPredicted RBP13.11□□□□□ -0.31
SHISA5-216ENST00000494854 TLE4Q04727 773 aa13.11□□□□□ -0.31
SHISA5-216ENST00000494854 C3orf36Q3SXR2 165 aa13.11□□□□□ -0.31
SHISA5-216ENST00000494854 TMEM268Q5VZI3 342 aa13.11□□□□□ -0.31
SHISA5-216ENST00000494854 WDR82Q6UXN9 313 aa13.11□□□□□ -0.31
SHISA5-216ENST00000494854 SLC35G3Q8N808 338 aa13.11□□□□□ -0.31
SHISA5-216ENST00000494854 RBPMSQ93062 196 aaKnown RBP13.11□□□□□ -0.31
SHISA5-216ENST00000494854 TAAR3PQ9P1P4 343 aa13.11□□□□□ -0.31
SHISA5-216ENST00000494854 GLS2Q9UI32 602 aa13.11□□□□□ -0.31
SHISA5-216ENST00000494854 UBE2J1Q9Y385 318 aaPredicted RBP13.11□□□□□ -0.31
SHISA5-216ENST00000494854 SPG11Q96JI7 2443 aa13.11□□□□□ -0.31
SHISA5-216ENST00000494854 TRAV39A0A0B4J263 110 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms